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PaGL#36_02943 Locus tags: • Sequence Length: 718

Geodermatophilus sp., RDM14 Batch4_genome_fasta/bc2014

5050100100150150200200250250300300350350400400450450500500550550600600650650700700750750
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PaGL#36_02938 PaGL#36_02939 PaGL#36_02942 PaGL#36_02943 PaGL#36_02945 PaGL#36_02946 PaGL#36_02947 
    [PF02629]_[PF13607]_[PF08442]

    [11:PF02629]_[149:PF13607]_[479:PF08442]

    [4:IPR036291]_[7:IPR003781]_[11:IPR003781]_[146:IPR016102]_[149:IPR032875]_[264:IPR001763]_[293:IPR016102]

Looking for similar signatures in the working genomes

PF02629:CoA_binding. CoA binding domain

Found 207 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003519037.1:LOMAGDGF_0185684-180
WP_003515843.1:LOMAGDGF_0254383-179
WP_003514163.1:LOMAGDGF_028219-123
Clostridium acetobutylicum, DSM 1731 WP_010966000.1:FHOCHPCF_0276481-180
Acetivibrio alkalicellulosi, DSM 17461 2510062945:NJMEOJLD_0313183-179
2510063366:NJMEOJLD_0354910-123
Pseudobacteroides cellulosolvens, DSM 2933 WP_036944043.1:NEIHKHHH_0278888-185
WP_036935712.1:NEIHKHHH_046829-122
Ruminococcus albus_7, DSM 20455 WP_013483406.1:HCIAFFOI_0351480-171
WP_013497940.1:HCIAFFOI_0129582-178
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_0171981-178
Paenibacillus guangzhouensis, KCTC 33171 WP_152392276.1:KDFAKKPF_0074718-134
WP_152392459.1:KDFAKKPF_009645-108
WP_152393918.1:KDFAKKPF_0263380-179
WP_152395703.1:KDFAKKPF_04767189-285
Clostridium acetobutylicum, ATCC 824 WP_010966000.1:OJAMHIDJ_0277281-180
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697575.1:PROKKA_0063485-178
WP_137695972.1:PROKKA_020755-116
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0025581-178
FD_25_22, AnGL7 AnGL7_021225-99
AnGL7_0228912-133
FD_25_27, AnGL8 AnGL8_0150422-140
AnGL8_020765-100
FD_MS_7_1, AnGL28 AnGL28_000115-101
AnGL28_002018-120
AnGL28_0095386-181
AnGL28_0114877-174
FD_SO4_25_1_F22, AnGL30 AnGL30_0066788-183
FD_SO4_37_1, AnGL2 AnGL2_0008386-181
AnGL2_0027877-174
AnGL2_026905-101
AnGL2_028808-120
FD_YE_25_21, AnGL21 AnGL21_0412530-144
AnGL21_008195-99
AnGL21_0320111-137
FD_YE_37_3, AnGL26 AnGL26_012105-99
AnGL26_028812-114
AnGL26_029969-135
FD_YE_37_8_2, AnGL3 AnGL3_001115-99
AnGL3_004324-114
AnGL3_008539-136
AnGL3_0265193-185
FD_YE_37_9_2, AnGL4 AnGL4_0036187-184
Syntrophus buswellii, Sbus Sbus_0001611-135
Sbus_0006913-137
Sbus_0033817-147
Sbus_0070611-133
Sbus_007898-134
Sbus_0113710-135
Sbus_012406-98
Sbus_0148932-158
Sbus_02195257-382
Sbus_022508-131
Sbus_02339265-391
Sbus_024138-135
Sbus_0264011-134
Sbus_0268110-133
Syntrophomonas curvata, Scurva Scurva_0231380-178
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0075081-178
Syntrophomonas wolfei methylbutyratica, Swm Swm_0123721-139
Swm_0194081-178
Terrisporobacter hibernicus, AnGL54 AnGL54_0442110-111
AnGL54_0300580-178
FD-25-21, AnGL21 AnGL21_0031612-133
AnGL21_004205-99
Sunxiuqinia elliptica, AnGL22 AnGL22_012125-99
AnGL22_028782-114
AnGL22_029939-135
Paraclostridium benzoelyticum, AnGL27 AnGL27_0364982-178
FD-MS-7-8, AnGL9 AnGL9_006975-101
AnGL9_0136286-181
AnGL9_0145277-175
FD-YE-37-9-3, AnGL29 AnGL29_0108687-184
Methylobacterium radiotolerans, GTSA1 PaGL#34_010946-99
PaGL#34_0135238-162
PaGL#34_039915-99
PaGL#34_0424212-134
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_058405-99
PaGL#35_064453-115
Syntrophomonas erecta, GB-438 Ga0610585_0025581-178
Variovorax sp., EBFNA2 PaGL#33_0619413-131
PaGL#33_0626313-136
PaGL#33_0656713-132
PaGL#33_0320018-144
PaGL#33_0529214-139
PaGL#33_0535617-143
PaGL#33_059615-102
Variovorax paradoxus, 2u118 PaGL#32_0546713-136
PaGL#32_0064418-144
PaGL#32_0608919-143
PaGL#32_0621313-131
PaGL#32_045205-102
PaGL#32_051715-102
Dietzia cinnamea, 55 PaGL#56_01476244-370
PaGL#56_022645-108
PaGL#56_0272718-132
Maridesulfovibrio salexigens, AnGL23 AnGL23_001748-134
AnGL23_0022313-140
AnGL23_01261409-503
AnGL23_01804312-444
AnGL23_0192016-133
AnGL23_0336783-178
AnGL23_0340813-138
Exiguobacterium mexicanum, AnGL24 AnGL24_0041482-180
AnGL24_012575-100
AnGL24_0160813-129
Clostridium subterminale, CB-LS10-1 AnGL53_003827-121
AnGL53_0048281-179
AnGL53_02322189-284
Priestia megaterium, 10L1 PaGL#57_0200283-179
PaGL#57_033465-99
PaGL#57_0490718-133
Variovorax paradoxus, SPNA7 PaGL#43_0551013-136
PaGL#43_0603116-141
PaGL#43_0615613-132
PaGL#43_0409816-142
PaGL#43_046885-102
PaGL#43_053865-102
Methanospirillum lacunae, Ki8-1 MLKi8_015354-103
MLKi8_02205239-363
MLKi8_02837241-364
Geodermatophilus sp., RDM14 PaGL#36_00259187-270
PaGL#36_02914187-313
PaGL#36_0294311-134
PaGL#36_036996-103
PaGL#36_0386587-182
Methylorubrum populi, CTY4 PaGL#39_014385-99
PaGL#39_015985-99
PaGL#39_0219137-156
PaGL#39_0469812-135
Fictibacillus phosphorivorans, TY7 PaGL#38_0066382-180
PaGL#38_01280467-581
PaGL#38_022665-99
PaGL#38_0273316-131
PaGL#38_042645-98
Methanospirillum hungatei, GP1 MhGP1_017074-103
MhGP1_02822239-363
MhGP1_03072241-364
Methanospirillum stamsii, Pt1 MLKi8_00259241-364
MLKi8_021214-103
MLKi8_03313239-363
Syntrophomonas wolfei, saponavida Swsap_015639-121
Swsap_0199181-178
Swsap_0230722-137
Bacillus subtilis, 30VD-1 PaGL#66_0231516-131
PaGL#66_025205-99
PaGL#66_0357882-178
Peribacillus frigoritolerans, 30N-5 PaGL#67_033658-123
PaGL#67_039935-99
PaGL#67_0536782-179
Micromonospora inositola, Utrum1 PaGL#61_0086912-94
PaGL#61_01857191-317
PaGL#61_0335525-148
PaGL#61_0337219-136
PaGL#61_062805-103
PaGL#61_0654499-194
Sphingomonas sp., CR2A3 PaGL#62_0055710-136
PaGL#62_0302416-133
PaGL#62_030305-99
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0125010-111
AnGL54_0380880-178
Niallia taxi, AG-1 PaGL#37_0035883-180
PaGL#37_013955-99
PaGL#37_0202418-133
Methanospirillum.hungatei GP1, MhGP1 8064046705:MhGP1_00081239-363
8064047847:MhGP1_011964-103
8064049765:MhGP1_03074241-364
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11932:Mhun_009314-103
Ga0065338_111448:Mhun_01448239-363
Ga0065338_112422:Mhun_02420240-364
MPOB, Sfum 639701470:Sfum_007367-134
639702058:Sfum_0133423-135
639702370:Sfum_0165281-180
639702471:Sfum_017505-99
639702734:Sfum_0202210-137
639703232:Sfum_0253313-139
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_101119:Spalm_0011670-167
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_0171981-178
Syntrophomonas zehnderi, OL-4 Szehn Szehn_0186980-178
Syntrophus aciditrophicus, SB SYN_000206-98
637858761:SYN_0042010-134
637858763:SYN_004227-134
637859111:SYN_00747284-410
637859378:SYN_009978-133
637860278:SYN_0184611-135
637860402:SYN_0196213-137
637860516:SYN_02066294-419
637860538:SYN_020858-131
637860763:SYN_022935-99
637860783:SYN_0230733-148
Syntrophus gentianae, DSM8423 Ga0074853_1445:Sgen_0320811-135
Ga0074853_12112:Sgen_024528-134
Ga0074853_10721:Sgen_0118510-135
Ga0074853_13323:Sgen_0294610-135
Ga0074853_10633:Sgen_0102714-137
Ga0074853_10138:Sgen_000377-131
Ga0074853_11943:Sgen_02355257-382
Sgen_0172431-157
Ga0074853_10179:Sgen_0007810-132
Ga0074853_10687:Sgen_010818-135
Ga0074853_10578:Sgen_008986-98
Ga0074853_10688:Sgen_010827-135
Ga0074853_106159:Sgen_01153265-391
Ga0074853_102198:Sgen_0040517-147
Mucilaginibacter gossypii, cycad 4 PaGL#42_000153-116
PaGL#42_059275-99
Ruminococcus callidus, ATCC 27760 Rcal_0260785-178

PF13607:Succ_CoA_lig. Succinyl-CoA ligase like flavodoxin domain

Found 85 similar signatures
FD_25_22, AnGL7 AnGL7_02289148-286
FD_YE_25_21, AnGL21 AnGL21_03201152-290
FD_YE_37_3, AnGL26 AnGL26_02996153-293
FD_YE_37_8_2, AnGL3 AnGL3_00853153-295
Syntrophus buswellii, Sbus Sbus_00016151-289
Sbus_00069156-295
Sbus_00338163-302
Sbus_00706150-285
Sbus_00789153-288
Sbus_01137151-289
Sbus_01240144-281
Sbus_01489176-306
Sbus_02195400-537
Sbus_02250153-290
Sbus_02339407-544
Sbus_02413152-290
Sbus_02640151-290
Sbus_02681152-289
Syntrophomonas wolfei methylbutyratica, Swm Swm_01237160-298
FD-25-21, AnGL21 AnGL21_00316148-286
Sunxiuqinia elliptica, AnGL22 AnGL22_02993153-293
Methylobacterium radiotolerans, GTSA1 PaGL#34_04242151-289
Variovorax sp., EBFNA2 PaGL#33_06194148-286
PaGL#33_06263158-293
PaGL#33_06567148-286
PaGL#33_02932146-283
PaGL#33_03200164-301
PaGL#33_05292157-294
PaGL#33_05356163-300
Variovorax paradoxus, 2u118 PaGL#32_05467158-293
PaGL#32_00644164-301
PaGL#32_06089164-302
PaGL#32_06213148-286
Dietzia cinnamea, 55 PaGL#56_01476387-518
Maridesulfovibrio salexigens, AnGL23 AnGL23_00174149-287
AnGL23_00223155-293
AnGL23_01804470-604
AnGL23_03408155-295
Variovorax paradoxus, SPNA7 PaGL#43_05510158-293
PaGL#43_06031162-300
PaGL#43_06156148-286
PaGL#43_04098162-299
Methanospirillum lacunae, Ki8-1 MLKi8_02205380-518
MLKi8_02837381-517
Geodermatophilus sp., RDM14 PaGL#36_02914330-465
PaGL#36_02943149-288
Methylorubrum populi, CTY4 PaGL#39_04698151-289
Fictibacillus phosphorivorans, TY7 PaGL#38_04264149-295
Methanospirillum hungatei, GP1 MhGP1_02822380-518
MhGP1_03072381-517
Methanospirillum stamsii, Pt1 MLKi8_00259381-517
MLKi8_03313380-518
Micromonospora inositola, Utrum1 PaGL#61_01857334-464
PaGL#61_03355168-305
PaGL#61_03372157-295
Sphingomonas sp., CR2A3 PaGL#62_00557159-294
Methanospirillum.hungatei GP1, MhGP1 8064046705:MhGP1_00081380-518
8064049765:MhGP1_03074381-517
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111448:Mhun_01448380-518
Ga0065338_112422:Mhun_02420381-517
MPOB, Sfum 639701470:Sfum_00736151-286
639702734:Sfum_02022155-295
639703232:Sfum_02533153-287
Syntrophus aciditrophicus, SB 637858761:SYN_00420151-287
637858763:SYN_00422153-287
637859111:SYN_00747426-563
637859378:SYN_00997154-284
637860278:SYN_01846151-289
637860402:SYN_01962156-295
637860516:SYN_02066437-574
637860538:SYN_02085153-290
Syntrophus gentianae, DSM8423 Ga0074853_1445:Sgen_03208151-290
Ga0074853_12112:Sgen_02452153-288
Ga0074853_10721:Sgen_01185151-290
Ga0074853_13323:Sgen_02946151-290
Ga0074853_10633:Sgen_01027153-288
Ga0074853_10138:Sgen_00037153-290
Ga0074853_11943:Sgen_02355401-537
Sgen_01724175-306
Ga0074853_10179:Sgen_00078152-289
Ga0074853_10687:Sgen_01081152-290
Ga0074853_10578:Sgen_00898144-282
Ga0074853_10688:Sgen_01082152-288
Ga0074853_106159:Sgen_01153407-544
Ga0074853_102198:Sgen_00405163-302

PF08442:ATP-grasp_2. ATP-grasp domain

Found 205 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_010890822.1:FHOCHPCF_03938165-329
WP_010965488.1:FHOCHPCF_02227104-270
Acetivibrio alkalicellulosi, DSM 17461 2510060507:NJMEOJLD_00754110-280
NJMEOJLD_0369922-174
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939014.1:NEIHKHHH_0328899-254
Ruminococcus albus_7, DSM 20455 WP_013497137.1:HCIAFFOI_00406135-208
WP_013497183.1:HCIAFFOI_00459137-262
Paenibacillus guangzhouensis, KCTC 33171 WP_152392458.1:KDFAKKPF_009631-203
WP_152393868.1:KDFAKKPF_02580120-292
WP_152396545.1:KDFAKKPF_05740122-294
Clostridium acetobutylicum, ATCC 824 WP_010965488.1:OJAMHIDJ_02236104-270
WP_010890822.1:OJAMHIDJ_03951165-329
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696978.1:PROKKA_03019141-296
WP_137697460.1:PROKKA_03536183-334
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00209141-283
FD_25_22, AnGL7 AnGL7_01310113-278
AnGL7_01576124-296
AnGL7_021231-203
AnGL7_02289485-706
FD_25_27, AnGL8 AnGL8_00809120-292
AnGL8_020751-202
FD_MS_7_1, AnGL28 AnGL28_000121-206
FD_SO4_25_1_F22, AnGL30 AnGL30_01348144-289
FD_SO4_37_1, AnGL2 AnGL2_026911-206
FD_YE_25_21, AnGL21 AnGL21_008181-203
AnGL21_01259120-292
AnGL21_03104100-274
AnGL21_03201488-704
FD_YE_37_3, AnGL26 AnGL26_012111-194
AnGL26_02207127-299
AnGL26_02996488-684
FD_YE_37_8_2, AnGL3 AnGL3_00853486-683
AnGL3_027471-210
FD_YE_37_9_2, AnGL4 AnGL4_00384112-284
AnGL4_03462135-277
Syntrophus buswellii, Sbus Sbus_00016490-712
Sbus_000702-214
Sbus_003369-229
Sbus_00706473-680
Sbus_00789477-692
Sbus_01137484-705
Sbus_012411-195
Sbus_014881-128
Sbus_0219519-234
Sbus_02250486-698
Sbus_0233923-239
Sbus_02413478-692
Sbus_02640477-699
Sbus_02681468-678
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00796141-283
FD-25-21, AnGL21 AnGL21_00316486-706
AnGL21_004191-203
AnGL21_00980124-296
AnGL21_01259113-278
Sunxiuqinia elliptica, AnGL22 AnGL22_012131-194
AnGL22_02204127-299
AnGL22_02993488-684
FD-MS-7-8, AnGL9 AnGL9_006961-206
FD-YE-37-9-3, AnGL29 AnGL29_00720135-277
AnGL29_01109112-284
Methylobacterium radiotolerans, GTSA1 PaGL#34_00697128-270
PaGL#34_010931-212
PaGL#34_01236117-290
PaGL#34_039922-203
PaGL#34_04242472-697
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_023991-210
PaGL#35_02835114-279
Syntrophomonas erecta, GB-438 Ga0610585_00209141-283
Variovorax sp., EBFNA2 PaGL#33_06194474-697
PaGL#33_06263478-696
PaGL#33_06567474-697
PaGL#33_02932472-694
PaGL#33_03200487-704
PaGL#33_05292489-698
PaGL#33_05356483-698
PaGL#33_05639123-301
PaGL#33_05866123-293
PaGL#33_059621-202
Variovorax paradoxus, 2u118 PaGL#32_05467478-696
PaGL#32_00644487-704
PaGL#32_06089488-700
PaGL#32_06213474-697
PaGL#32_03163126-291
PaGL#32_03176118-266
PaGL#32_045211-202
PaGL#32_04926123-305
PaGL#32_05079120-289
PaGL#32_051721-202
Dietzia cinnamea, 55 PaGL#56_00938124-301
PaGL#56_01476700-906
PaGL#56_022652-194
PaGL#56_02760135-313
Maridesulfovibrio salexigens, AnGL23 AnGL23_00174471-693
AnGL23_00223481-701
AnGL23_012612-191
AnGL23_01292122-294
AnGL23_0180418-286
AnGL23_02673104-288
AnGL23_02971121-280
AnGL23_03408484-706
Exiguobacterium mexicanum, AnGL24 AnGL24_00558105-272
AnGL24_012561-202
Priestia megaterium, 10L1 PaGL#57_01964118-288
PaGL#57_01592118-281
PaGL#57_033451-203
PaGL#57_05071144-296
Variovorax paradoxus, SPNA7 PaGL#43_05510478-696
PaGL#43_06031486-698
PaGL#43_06156474-697
PaGL#43_03216126-291
PaGL#43_03229118-266
PaGL#43_04098486-702
PaGL#43_046891-202
PaGL#43_05112167-345
PaGL#43_05275120-289
PaGL#43_053871-202
Methanospirillum lacunae, Ki8-1 MLKi8_01124100-257
MLKi8_015341-188
MLKi8_022054-216
MLKi8_0221193-250
MLKi8_028372-217
Geodermatophilus sp., RDM14 PaGL#36_02405109-204
PaGL#36_02914647-841
PaGL#36_02943479-678
PaGL#36_03629130-297
PaGL#36_037002-194
Methylorubrum populi, CTY4 PaGL#39_014391-212
PaGL#39_015972-203
PaGL#39_01629102-248
PaGL#39_01703120-293
PaGL#39_04698479-704
Fictibacillus phosphorivorans, TY7 PaGL#38_00707115-285
PaGL#38_022651-203
PaGL#38_042653-193
Methanospirillum hungatei, GP1 MhGP1_01391104-261
MhGP1_017061-186
MhGP1_0281793-252
MhGP1_028224-216
MhGP1_030724-217
Methanospirillum stamsii, Pt1 MLKi8_002592-217
MLKi8_0169872-229
MLKi8_021202-186
MLKi8_0330893-252
MLKi8_033134-217
Bacillus subtilis, 30VD-1 PaGL#66_00530171-333
PaGL#66_025211-203
PaGL#66_03538115-285
PaGL#66_03970114-286
Peribacillus frigoritolerans, 30N-5 PaGL#67_00062118-277
PaGL#67_00788115-286
PaGL#67_039941-203
PaGL#67_05220119-288
Micromonospora inositola, Utrum1 PaGL#61_01157114-286
PaGL#61_01629156-304
PaGL#61_01857628-829
PaGL#61_03355504-711
PaGL#61_03372491-702
PaGL#61_062811-194
Sphingomonas sp., CR2A3 PaGL#62_00557473-692
PaGL#62_02246118-283
PaGL#62_026451-212
Niallia taxi, AG-1 PaGL#37_00406117-287
PaGL#37_013941-202
PaGL#37_01906120-292
Methanospirillum.hungatei GP1, MhGP1 8064046705:MhGP1_000814-216
8064046710:MhGP1_0008693-252
8064047848:MhGP1_011971-186
8064048173:MhGP1_01512104-261
8064049765:MhGP1_030744-217
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11348:Mhun_00346104-261
Ga0065338_11931:Mhun_009301-186
Ga0065338_111448:Mhun_014484-216
Ga0065338_111453:Mhun_0145393-252
Ga0065338_112422:Mhun_024202-217
MPOB, Sfum 639701470:Sfum_00736485-681
639702472:Sfum_017511-202
639702734:Sfum_02022481-702
639703232:Sfum_02533450-666
Syntrophus aciditrophicus, SB 637858318:SYN_000191-196
637858761:SYN_00420482-704
637858763:SYN_00422478-692
637859111:SYN_0074742-258
637859378:SYN_00997482-696
637860278:SYN_01846490-712
637860401:SYN_019612-214
637860516:SYN_0206656-271
637860538:SYN_02085487-698
637860762:SYN_022921-202
Syntrophus gentianae, DSM8423 Ga0074853_1445:Sgen_03208478-699
Ga0074853_12112:Sgen_02452483-691
Ga0074853_10721:Sgen_01185484-706
Ga0074853_13323:Sgen_02946477-699
Ga0074853_10633:Sgen_01027476-684
Ga0074853_10138:Sgen_00037492-698
Ga0074853_11943:Sgen_0235519-234
Sgen_01724509-724
Ga0074853_10179:Sgen_00078468-676
Ga0074853_10577:Sgen_008971-195
Ga0074853_10687:Sgen_01081478-692
Ga0074853_10688:Sgen_01082486-698
Ga0074853_106159:Sgen_0115323-239
Ga0074853_102199:Sgen_004069-229
Mucilaginibacter gossypii, cycad 4 PaGL#42_02463114-279
PaGL#42_0309218-227
Ruminococcus callidus, ATCC 27760 Rcal_02342111-263
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