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PaGL#39_02429 Locus tags: • Sequence Length: 310

Methylorubrum populi, CTY4 Batch4_genome_fasta/bc2015

5050100100150150200200250250300300350350
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unknown PaGL#39_02427 PaGL#39_02428 PaGL#39_02429 PaGL#39_02430 PaGL#39_02431 PaGL#39_02432 PaGL#39_02434 
    [PF01678]_[PF01678]

    [8:PF01678]_[165:PF01678]

    [8:IPR001653]_[165:IPR001653]

Looking for similar signatures in the working genomes

PF01678:DAP_epimerase. Diaminopimelate epimerase

Found 118 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003511603.1:LOMAGDGF_006802-124
154-270
Clostridium acetobutylicum, DSM 1731 WP_010965912.1:FHOCHPCF_0265216-124
170-281
Acetivibrio alkalicellulosi, DSM 17461 2510062402:NJMEOJLD_026022-124
154-270
Pseudobacteroides cellulosolvens, DSM 2933 WP_036941665.1:NEIHKHHH_023952-124
154-270
Ruminococcus albus_7, DSM 20455 WP_013498995.1:HCIAFFOI_024481073-1194
1228-1343
Paenibacillus guangzhouensis, KCTC 33171 WP_152392309.1:KDFAKKPF_007842-126
157-273
Clostridium acetobutylicum, ATCC 824 WP_010965912.1:OJAMHIDJ_0266116-124
170-281
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698139.1:PROKKA_009222-124
154-270
FD_25_22, AnGL7 AnGL7_000564-125
153-268
FD_25_27, AnGL8 AnGL8_030674-125
153-269
FD_MS_7_1, AnGL28 AnGL28_012254-119
137-233
FD_SO4_25_1_F22, AnGL30 AnGL30_007636-133
162-275
FD_SO4_37_1, AnGL2 AnGL2_003554-119
137-233
FD_YE_25_21, AnGL21 AnGL21_030524-123
153-268
FD_YE_37_3, AnGL26 AnGL26_012554-127
157-270
FD_YE_37_8_2, AnGL3 AnGL3_0031730-122
158-265
FD_YE_37_9_2, AnGL4 AnGL4_027792-124
154-270
Syntrophus buswellii, Sbus Sbus_000772-111
140-258
Sbus_021173-122
152-266
Syntrophomonas curvata, Scurva Scurva_0083731-151
181-295
Terrisporobacter hibernicus, AnGL54 AnGL54_021582-125
158-269
FD-25-21, AnGL21 AnGL21_025644-124
153-268
Sunxiuqinia elliptica, AnGL22 AnGL22_012574-127
157-270
Paraclostridium benzoelyticum, AnGL27 AnGL27_032522-127
157-268
FD-MS-7-8, AnGL9 AnGL9_016044-112
137-237
FD-YE-37-9-3, AnGL29 AnGL29_000372-124
154-270
Methylobacterium radiotolerans, GTSA1 PaGL#34_0578138-162
195-310
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_005154-119
132-250
Variovorax sp., EBFNA2 PaGL#33_008204-125
165-279
Variovorax paradoxus, 2u118 PaGL#32_008394-127
168-282
Dietzia cinnamea, 55 PaGL#56_0172415-154
170-283
Maridesulfovibrio salexigens, AnGL23 AnGL23_0338210-132
152-264
Clostridium subterminale, CB-LS10-1 AnGL53_014365-126
159-266
Priestia megaterium, 10L1 PaGL#57_0258428-151
183-299
Variovorax paradoxus, SPNA7 PaGL#43_008304-127
168-282
Methanospirillum lacunae, Ki8-1 MLKi8_007154-126
152-263
Geodermatophilus sp., RDM14 PaGL#36_031578-146
163-282
Methylorubrum populi, CTY4 PaGL#39_024298-131
165-278
Fictibacillus phosphorivorans, TY7 PaGL#38_038605-130
162-278
Methanospirillum hungatei, GP1 MhGP1_007844-126
150-264
Methanospirillum stamsii, Pt1 MLKi8_010064-124
151-264
Syntrophomonas wolfei, saponavida Swsap_009132-121
150-265
Bacillus subtilis, 30VD-1 PaGL#66_010955-130
160-276
Peribacillus frigoritolerans, 30N-5 PaGL#67_027005-111
162-269
Micromonospora inositola, Utrum1 PaGL#61_018372-130
148-273
Sphingomonas sp., CR2A3 PaGL#62_025837-105
165-260
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_029612-125
158-269
Niallia taxi, AG-1 PaGL#37_023705-109
162-279
Methanospirillum.hungatei GP1, MhGP1 8064048792:MhGP1_021184-126
150-264
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113309:Mhun_033064-126
150-263
MPOB, Sfum 639700809:Sfum_000629-127
147-249
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_02099177-300
329-445
Ga0128340_10839:Spalm_013230-111
Ga0128340_10840:Spalm_013242-125
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12963:Szehn_017802-125
154-268
Syntrophus aciditrophicus, SB 637858369:SYN_000643-116
142-260
637860470:SYN_0202620-139
168-282
Syntrophus gentianae, DSM8423 Ga0074853_11415:Sgen_019382-111
141-242
Mucilaginibacter gossypii, cycad 4 PaGL#42_0458917-134
145-266
Ruminococcus callidus, ATCC 27760 Rcal_011433-127
156-272

PF01678:DAP_epimerase. Diaminopimelate epimerase

Found 118 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003511603.1:LOMAGDGF_006802-124
154-270
Clostridium acetobutylicum, DSM 1731 WP_010965912.1:FHOCHPCF_0265216-124
170-281
Acetivibrio alkalicellulosi, DSM 17461 2510062402:NJMEOJLD_026022-124
154-270
Pseudobacteroides cellulosolvens, DSM 2933 WP_036941665.1:NEIHKHHH_023952-124
154-270
Ruminococcus albus_7, DSM 20455 WP_013498995.1:HCIAFFOI_024481073-1194
1228-1343
Paenibacillus guangzhouensis, KCTC 33171 WP_152392309.1:KDFAKKPF_007842-126
157-273
Clostridium acetobutylicum, ATCC 824 WP_010965912.1:OJAMHIDJ_0266116-124
170-281
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698139.1:PROKKA_009222-124
154-270
FD_25_22, AnGL7 AnGL7_000564-125
153-268
FD_25_27, AnGL8 AnGL8_030674-125
153-269
FD_MS_7_1, AnGL28 AnGL28_012254-119
137-233
FD_SO4_25_1_F22, AnGL30 AnGL30_007636-133
162-275
FD_SO4_37_1, AnGL2 AnGL2_003554-119
137-233
FD_YE_25_21, AnGL21 AnGL21_030524-123
153-268
FD_YE_37_3, AnGL26 AnGL26_012554-127
157-270
FD_YE_37_8_2, AnGL3 AnGL3_0031730-122
158-265
FD_YE_37_9_2, AnGL4 AnGL4_027792-124
154-270
Syntrophus buswellii, Sbus Sbus_000772-111
140-258
Sbus_021173-122
152-266
Syntrophomonas curvata, Scurva Scurva_0083731-151
181-295
Terrisporobacter hibernicus, AnGL54 AnGL54_021582-125
158-269
FD-25-21, AnGL21 AnGL21_025644-124
153-268
Sunxiuqinia elliptica, AnGL22 AnGL22_012574-127
157-270
Paraclostridium benzoelyticum, AnGL27 AnGL27_032522-127
157-268
FD-MS-7-8, AnGL9 AnGL9_016044-112
137-237
FD-YE-37-9-3, AnGL29 AnGL29_000372-124
154-270
Methylobacterium radiotolerans, GTSA1 PaGL#34_0578138-162
195-310
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_005154-119
132-250
Variovorax sp., EBFNA2 PaGL#33_008204-125
165-279
Variovorax paradoxus, 2u118 PaGL#32_008394-127
168-282
Dietzia cinnamea, 55 PaGL#56_0172415-154
170-283
Maridesulfovibrio salexigens, AnGL23 AnGL23_0338210-132
152-264
Clostridium subterminale, CB-LS10-1 AnGL53_014365-126
159-266
Priestia megaterium, 10L1 PaGL#57_0258428-151
183-299
Variovorax paradoxus, SPNA7 PaGL#43_008304-127
168-282
Methanospirillum lacunae, Ki8-1 MLKi8_007154-126
152-263
Geodermatophilus sp., RDM14 PaGL#36_031578-146
163-282
Methylorubrum populi, CTY4 PaGL#39_024298-131
165-278
Fictibacillus phosphorivorans, TY7 PaGL#38_038605-130
162-278
Methanospirillum hungatei, GP1 MhGP1_007844-126
150-264
Methanospirillum stamsii, Pt1 MLKi8_010064-124
151-264
Syntrophomonas wolfei, saponavida Swsap_009132-121
150-265
Bacillus subtilis, 30VD-1 PaGL#66_010955-130
160-276
Peribacillus frigoritolerans, 30N-5 PaGL#67_027005-111
162-269
Micromonospora inositola, Utrum1 PaGL#61_018372-130
148-273
Sphingomonas sp., CR2A3 PaGL#62_025837-105
165-260
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_029612-125
158-269
Niallia taxi, AG-1 PaGL#37_023705-109
162-279
Methanospirillum.hungatei GP1, MhGP1 8064048792:MhGP1_021184-126
150-264
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113309:Mhun_033064-126
150-263
MPOB, Sfum 639700809:Sfum_000629-127
147-249
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_02099177-300
329-445
Ga0128340_10839:Spalm_013230-111
Ga0128340_10840:Spalm_013242-125
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12963:Szehn_017802-125
154-268
Syntrophus aciditrophicus, SB 637858369:SYN_000643-116
142-260
637860470:SYN_0202620-139
168-282
Syntrophus gentianae, DSM8423 Ga0074853_11415:Sgen_019382-111
141-242
Mucilaginibacter gossypii, cycad 4 PaGL#42_0458917-134
145-266
Ruminococcus callidus, ATCC 27760 Rcal_011433-127
156-272
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