Cellulosome Database Gene Detail

PaGL#43_05054 Locus tags: • Sequence Length: 927

Variovorax paradoxus, SPNA7 Batch3_genome_fasta/V.paradoxus.SPNA7

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    [SP]_[PF13954]_[PF00577]_[PF13953]_[TM]

    [SP]_[37:PF13954]_[225:PF00577]_[790:PF13953]_[TM]

    [SP]_[37:IPR025885]_[60:IPR037224]_[225:IPR000015]_[790:IPR025949]_[TM]

Looking for similar signatures in the working genomes

PF13954:PapC_N. PapC N-terminal domain

Found 3 similar signatures

Variovorax sp., EBFNA2	PaGL#33_00637	42-187
	PaGL#33_03162	46-197
Variovorax paradoxus, SPNA7	PaGL#43_05054	37-183

PF00577:Usher. Outer membrane usher protein

Found 7 similar signatures

Variovorax sp., EBFNA2	PaGL#33_00637	229-785
	PaGL#33_03162	215-765
	PaGL#33_04174	194-708
	PaGL#33_04965	165-688
Variovorax paradoxus, 2u118	PaGL#32_01940	212-704
Variovorax paradoxus, SPNA7	PaGL#43_02019	213-704
	PaGL#43_05054	225-782

PF13953:PapC_C. PapC C-terminal domain

Found 6 similar signatures

Variovorax sp., EBFNA2	PaGL#33_00637	793-858
	PaGL#33_03162	774-839
	PaGL#33_04174	727-787
Variovorax paradoxus, 2u118	PaGL#32_01940	721-781
Variovorax paradoxus, SPNA7	PaGL#43_02019	721-781
	PaGL#43_05054	790-855

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