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PaGL#36_03194 Locus tags: • Sequence Length: 594

Geodermatophilus sp., RDM14 Batch4_genome_fasta/bc2014

5050100100150150200200250250300300350350400400450450500500550550600600
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PaGL#36_03191 PaGL#36_03192 PaGL#36_03193 PaGL#36_03194 PaGL#36_03195 
    [PF12706]_[PF07521]_[PF17770]

    [73:PF12706]_[373:PF07521]_[468:PF17770]

    [22:IPR036866]_[34:IPR001279]_[73:IPR001279]_[373:IPR011108]_[468:IPR041636]

Looking for similar signatures in the working genomes

PF12706:Lactamase_B_2. Beta-lactamase superfamily domain

Found 270 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516144.1:LOMAGDGF_0074128-213
WP_003513908.1:LOMAGDGF_026841-162
WP_003513424.1:LOMAGDGF_0307622-207
Clostridium acetobutylicum, DSM 1731 WP_010890732.1:FHOCHPCF_0384631-212
FHOCHPCF_005275-165
WP_010964639.1:FHOCHPCF_0138330-231
Acetivibrio alkalicellulosi, DSM 17461 2510060807:NJMEOJLD_0104822-217
2510062011:NJMEOJLD_0221928-176
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939514.1:NEIHKHHH_0014418-213
WP_036940551.1:NEIHKHHH_0112081-238
WP_036941424.1:NEIHKHHH_0166324-197
WP_036943563.1:NEIHKHHH_0527035-201
Ruminococcus albus_7, DSM 20455 WP_013497461.1:HCIAFFOI_00768125-321
WP_013497506.1:HCIAFFOI_00827110-306
WP_013498453.1:HCIAFFOI_0185231-272
WP_013499351.1:HCIAFFOI_028534-181
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11361:GJLLLGJL_0034842-241
Ga0065332_112584:GJLLLGJL_025381-161
Ga0065332_112609:GJLLLGJL_0256322-214
Paenibacillus guangzhouensis, KCTC 33171 WP_152392568.1:KDFAKKPF_0108349-229
WP_152393737.1:KDFAKKPF_0243434-198
WP_152394413.1:KDFAKKPF_032111-191
WP_152395137.1:KDFAKKPF_0406373-269
WP_152395187.1:KDFAKKPF_041152-208
WP_152395879.1:KDFAKKPF_0498997-292
Clostridium acetobutylicum, ATCC 824 OJAMHIDJ_005285-165
WP_010964639.1:OJAMHIDJ_0138730-231
WP_010890732.1:OJAMHIDJ_0385931-212
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695935.1:PROKKA_021132-164
WP_137698610.1:PROKKA_0364022-217
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0044328-214
OINOEOOJ_0228422-205
OINOEOOJ_023021-162
FD_25_22, AnGL7 AnGL7_01297125-321
AnGL7_0201753-275
AnGL7_0328941-282
AnGL7_0329941-282
FD_25_27, AnGL8 AnGL8_0200941-282
AnGL8_0102960-130
AnGL8_010301-71
AnGL8_0296241-280
FD_MS_7_1, AnGL28 AnGL28_0016746-228
AnGL28_0106223-206
FD_SO4_25_1_F22, AnGL30 AnGL30_0211245-223
AnGL30_0212048-233
AnGL30_0213033-153
FD_SO4_37_1, AnGL2 AnGL2_0019223-206
AnGL2_0284646-228
FD_YE_25_21, AnGL21 AnGL21_0393241-282
AnGL21_0199292-286
FD_YE_37_3, AnGL26 AnGL26_0108631-213
AnGL26_0152426-207
AnGL26_0325124-219
AnGL26_03296122-319
AnGL26_0335534-155
AnGL26_0388952-230
FD_YE_37_8_2, AnGL3 AnGL3_0015132-271
AnGL3_0026947-226
AnGL3_02462840-1059
FD_YE_37_9_2, AnGL4 AnGL4_0244930-266
AnGL4_02679103-282
AnGL4_0339124-199
Syntrophus buswellii, Sbus Sbus_0005938-239
Sbus_0086745-102
Sbus_0111631-213
Sbus_01682128-317
Sbus_02546232-308
Syntrophomonas curvata, Scurva Scurva_0241842-241
Scurva_028912-161
Scurva_0290121-204
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0056028-214
Sespor_012151-162
Sespor_0123322-205
Syntrophomonas wolfei methylbutyratica, Swm Swm_0039942-241
Swm_029231-161
Swm_0295122-214
Terrisporobacter hibernicus, AnGL54 AnGL54_0000141-192
AnGL54_020421-123
AnGL54_0243730-194
AnGL54_0313722-206
FD-25-21, AnGL21 AnGL21_01273125-321
AnGL21_02963105-283
AnGL21_0297341-282
Sunxiuqinia elliptica, AnGL22 AnGL22_0108831-213
AnGL22_0152626-207
AnGL22_0324724-219
AnGL22_03292122-319
AnGL22_0335134-155
AnGL22_0388552-230
Paraclostridium benzoelyticum, AnGL27 AnGL27_0058922-207
FD-MS-7-8, AnGL9 AnGL9_0052746-228
AnGL9_0130523-207
FD-YE-37-9-3, AnGL29 AnGL29_0064924-199
AnGL29_0317430-266
AnGL29_03404103-282
Methylobacterium radiotolerans, GTSA1 PaGL#34_0068650-266
PaGL#34_0122052-251
PaGL#34_0176451-235
PaGL#34_0226335-165
PaGL#34_03927109-311
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0025619-191
PaGL#35_0155082-279
PaGL#35_01708114-311
PaGL#35_0252224-221
PaGL#35_036172-180
PaGL#35_0447925-206
PaGL#35_0514945-225
Syntrophomonas erecta, GB-438 Ga0610585_0044328-214
Ga0610585_0228422-205
Ga0610585_023021-162
Variovorax sp., EBFNA2 PaGL#33_0609650-277
PaGL#33_0196349-273
PaGL#33_0223827-207
PaGL#33_02252126-321
PaGL#33_0595626-223
Variovorax paradoxus, 2u118 PaGL#32_0573350-277
PaGL#32_064995-78
PaGL#32_065008-114
PaGL#32_0315152-274
PaGL#32_03522127-320
PaGL#32_0353327-208
PaGL#32_0516626-222
Dietzia cinnamea, 55 PaGL#56_0048952-168
PaGL#56_0103431-227
PaGL#56_01742251-362
PaGL#56_0309744-220
Maridesulfovibrio salexigens, AnGL23 AnGL23_0076075-276
AnGL23_012904-189
AnGL23_0196461-163
AnGL23_02292117-311
AnGL23_02893239-393
AnGL23_035346-172
AnGL23_0371128-214
Exiguobacterium mexicanum, AnGL24 AnGL24_0007425-218
AnGL24_00905112-308
AnGL24_0091268-264
AnGL24_01805200-266
AnGL24_018131-191
AnGL24_0251918-215
Clostridium subterminale, CB-LS10-1 AnGL53_001632-162
AnGL53_0290029-283
AnGL53_0293247-247
Priestia megaterium, 10L1 PaGL#57_0229224-218
PaGL#57_027663-192
PaGL#57_0411818-216
PaGL#57_0504747-228
PaGL#57_0682630-211
Variovorax paradoxus, SPNA7 PaGL#43_0574250-277
PaGL#43_0320452-274
PaGL#43_03561127-320
PaGL#43_0357227-208
PaGL#43_0538126-222
Methanospirillum lacunae, Ki8-1 MLKi8_0028461-140
MLKi8_0049246-220
MLKi8_0193523-221
MLKi8_0223941-180
MLKi8_0332937-155
209-278
MLKi8_033391-180
MLKi8_0344250-214
Geodermatophilus sp., RDM14 PaGL#36_00297125-321
PaGL#36_0041620-209
PaGL#36_0128546-214
PaGL#36_0319473-179
PaGL#36_0417127-228
Methylorubrum populi, CTY4 PaGL#39_00504109-311
PaGL#39_0088935-170
PaGL#39_0161749-266
PaGL#39_0173234-224
PaGL#39_0407552-236
PaGL#39_0435148-247
Fictibacillus phosphorivorans, TY7 PaGL#38_0112929-211
PaGL#38_01762115-312
PaGL#38_0355621-193
PaGL#38_0374125-149
PaGL#38_0424762-225
PaGL#38_0476623-217
Methanospirillum hungatei, GP1 MhGP1_001152-180
MhGP1_00126209-280
MhGP1_0071347-220
MhGP1_0132523-213
MhGP1_0009333-213
Methanospirillum stamsii, Pt1 MLKi8_0037832-212
MLKi8_004022-180
MLKi8_00413207-278
MLKi8_0096547-220
MLKi8_0160824-220
Syntrophomonas wolfei, saponavida Swsap_0052630-213
Swsap_010532-161
Swsap_0106423-212
Swsap_0143131-223
Bacillus subtilis, 30VD-1 PaGL#66_013961-193
PaGL#66_0190934-150
200-270
PaGL#66_0314430-211
PaGL#66_0367119-216
Peribacillus frigoritolerans, 30N-5 PaGL#67_0122319-217
PaGL#67_014231-162
PaGL#67_0184318-193
PaGL#67_0257768-276
PaGL#67_03208113-310
PaGL#67_0448329-211
Micromonospora inositola, Utrum1 PaGL#61_0023356-234
PaGL#61_010041-171
PaGL#61_01118192-265
PaGL#61_0140856-278
PaGL#61_0145329-214
PaGL#61_017022-78
PaGL#61_0178168-176
PaGL#61_02265131-328
PaGL#61_0391623-222
PaGL#61_0672250-213
Sphingomonas sp., CR2A3 PaGL#62_0092745-228
PaGL#62_03076129-351
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0223141-192
AnGL54_028451-123
AnGL54_0324130-194
AnGL54_0394022-206
Niallia taxi, AG-1 PaGL#37_0555747-240
PaGL#37_002371-193
PaGL#37_0493075-264
PaGL#37_0259337-273
Methanospirillum.hungatei GP1, MhGP1 8064048239:MhGP1_0157823-213
8064048863:MhGP1_0218947-220
8064049461:MhGP1_02775209-280
8064049472:MhGP1_027862-180
8064049495:MhGP1_0280933-213
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11443:Mhun_0044124-214
Ga0065338_112518:Mhun_0251651-213
Ga0065338_112673:Mhun_026691-180
Mhun_02680207-278
Ga0065338_113330:Mhun_0332745-220
MPOB, Sfum 639701195:Sfum_0045119-260
639701270:Sfum_00529160-349
639702004:Sfum_0128124-205
639702425:Sfum_0170633-219
639702466:Sfum_017458-179
639704693:Sfum_0401337-217
639704859:Sfum_0418543-204
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10490:Spalm_0078621-202
Spalm_007911-161
Ga0128340_101219:Spalm_0021542-247
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11361:Swol_0034842-241
Ga0065332_112584:Swol_025381-161
Ga0065332_112609:Swol_0256322-214
Syntrophomonas zehnderi, OL-4 Szehn Szehn_0260467-201
Ga0124040_10487:Szehn_0019721-203
Szehn_002162-161
Syntrophus aciditrophicus, SB 637858364:SYN_0005939-239
637859169:SYN_00802144-333
637859457:SYN_0106431-213
637860887:SYN_0239748-176
637861039:SYN_02541236-312
Syntrophus gentianae, DSM8423 Sgen_03230141-330
Ga0074853_13127:Sgen_0289638-239
Ga0074853_10336:Sgen_0046147-100
Ga0074853_11577:Sgen_0208431-213
Sgen_00169218-312
Mucilaginibacter gossypii, cycad 4 PaGL#42_0025827-161
PaGL#42_0032846-224
PaGL#42_012699-200
PaGL#42_0127632-271
PaGL#42_021282-180
PaGL#42_030291-190
PaGL#42_0375782-279
PaGL#42_045526-211
PaGL#42_0462019-190
PaGL#42_048612-163
PaGL#42_0497620-191
Ruminococcus callidus, ATCC 27760 Rcal_0270925-218

PF07521:RMMBL. Zn-dependent metallo-hydrolase RNA specificity domain

Found 116 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516971.1:LOMAGDGF_00991353-415
WP_003516520.1:LOMAGDGF_01666396-460
Clostridium acetobutylicum, DSM 1731 WP_010964990.1:FHOCHPCF_01727353-416
Acetivibrio alkalicellulosi, DSM 17461 2510059991:NJMEOJLD_00253353-407
2510063702:NJMEOJLD_03880353-415
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939339.1:NEIHKHHH_00053353-414
WP_036941123.1:NEIHKHHH_00793353-408
WP_036943740.1:NEIHKHHH_01456396-460
WP_036941424.1:NEIHKHHH_01663381-442
WP_036939958.1:NEIHKHHH_05708353-408
Ruminococcus albus_7, DSM 20455 WP_013497209.1:HCIAFFOI_00486392-454
WP_013498308.1:HCIAFFOI_01703414-463
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11329:GJLLLGJL_00317391-455
Ga0065332_111267:GJLLLGJL_01241392-456
Ga0065332_111341:GJLLLGJL_01310361-406
Paenibacillus guangzhouensis, KCTC 33171 WP_152392524.1:KDFAKKPF_01037366-412
WP_152393269.1:KDFAKKPF_01888362-413
Clostridium acetobutylicum, ATCC 824 WP_010964990.1:OJAMHIDJ_01734353-416
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696203.1:PROKKA_01828354-415
WP_137696007.1:PROKKA_02040398-462
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00602352-406
OINOEOOJ_00703392-456
FD_25_22, AnGL7 AnGL7_01186395-445
AnGL7_01229394-456
FD_25_27, AnGL8 AnGL8_02745398-452
FD_MS_7_1, AnGL28 AnGL28_03243394-459
FD_SO4_37_1, AnGL2 AnGL2_02373394-459
FD_YE_25_21, AnGL21 AnGL21_00175381-442
FD_YE_37_9_2, AnGL4 AnGL4_00117359-406
Syntrophus buswellii, Sbus Sbus_00081392-456
Sbus_01032389-448
Syntrophomonas curvata, Scurva Scurva_01441391-455
Scurva_01695361-407
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00311392-456
Sespor_00402352-406
Syntrophomonas wolfei methylbutyratica, Swm Swm_01482361-406
Swm_02765391-455
Terrisporobacter hibernicus, AnGL54 AnGL54_00046556-609
AnGL54_01238355-415
AnGL54_02013357-418
AnGL54_02706351-413
FD-25-21, AnGL21 AnGL21_00940401-453
AnGL21_01335394-456
AnGL21_01378396-448
Paraclostridium benzoelyticum, AnGL27 AnGL27_00399355-415
AnGL27_00422309-369
AnGL27_01448361-414
AnGL27_01505355-415
AnGL27_02850357-419
FD-MS-7-8, AnGL9 AnGL9_02785395-459
FD-YE-37-9-3, AnGL29 AnGL29_00842359-406
Methylobacterium radiotolerans, GTSA1 PaGL#34_02263356-409
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00038393-458
PaGL#35_03403395-458
Syntrophomonas erecta, GB-438 Ga0610585_00602352-406
Ga0610585_00703392-456
Variovorax sp., EBFNA2 PaGL#33_06183379-442
PaGL#33_06576379-442
Variovorax paradoxus, 2u118 PaGL#32_06219379-442
Dietzia cinnamea, 55 PaGL#56_01742552-599
Maridesulfovibrio salexigens, AnGL23 AnGL23_00795393-455
AnGL23_01964357-405
Exiguobacterium mexicanum, AnGL24 AnGL24_01136358-408
AnGL24_01320361-414
Clostridium subterminale, CB-LS10-1 AnGL53_01068354-414
AnGL53_01337392-455
AnGL53_01519353-414
AnGL53_02349358-408
Priestia megaterium, 10L1 PaGL#57_01398355-409
PaGL#57_03413361-408
PaGL#57_05882365-409
PaGL#57_06108361-413
Methanospirillum lacunae, Ki8-1 MLKi8_02162557-620
Geodermatophilus sp., RDM14 PaGL#36_03194373-422
Methylorubrum populi, CTY4 PaGL#39_00889356-409
Fictibacillus phosphorivorans, TY7 PaGL#38_02112359-403
PaGL#38_02336360-409
Methanospirillum hungatei, GP1 MhGP1_01318381-418
MhGP1_02683555-616
Methanospirillum stamsii, Pt1 MLKi8_01602381-427
MLKi8_03385556-616
Syntrophomonas wolfei, saponavida Swsap_02615361-406
Swsap_02743394-458
Bacillus subtilis, 30VD-1 PaGL#66_02452361-407
PaGL#66_02680359-411
Peribacillus frigoritolerans, 30N-5 PaGL#67_01576365-409
PaGL#67_03922356-409
PaGL#67_04149360-415
Micromonospora inositola, Utrum1 PaGL#61_01781364-417
Sphingomonas sp., CR2A3 PaGL#62_00829351-394
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_04159556-609
AnGL54_01966355-415
AnGL54_02816357-418
AnGL54_03509351-413
Niallia taxi, AG-1 PaGL#37_01267359-407
PaGL#37_01467356-414
PaGL#37_02882364-410
Methanospirillum.hungatei GP1, MhGP1 8064046847:MhGP1_00220555-616
8064048246:MhGP1_01585381-418
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111746:Mhun_01747555-616
MPOB, Sfum 639702168:Sfum_01445390-454
639702364:Sfum_01646358-412
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11222:Spalm_01805403-467
Spalm_01357361-403
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11329:Swol_00317391-455
Ga0065332_111267:Swol_01241392-456
Ga0065332_111341:Swol_01310361-406
Syntrophomonas zehnderi, OL-4 Szehn Szehn_01757360-407
Ga0124040_127159:Szehn_01618392-456
Syntrophus aciditrophicus, SB 637858372:SYN_00067392-456
Syntrophus gentianae, DSM8423 Ga0074853_11419:Sgen_01942392-456
Ga0074853_11765:Sgen_02234392-448
Mucilaginibacter gossypii, cycad 4 PaGL#42_01269379-443
PaGL#42_04319392-455
Ruminococcus callidus, ATCC 27760 Rcal_01451391-455
Rcal_02731413-464

PF17770:RNase_J_C. Ribonuclease J C-terminal domain

Found 64 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516971.1:LOMAGDGF_00991453-555
Clostridium acetobutylicum, DSM 1731 WP_010964990.1:FHOCHPCF_01727453-555
Acetivibrio alkalicellulosi, DSM 17461 2510059991:NJMEOJLD_00253453-552
2510063702:NJMEOJLD_03880453-555
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939339.1:NEIHKHHH_00053453-555
WP_036941123.1:NEIHKHHH_00793453-552
WP_036945442.1:NEIHKHHH_029490-67
WP_036939958.1:NEIHKHHH_05708453-552
Ruminococcus albus_7, DSM 20455 WP_013498308.1:HCIAFFOI_01703512-614
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111341:GJLLLGJL_01310451-553
Paenibacillus guangzhouensis, KCTC 33171 WP_152392524.1:KDFAKKPF_01037456-558
WP_152393269.1:KDFAKKPF_01888453-555
Clostridium acetobutylicum, ATCC 824 WP_010964990.1:OJAMHIDJ_01734453-555
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696203.1:PROKKA_01828453-555
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00602451-553
FD_YE_37_9_2, AnGL4 AnGL4_00117452-554
Syntrophomonas curvata, Scurva Scurva_01695452-554
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00402451-553
Syntrophomonas wolfei methylbutyratica, Swm Swm_01482451-553
Terrisporobacter hibernicus, AnGL54 AnGL54_01238454-556
AnGL54_02013456-558
AnGL54_02706452-554
Paraclostridium benzoelyticum, AnGL27 AnGL27_00399454-556
AnGL27_00422408-510
AnGL27_01448454-556
AnGL27_01505454-556
AnGL27_02850457-559
FD-YE-37-9-3, AnGL29 AnGL29_00842452-554
Methylobacterium radiotolerans, GTSA1 PaGL#34_02263457-557
Syntrophomonas erecta, GB-438 Ga0610585_00602451-553
Dietzia cinnamea, 55 PaGL#56_01742645-742
Maridesulfovibrio salexigens, AnGL23 AnGL23_01964451-550
Exiguobacterium mexicanum, AnGL24 AnGL24_01136453-555
AnGL24_01320454-555
Clostridium subterminale, CB-LS10-1 AnGL53_01068453-555
AnGL53_01519452-554
AnGL53_02349454-556
Priestia megaterium, 10L1 PaGL#57_01398448-535
PaGL#57_03413453-555
PaGL#57_05882455-557
PaGL#57_06108455-557
Geodermatophilus sp., RDM14 PaGL#36_03194468-566
Methylorubrum populi, CTY4 PaGL#39_00889457-557
Fictibacillus phosphorivorans, TY7 PaGL#38_02112453-556
PaGL#38_02336453-555
Syntrophomonas wolfei, saponavida Swsap_02615452-554
Bacillus subtilis, 30VD-1 PaGL#66_02452453-555
PaGL#66_02680453-555
Peribacillus frigoritolerans, 30N-5 PaGL#67_01576455-557
PaGL#67_03922454-555
PaGL#67_04149453-555
Micromonospora inositola, Utrum1 PaGL#61_01781464-562
Sphingomonas sp., CR2A3 PaGL#62_00829449-544
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01966454-556
AnGL54_02816456-558
AnGL54_03509452-554
Niallia taxi, AG-1 PaGL#37_01267453-555
PaGL#37_01467451-553
PaGL#37_02882454-556
MPOB, Sfum 639702364:Sfum_01646458-561
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_0135639-141
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111341:Swol_01310451-553
Syntrophomonas zehnderi, OL-4 Szehn Szehn_01757451-553
Ruminococcus callidus, ATCC 27760 Rcal_02731513-615
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