SMPP Home

PaGL#36_01860 Locus tags: • Sequence Length: 638

Geodermatophilus sp., RDM14 Batch4_genome_fasta/bc2014

5050100100150150200200250250300300350350400400450450500500550550600600650650
Show complete sequence
Click domain (colored bar) to show sequence
unknown PaGL#36_01857 PaGL#36_01860 PaGL#36_01861 PaGL#36_01863 PaGL#36_01864 PaGL#36_01865 
    [PF00929]_[PF01541]

    [35:PF00929]_[236:PF01541]

    [28:IPR012337]_[33:IPR013520]_[35:IPR013520]_[233:IPR000305]_[234:IPR000305]_[235:IPR035901]_[236:IPR000305]

Looking for similar signatures in the working genomes

PF00929:RNase_T. Exonuclease

Found 159 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515548.1:LOMAGDGF_01263429-584
WP_003518004.1:LOMAGDGF_017724-169
Clostridium acetobutylicum, DSM 1731 WP_010964056.1:FHOCHPCF_007844-155
WP_010966712.1:FHOCHPCF_03496429-583
Acetivibrio alkalicellulosi, DSM 17461 2510060760:NJMEOJLD_0100271-228
2510063817:NJMEOJLD_03992417-571
2510063985:NJMEOJLD_0415716-169
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945279.1:NEIHKHHH_0219031-200
WP_036935050.1:NEIHKHHH_05036429-583
Ruminococcus albus_7, DSM 20455 WP_013499788.1:HCIAFFOI_03312127-290
WP_013483321.1:HCIAFFOI_0341025-182
WP_013483765.1:HCIAFFOI_038984-157
WP_013498767.1:HCIAFFOI_02187449-604
Paenibacillus guangzhouensis, KCTC 33171 WP_152392508.1:KDFAKKPF_01017421-571
WP_152393919.1:KDFAKKPF_026344-159
WP_152394372.1:KDFAKKPF_0316863-221
Clostridium acetobutylicum, ATCC 824 WP_010964056.1:OJAMHIDJ_007874-155
WP_010966712.1:OJAMHIDJ_03508429-583
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698928.1:PROKKA_03598425-579
FD_25_22, AnGL7 AnGL7_003916-168
AnGL7_0050836-203
AnGL7_0053850-214
AnGL7_0135914-189
AnGL7_013739-190
AnGL7_018417-163
AnGL7_0254251-215
AnGL7_0357449-220
FD_25_27, AnGL8 AnGL8_000048-189
AnGL8_0193721-197
AnGL8_0093853-216
AnGL8_0097449-220
AnGL8_0249113-180
FD_MS_7_1, AnGL28 AnGL28_002973-153
AnGL28_0136215-179
AnGL28_0283711-194
FD_SO4_25_1_F22, AnGL30 AnGL30_002769-165
AnGL30_005704-158
FD_SO4_37_1, AnGL2 AnGL2_0049115-179
AnGL2_0196611-194
AnGL2_029763-153
FD_YE_25_21, AnGL21 AnGL21_0295430-193
AnGL21_035829-165
AnGL21_002318-170
AnGL21_0073812-180
AnGL21_0083119-195
AnGL21_0126410-191
AnGL21_01641122-275
AnGL21_017186-171
AnGL21_0173448-219
AnGL21_0274751-214
AnGL21_0338861-225
FD_YE_37_3, AnGL26 AnGL26_006289-165
AnGL26_033233-157
FD_YE_37_8_2, AnGL3 AnGL3_030325-156
AnGL3_033979-165
FD_YE_37_9_2, AnGL4 AnGL4_007948-163
AnGL4_03194423-577
Terrisporobacter hibernicus, AnGL54 AnGL54_043363-157
AnGL54_043804-178
AnGL54_043864-161
AnGL54_0079313-164
AnGL54_019684-176
AnGL54_02000417-572
FD-25-21, AnGL21 AnGL21_0012051-215
AnGL21_006867-163
AnGL21_011799-190
AnGL21_0119514-189
AnGL21_0145550-221
AnGL21_016464-169
AnGL21_0209050-214
AnGL21_0212036-203
AnGL21_022386-168
AnGL21_0269949-220
Sunxiuqinia elliptica, AnGL22 AnGL22_006299-165
AnGL22_033193-157
Paraclostridium benzoelyticum, AnGL27 AnGL27_014114-178
AnGL27_014175-162
AnGL27_01553419-574
AnGL27_029744-178
FD-MS-7-8, AnGL9 AnGL9_004443-153
AnGL9_016659-173
AnGL9_0302612-195
FD-YE-37-9-3, AnGL29 AnGL29_00452423-577
AnGL29_015198-163
Methylobacterium radiotolerans, GTSA1 PaGL#34_001124-156
PaGL#34_047274-167
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_029163-157
PaGL#35_0503710-165
Variovorax sp., EBFNA2 PaGL#33_028955-187
PaGL#33_037614-166
PaGL#33_0464323-185
Variovorax paradoxus, 2u118 PaGL#32_0146823-185
PaGL#32_021554-166
PaGL#32_029275-187
Dietzia cinnamea, 55 PaGL#56_004024-159
PaGL#56_0105827-191
PaGL#56_0122538-196
PaGL#56_0184646-219
PaGL#56_0187017-174
Exiguobacterium mexicanum, AnGL24 AnGL24_01305410-566
AnGL24_013734-161
AnGL24_016776-159
Clostridium subterminale, CB-LS10-1 AnGL53_01161431-585
AnGL53_021573-132
AnGL53_0302447-198
Priestia megaterium, 10L1 PaGL#57_01087304-430
PaGL#57_025987-171
PaGL#57_015025-173
PaGL#57_03393421-576
PaGL#57_049957-177
PaGL#57_0514410-165
PaGL#57_060555-162
Variovorax paradoxus, SPNA7 PaGL#43_0146723-185
PaGL#43_024154-166
PaGL#43_029795-187
Methanospirillum lacunae, Ki8-1 MLKi8_0252620-199
MLKi8_033486-173
Geodermatophilus sp., RDM14 PaGL#36_013548-172
PaGL#36_0186035-193
Methylorubrum populi, CTY4 PaGL#39_002753-156
PaGL#39_013364-167
Fictibacillus phosphorivorans, TY7 PaGL#38_0148159-217
PaGL#38_02317419-574
PaGL#38_027765-162
PaGL#38_036693-166
Methanospirillum hungatei, GP1 MhGP1_024323-181
Methanospirillum stamsii, Pt1 MLKi8_0249432-212
Bacillus subtilis, 30VD-1 PaGL#66_011646-173
PaGL#66_020586-162
PaGL#66_02472438-595
Peribacillus frigoritolerans, 30N-5 PaGL#67_007347-174
PaGL#67_024295-161
PaGL#67_029456-166
PaGL#67_03942425-580
Micromonospora inositola, Utrum1 PaGL#61_015010-158
PaGL#61_0540743-201
Sphingomonas sp., CR2A3 PaGL#62_020619-92
PaGL#62_026593-163
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0397013-164
AnGL54_011653-157
AnGL54_012094-178
AnGL54_012154-161
AnGL54_027714-176
AnGL54_02803417-572
Niallia taxi, AG-1 PaGL#37_01446425-580
PaGL#37_0222758-214
PaGL#37_024895-162
PaGL#37_032217-174
PaGL#37_036964-158
Methanospirillum.hungatei GP1, MhGP1 8064047105:MhGP1_004713-181
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111531:Mhun_015323-181
Syntrophus aciditrophicus, SB 637861094:SYN_0258133-72
Syntrophus gentianae, DSM8423 Ga0074853_1325:Sgen_0290717-175
Mucilaginibacter gossypii, cycad 4 PaGL#42_007906-181
PaGL#42_0097910-165
PaGL#42_027093-157
Ruminococcus callidus, ATCC 27760 Rcal_00712132-289
Rcal_01184429-585
Rcal_027935-175

PF01541:GIY-YIG. GIY-YIG catalytic domain

Found 138 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514317.1:LOMAGDGF_0034014-91
Clostridium acetobutylicum, DSM 1731 WP_010963830.1:FHOCHPCF_0055314-91
WP_010966736.1:FHOCHPCF_0352214-87
Acetivibrio alkalicellulosi, DSM 17461 2510059760:NJMEOJLD_0002414-91
2510059925:NJMEOJLD_0018732-129
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939711.1:NEIHKHHH_002403-84
WP_036937209.1:NEIHKHHH_0445014-91
Ruminococcus albus_7, DSM 20455 WP_013483968.1:HCIAFFOI_0412536-105
WP_013499076.1:HCIAFFOI_0253125-101
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11278:GJLLLGJL_0026812-89
GJLLLGJL_025476-76
Paenibacillus guangzhouensis, KCTC 33171 WP_152396023.1:KDFAKKPF_0514637-111
WP_152396234.1:KDFAKKPF_0538622-104
WP_152396858.1:KDFAKKPF_0612125-100
Clostridium acetobutylicum, ATCC 824 WP_010963830.1:OJAMHIDJ_0055414-91
WP_010966736.1:OJAMHIDJ_0353414-87
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698011.1:PROKKA_0077314-91
Syntrophomonas erecta, DSM 16215 OINOEOOJ_018391-73
OINOEOOJ_0200712-89
FD_25_22, AnGL7 AnGL7_002491-69
AnGL7_0105216-91
AnGL7_01641309-383
FD_25_27, AnGL8 AnGL8_0099815-91
AnGL8_030096-77
FD_MS_7_1, AnGL28 AnGL28_0226723-102
FD_SO4_25_1_F22, AnGL30 AnGL30_0105740-115
FD_SO4_37_1, AnGL2 AnGL2_0139623-102
FD_YE_25_21, AnGL21 AnGL21_0442712-82
AnGL21_0180517-93
FD_YE_37_3, AnGL26 AnGL26_013152-74
AnGL26_018942-62
AnGL26_0204223-99
AnGL26_034225-77
FD_YE_37_8_2, AnGL3 AnGL3_005321-74
AnGL3_0206723-98
FD_YE_37_9_2, AnGL4 AnGL4_008875-78
AnGL4_0090314-91
Syntrophus buswellii, Sbus Sbus_019145-77
Sbus_0219816-91
Syntrophomonas curvata, Scurva Scurva_0032412-89
Scurva_005331-72
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0156512-89
Sespor_017981-73
Syntrophomonas wolfei methylbutyratica, Swm Swm_0024216-93
Swm_029346-76
Terrisporobacter hibernicus, AnGL54 AnGL54_0133914-89
AnGL54_015560-73
AnGL54_0248611-85
AnGL54_0293914-91
FD-25-21, AnGL21 AnGL21_00858171-266
AnGL21_009376-78
AnGL21_0150416-91
Sunxiuqinia elliptica, AnGL22 AnGL22_013172-74
AnGL22_018912-62
AnGL22_0203923-99
AnGL22_034185-77
Paraclostridium benzoelyticum, AnGL27 AnGL27_0091014-91
AnGL27_011551-87
AnGL27_0219973-149
AnGL27_027090-73
FD-MS-7-8, AnGL9 AnGL9_0236417-96
FD-YE-37-9-3, AnGL29 AnGL29_016125-78
AnGL29_0162814-91
Methylobacterium radiotolerans, GTSA1 PaGL#34_0585168-141
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_004025-80
PaGL#35_0129916-93
PaGL#35_02916198-267
Syntrophomonas erecta, GB-438 Ga0610585_018391-73
Ga0610585_0200712-89
Variovorax sp., EBFNA2 PaGL#33_0035252-121
PaGL#33_0211420-95
Variovorax paradoxus, 2u118 PaGL#32_0094812-81
PaGL#32_0176520-95
PaGL#32_018065-89
Dietzia cinnamea, 55 PaGL#56_0163617-92
Maridesulfovibrio salexigens, AnGL23 AnGL23_009103-73
AnGL23_0128913-90
Exiguobacterium mexicanum, AnGL24 AnGL24_0096817-92
AnGL24_030433-75
Clostridium subterminale, CB-LS10-1 AnGL53_003081-71
AnGL53_0314114-91
Priestia megaterium, 10L1 PaGL#57_022075-74
PaGL#57_0282415-90
PaGL#57_0546529-90
PaGL#57_06278273-361
Variovorax paradoxus, SPNA7 PaGL#43_0093812-81
PaGL#43_0175320-95
Methanospirillum lacunae, Ki8-1 MLKi8_0295611-86
Geodermatophilus sp., RDM14 PaGL#36_01860236-311
PaGL#36_0282218-92
Methylorubrum populi, CTY4 PaGL#39_0258960-133
PaGL#39_044673-74
Fictibacillus phosphorivorans, TY7 PaGL#38_004226-77
PaGL#38_0348914-89
Methanospirillum hungatei, GP1 MhGP1_0290711-87
Methanospirillum stamsii, Pt1 MLKi8_0350311-87
Syntrophomonas wolfei, saponavida Swsap_0137514-91
Swsap_0174811-81
Bacillus subtilis, 30VD-1 PaGL#66_001485-76
PaGL#66_0104742-117
PaGL#66_0149115-90
Peribacillus frigoritolerans, 30N-5 PaGL#67_002354-77
PaGL#67_0079243-117
PaGL#67_0192015-90
PaGL#67_0193917-113
Micromonospora inositola, Utrum1 PaGL#61_0519818-92
PaGL#61_05407244-319
Sphingomonas sp., CR2A3 PaGL#62_0181645-120
PaGL#62_020039-83
PaGL#62_021066-79
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0206614-89
AnGL54_023620-73
AnGL54_0329011-85
AnGL54_0374214-91
Niallia taxi, AG-1 PaGL#37_0004316-86
PaGL#37_05533183-266
PaGL#37_0292315-90
PaGL#37_0368817-113
Methanospirillum.hungatei GP1, MhGP1 8064049935:MhGP1_0323911-87
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112090:Mhun_0208912-88
MPOB, Sfum Sfum_01301135-212
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10385:Spalm_006101-73
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11278:Swol_0026812-89
Swol_025476-76
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_15329:Szehn_027271-75
Ga0124040_14231:Szehn_0237614-91
Syntrophus aciditrophicus, SB 637859018:SYN_0066517-92
637859367:SYN_009842-76
Syntrophus gentianae, DSM8423 Ga0074853_11610:Sgen_020963-76
Ga0074853_11946:Sgen_0235816-91
Mucilaginibacter gossypii, cycad 4 PaGL#42_007885-80
PaGL#42_02709198-266
PaGL#42_030736-78
PaGL#42_0401817-94
PaGL#42_043977-77
PaGL#42_043981-72
Ruminococcus callidus, ATCC 27760 Rcal_0160519-95
Rcal_026802-74
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA