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MLKi8_00890 Locus tags: • Sequence Length: 502

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200250250300300350350400400450450500500550550
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MLKi8_00885 MLKi8_00886 MLKi8_00887 MLKi8_00888 MLKi8_00889 MLKi8_00890 MLKi8_00893 MLKi8_00894 
    [PF01058]_[PF10559]_[PF00344]_[TM]

    [21:PF01058]_[38:PF10559]_[72:PF00344]_[TM]

    [6:IPR023201]_[21:IPR006137]_[38:IPR019561]_[72:IPR002208]_[TM]

Looking for similar signatures in the working genomes

PF01058:Oxidored_q6. NADH ubiquinone oxidoreductase, 20 Kd subunit

Found 89 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514859.1:LOMAGDGF_0059317-128
Clostridium acetobutylicum, DSM 1731 WP_010890825.1:FHOCHPCF_0394145-193
Acetivibrio alkalicellulosi, DSM 17461 2510059988:NJMEOJLD_0025046-193
Pseudobacteroides cellulosolvens, DSM 2933 WP_036937422.1:NEIHKHHH_0429146-193
WP_036935080.1:NEIHKHHH_0501721-132
WP_036943337.1:NEIHKHHH_05117146-257
Paenibacillus guangzhouensis, KCTC 33171 WP_152396327.1:KDFAKKPF_0549545-155
Clostridium acetobutylicum, ATCC 824 WP_010890825.1:OJAMHIDJ_0395445-193
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696070.1:PROKKA_01973150-261
WP_137698904.1:PROKKA_0362621-132
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0035645-157
FD_25_22, AnGL7 AnGL7_01260270-419
FD_YE_25_21, AnGL21 AnGL21_0359813-155
AnGL21_0020258-205
Syntrophus buswellii, Sbus Sbus_0229213-164
Syntrophomonas curvata, Scurva Scurva_0153238-150
Scurva_0184749-201
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0064945-157
Syntrophomonas wolfei methylbutyratica, Swm Swm_0122749-202
Terrisporobacter hibernicus, AnGL54 AnGL54_0127141-188
FD-25-21, AnGL21 AnGL21_01304270-419
Methylobacterium radiotolerans, GTSA1 PaGL#34_0227873-181
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0282538-147
PaGL#35_0638943-151
Syntrophomonas erecta, GB-438 Ga0610585_0035645-157
Variovorax sp., EBFNA2 PaGL#33_0411136-145
Variovorax paradoxus, 2u118 PaGL#32_0564917-183
PaGL#32_0566958-204
PaGL#32_0361236-145
Dietzia cinnamea, 55 PaGL#56_0039136-145
Maridesulfovibrio salexigens, AnGL23 AnGL23_0125647-202
AnGL23_0139166-211
AnGL23_0174644-156
AnGL23_0388223-134
Clostridium subterminale, CB-LS10-1 AnGL53_0223940-187
Variovorax paradoxus, SPNA7 PaGL#43_0563917-183
PaGL#43_0565958-204
PaGL#43_0365136-145
Methanospirillum lacunae, Ki8-1 MLKi8_0004191-198
MLKi8_0049942-168
MLKi8_0089021-134
MLKi8_0342417-128
Geodermatophilus sp., RDM14 PaGL#36_0383836-146
Methylorubrum populi, CTY4 PaGL#39_0090373-181
Fictibacillus phosphorivorans, TY7 PaGL#38_0456544-154
Methanospirillum hungatei, GP1 MhGP1_0016017-128
MhGP1_0023154-162
MhGP1_0054325-137
MhGP1_0072014-141
MhGP1_0154420-131
Methanospirillum stamsii, Pt1 MLKi8_0046717-128
MLKi8_0053254-161
MLKi8_0077625-137
MLKi8_0097214-141
MLKi8_0189220-131
Syntrophomonas wolfei, saponavida Swsap_0179346-158
Swsap_0269549-202
Peribacillus frigoritolerans, 30N-5 PaGL#67_0046345-155
Micromonospora inositola, Utrum1 PaGL#61_0057436-146
PaGL#61_0378830-200
PaGL#61_0646133-141
Sphingomonas sp., CR2A3 PaGL#62_0081158-168
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0199941-188
Methanospirillum.hungatei GP1, MhGP1 8064048016:MhGP1_0135820-131
MhGP1_0218214-141
8064049037:MhGP1_0235925-137
8064049358:MhGP1_0267154-162
8064049428:MhGP1_0274217-128
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11126:Mhun_0012720-131
Ga0065338_112712:Mhun_0270817-128
Ga0065338_112788:Mhun_0278454-162
Ga0065338_113084:Mhun_0308325-137
Mhun_0332014-141
MPOB, Sfum 639700954:Sfum_0021340-152
639702561:Sfum_0184112-170
639702710:Sfum_0199863-145
639702988:Sfum_0228613-169
639703486:Sfum_0279118-168
639703725:Sfum_0303361-206
639704307:Sfum_0361912-168
639704728:Sfum_0404712-172
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_11351:Szehn_0089849-202
Ga0124040_11369:Szehn_0091642-154
Syntrophus aciditrophicus, SB 637858426:SYN_0011312-148
Syntrophus gentianae, DSM8423 Ga0074853_12415:Sgen_0259465-150
Ga0074853_11650:Sgen_0213693-240
Ga0074853_10642:Sgen_0103613-164
Mucilaginibacter gossypii, cycad 4 PaGL#42_0245838-147
PaGL#42_0346843-152

PF10559:Plug_translocon. Plug domain of Sec61p

Found 5 similar signatures
Methanospirillum lacunae, Ki8-1 MLKi8_0042138-72
Methanospirillum hungatei, GP1 MhGP1_0064138-72
Methanospirillum stamsii, Pt1 MLKi8_0089038-72
Methanospirillum.hungatei GP1, MhGP1 8064048938:MhGP1_0226138-72
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113218:Mhun_0321538-72

PF00344:SecY. SecY

Found 62 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514662.1:LOMAGDGF_0048170-410
Clostridium acetobutylicum, DSM 1731 WP_010966392.1:FHOCHPCF_0315869-407
Acetivibrio alkalicellulosi, DSM 17461 2510061258:NJMEOJLD_0148771-411
Pseudobacteroides cellulosolvens, DSM 2933 WP_242853194.1:NEIHKHHH_0254971-412
Ruminococcus albus_7, DSM 20455 WP_013496815.1:HCIAFFOI_0005772-418
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112473:GJLLLGJL_0242867-404
Paenibacillus guangzhouensis, KCTC 33171 WP_152395406.1:KDFAKKPF_0439269-415
Clostridium acetobutylicum, ATCC 824 WP_010966392.1:OJAMHIDJ_0316769-407
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697980.1:PROKKA_0073672-413
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0240767-404
FD_25_22, AnGL7 AnGL7_0352376-416
FD_25_27, AnGL8 AnGL8_0130275-413
FD_SO4_25_1_F22, AnGL30 AnGL30_0093073-418
FD_YE_25_21, AnGL21 AnGL21_0285075-418
FD_YE_37_3, AnGL26 AnGL26_0111173-415
FD_YE_37_8_2, AnGL3 AnGL3_0140772-412
FD_YE_37_9_2, AnGL4 AnGL4_0238570-408
Syntrophus buswellii, Sbus Sbus_0049170-409
Syntrophomonas curvata, Scurva Scurva_0278767-404
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0111067-404
Syntrophomonas wolfei methylbutyratica, Swm Swm_0281167-404
Terrisporobacter hibernicus, AnGL54 AnGL54_0330273-409
FD-25-21, AnGL21 AnGL21_0274976-416
Sunxiuqinia elliptica, AnGL22 AnGL22_0111373-415
Paraclostridium benzoelyticum, AnGL27 AnGL27_0076968-404
FD-MS-7-8, AnGL9 AnGL9_0303774-422
FD-YE-37-9-3, AnGL29 AnGL29_0311070-408
Methylobacterium radiotolerans, GTSA1 PaGL#34_0245280-417
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0587870-408
Syntrophomonas erecta, GB-438 Ga0610585_0240767-404
Variovorax sp., EBFNA2 PaGL#33_0578173-413
Variovorax paradoxus, 2u118 PaGL#32_0503973-413
Dietzia cinnamea, 55 PaGL#56_0232574-423
Maridesulfovibrio salexigens, AnGL23 AnGL23_0202271-411
Exiguobacterium mexicanum, AnGL24 AnGL24_0295366-412
Clostridium subterminale, CB-LS10-1 AnGL53_0333170-410
Priestia megaterium, 10L1 PaGL#57_0040768-412
PaGL#57_0210767-413
Variovorax paradoxus, SPNA7 PaGL#43_0523573-413
Methanospirillum lacunae, Ki8-1 MLKi8_0042172-457
Geodermatophilus sp., RDM14 PaGL#36_0376874-421
Methylorubrum populi, CTY4 PaGL#39_0192680-417
Fictibacillus phosphorivorans, TY7 PaGL#38_0054169-416
Methanospirillum hungatei, GP1 MhGP1_0064172-457
Methanospirillum stamsii, Pt1 MLKi8_0089072-457
Syntrophomonas wolfei, saponavida Swsap_0094467-404
Bacillus subtilis, 30VD-1 PaGL#66_0003267-413
Peribacillus frigoritolerans, 30N-5 PaGL#67_0011667-414
Micromonospora inositola, Utrum1 PaGL#61_0639572-424
Sphingomonas sp., CR2A3 PaGL#62_0350679-427
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0013873-409
Niallia taxi, AG-1 PaGL#37_0015967-414
Methanospirillum.hungatei GP1, MhGP1 8064048938:MhGP1_0226172-457
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113218:Mhun_0321572-457
MPOB, Sfum 639702342:Sfum_0162470-410
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_12623:Spalm_0271367-339
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112473:Swol_0242867-404
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_118110:Szehn_0030467-404
Syntrophus aciditrophicus, SB 637858630:SYN_0029970-409
Syntrophus gentianae, DSM8423 Sgen_0026970-409
Mucilaginibacter gossypii, cycad 4 PaGL#42_0588770-409
Ruminococcus callidus, ATCC 27760 Rcal_0014172-424
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