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KDFAKKPF_00566 Locus tags: • Sequence Length: 360

Paenibacillus guangzhouensis, KCTC 33171 GCF_009363075.1

5050100100150150200200250250300300350350400400
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KDFAKKPF_00562 KDFAKKPF_00563 KDFAKKPF_00566 KDFAKKPF_00567 KDFAKKPF_00570 KDFAKKPF_00571
    [PF03444]_[PF01628]

    [0:PF03444]_[103:PF01628]

    [0:IPR005104]_[0:IPR036390]_[103:IPR021153]
    

Looking for similar signatures in the working genomes

PF03444:HrcA_DNA-bdg. Winged helix-turn-helix transcription repressor, HrcA DNA-binding

Found 16 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_010964592.1:FHOCHPCF_013347-72
Pseudobacteroides cellulosolvens, DSM 2933 WP_036947002.1:NEIHKHHH_020794-74
Ruminococcus albus_7, DSM 20455 WP_013483906.1:HCIAFFOI_040616-69
Paenibacillus guangzhouensis, KCTC 33171 WP_152392124.1:KDFAKKPF_005660-72
Clostridium acetobutylicum, ATCC 824 WP_010964592.1:OJAMHIDJ_013387-72
Variovorax sp., EBFNA2 PaGL#33_050393-73
Variovorax paradoxus, 2u118 PaGL#32_043763-73
Variovorax paradoxus, SPNA7 PaGL#43_045413-73
Methanospirillum lacunae, Ki8-1 MLKi8_007871-78
Fictibacillus phosphorivorans, TY7 PaGL#38_031259-80
Methanospirillum hungatei, GP1 MhGP1_012621-78
Methanospirillum stamsii, Pt1 MLKi8_015501-78
Sphingomonas sp., CR2A3 PaGL#62_033137-76
Methanospirillum.hungatei GP1, MhGP1 8064048304:MhGP1_016411-78
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11500:Mhun_004981-78
Ruminococcus callidus, ATCC 27760 Rcal_028634-72

PF01628:HrcA. HrcA protein C terminal domain

Found 41 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517022.1:LOMAGDGF_00966105-325
Clostridium acetobutylicum, DSM 1731 WP_010964592.1:FHOCHPCF_01334105-323
Acetivibrio alkalicellulosi, DSM 17461 2510063677:NJMEOJLD_03855105-325
Pseudobacteroides cellulosolvens, DSM 2933 WP_036947002.1:NEIHKHHH_02079105-325
Ruminococcus albus_7, DSM 20455 WP_013483906.1:HCIAFFOI_04061101-314
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111686:GJLLLGJL_01655104-322
Paenibacillus guangzhouensis, KCTC 33171 WP_152392124.1:KDFAKKPF_00566103-324
Clostridium acetobutylicum, ATCC 824 WP_010964592.1:OJAMHIDJ_01338105-323
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696225.1:PROKKA_01804105-327
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00309104-321
FD_YE_37_9_2, AnGL4 AnGL4_00132103-326
Syntrophomonas curvata, Scurva Scurva_02132105-321
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00696104-321
Syntrophomonas wolfei methylbutyratica, Swm Swm_01856104-322
Terrisporobacter hibernicus, AnGL54 AnGL54_02397104-325
Paraclostridium benzoelyticum, AnGL27 AnGL27_01337105-325
FD-YE-37-9-3, AnGL29 AnGL29_00857103-326
Methylobacterium radiotolerans, GTSA1 PaGL#34_03196123-346
Syntrophomonas erecta, GB-438 Ga0610585_00309104-321
Variovorax sp., EBFNA2 PaGL#33_0503996-317
Variovorax paradoxus, 2u118 PaGL#32_0437697-318
Dietzia cinnamea, 55 PaGL#56_01140104-329
Exiguobacterium mexicanum, AnGL24 AnGL24_01935104-321
Clostridium subterminale, CB-LS10-1 AnGL53_01235106-326
Priestia megaterium, 10L1 PaGL#57_02983103-322
Variovorax paradoxus, SPNA7 PaGL#43_0454197-318
Geodermatophilus sp., RDM14 PaGL#36_01540104-319
Methylorubrum populi, CTY4 PaGL#39_00342129-352
Fictibacillus phosphorivorans, TY7 PaGL#38_03125113-331
Syntrophomonas wolfei, saponavida Swsap_02040104-321
Bacillus subtilis, 30VD-1 PaGL#66_01740103-323
Peribacillus frigoritolerans, 30N-5 PaGL#67_02145103-322
Micromonospora inositola, Utrum1 PaGL#61_05750103-323
Sphingomonas sp., CR2A3 PaGL#62_03313109-332
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_03201104-325
Niallia taxi, AG-1 PaGL#37_02741103-322
MPOB, Sfum 639701798:Sfum_01072106-328
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10159:Spalm_00057105-321
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111686:Swol_01655104-322
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14029:Szehn_02326105-321
Ruminococcus callidus, ATCC 27760 Rcal_02863105-318
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