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PaGL#39_01756 Locus tags: • Sequence Length: 721

Methylorubrum populi, CTY4 Batch4_genome_fasta/bc2015

5050100100150150200200250250300300350350400400450450500500550550600600650650700700750750
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PaGL#39_01752 PaGL#39_01754 PaGL#39_01755 PaGL#39_01756 PaGL#39_01760 PaGL#39_01761 
    [SP]_[PF13505]_[PF04966]_[TM]

    [SP]_[2:PF13505]_[302:PF04966]_[TM]

    [SP]_[2:IPR027385]_[26:IPR036709]_[302:IPR007049]_[TM]

Looking for similar signatures in the working genomes

PF13505:OMP_b-brl. Outer membrane protein beta-barrel domain

Found 96 similar signatures
FD_25_22, AnGL7 AnGL7_0033420-212
AnGL7_012967-170
AnGL7_01893311-453
AnGL7_0215632-213
FD_25_27, AnGL8 AnGL8_0254146-179
AnGL8_029509-189
FD_MS_7_1, AnGL28 AnGL28_0079110-179
FD_SO4_25_1_F22, AnGL30 AnGL30_00509256-405
AnGL30_008808-196
AnGL30_0171727-212
FD_SO4_37_1, AnGL2 AnGL2_0347010-179
FD_YE_25_21, AnGL21 AnGL21_0431611-167
AnGL21_043385-181
AnGL21_017134-157
FD_YE_37_3, AnGL26 AnGL26_001995-149
AnGL26_009008-242
AnGL26_01491219-456
AnGL26_0158421-195
AnGL26_015877-214
AnGL26_0170823-203
AnGL26_0190719-173
AnGL26_01921118-241
AnGL26_01922107-270
AnGL26_02170221-338
AnGL26_0241222-179
AnGL26_0283126-183
AnGL26_0288959-168
AnGL26_0294117-227
AnGL26_0324529-156
AnGL26_0414718-162
FD_YE_37_8_2, AnGL3 AnGL3_0116222-202
AnGL3_0200216-149
AnGL3_0208720-166
AnGL3_02138180-313
AnGL3_02139302-483
AnGL3_0214024-181
AnGL3_0255718-186
AnGL3_0272823-184
Syntrophus buswellii, Sbus Sbus_0107315-192
FD-25-21, AnGL21 AnGL21_0038811-192
AnGL21_00622352-494
AnGL21_012748-170
AnGL21_0230016-212
Sunxiuqinia elliptica, AnGL22 AnGL22_002005-149
AnGL22_009018-242
AnGL22_01493219-456
AnGL22_0158621-195
AnGL22_015897-214
AnGL22_0170523-203
AnGL22_0190419-173
AnGL22_01918118-241
AnGL22_01919107-270
AnGL22_02167221-338
AnGL22_0240922-179
AnGL22_0282826-183
AnGL22_0288659-168
AnGL22_0293810-207
AnGL22_0324129-156
AnGL22_0414318-162
Methylobacterium radiotolerans, GTSA1 PaGL#34_0003646-238
PaGL#34_0200682-263
PaGL#34_0387224-245
PaGL#34_0413237-234
PaGL#34_0478441-314
PaGL#34_0538632-230
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0043835-178
PaGL#35_0074119-171
PaGL#35_0157064-245
PaGL#35_0210420-221
PaGL#35_0250718-189
PaGL#35_0274628-233
PaGL#35_0354725-176
PaGL#35_0505723-193
PaGL#35_0578421-168
PaGL#35_0623836-197
Variovorax sp., EBFNA2 PaGL#33_0312911-203
Maridesulfovibrio salexigens, AnGL23 AnGL23_01422283-464
Methylorubrum populi, CTY4 PaGL#39_0071948-254
PaGL#39_017562-219
PaGL#39_0259342-237
PaGL#39_038599-256
PaGL#39_047657-299
PaGL#39_0476653-272
PaGL#39_0476745-267
Sphingomonas sp., CR2A3 PaGL#62_025917-201
PaGL#62_0299110-200
PaGL#62_035667-178
MPOB, Sfum 639702607:Sfum_018928-201
Syntrophus aciditrophicus, SB 637860764:SYN_0229413-228
637860769:SYN_0229814-199
Mucilaginibacter gossypii, cycad 4 PaGL#42_0016047-217
PaGL#42_0051027-171
PaGL#42_0218425-171
PaGL#42_0378573-254
PaGL#42_0522219-170
PaGL#42_0553965-213

PF04966:OprB. Carbohydrate-selective porin, OprB family

Found 26 similar signatures
FD_MS_7_1, AnGL28 AnGL28_0308471-268
285-395
FD_SO4_37_1, AnGL2 AnGL2_0221371-268
285-395
Syntrophus buswellii, Sbus Sbus_0278195-409
FD-MS-7-8, AnGL9 AnGL9_0013271-244
286-395
Methylobacterium radiotolerans, GTSA1 PaGL#34_00036341-711
PaGL#34_0104397-481
PaGL#34_01578125-497
PaGL#34_04132324-708
PaGL#34_05386320-703
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0004952-436
Maridesulfovibrio salexigens, AnGL23 AnGL23_03720146-408
Methylorubrum populi, CTY4 PaGL#39_01084115-486
PaGL#39_01185119-476
PaGL#39_01233135-522
PaGL#39_01756302-687
PaGL#39_02483128-508
PaGL#39_03075113-470
PaGL#39_03204107-468
PaGL#39_03510135-497
Sphingomonas sp., CR2A3 PaGL#62_0140951-387
MPOB, Sfum 639703522:Sfum_02825148-446
Syntrophus gentianae, DSM8423 Ga0074853_12931:Sgen_0282894-409
Mucilaginibacter gossypii, cycad 4 PaGL#42_0542251-435
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