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MLKi8_00923 Locus tags: • Sequence Length: 541

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200250250300300350350400400450450500500550550
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MLKi8_00917 MLKi8_00918 MLKi8_00919 MLKi8_00922 MLKi8_00923 MLKi8_00924 MLKi8_00927 MLKi8_00928 
    [PF00076]_[PF02885]_[PF00591]_[PF07831]

    [5:PF00076]_[89:PF02885]_[159:PF00591]_[424:PF07831]

    [2:IPR035979]_[3:IPR000504]_[4:IPR000504]_[5:IPR000504]_[87:IPR036320]_[89:IPR017459]_[154:IPR035902]_[159:IPR000312]_[411:IPR036566]_[424:IPR013102]_[424:IPR013102]

Looking for similar signatures in the working genomes

PF00076:RRM_1. RNA recognition motif

Found 60 similar signatures
FD_25_22, AnGL7 AnGL7_0067869-139
AnGL7_028502-72
FD_25_27, AnGL8 AnGL8_0310978-148
FD_MS_7_1, AnGL28 AnGL28_005294-75
FD_SO4_25_1_F22, AnGL30 AnGL30_000202-72
FD_SO4_37_1, AnGL2 AnGL2_032084-75
FD_YE_25_21, AnGL21 AnGL21_0301063-133
AnGL21_033802-73
FD_YE_37_3, AnGL26 AnGL26_0152213-83
AnGL26_041932-73
FD_YE_37_8_2, AnGL3 AnGL3_007442-72
FD-25-21, AnGL21 AnGL21_0192169-139
AnGL21_033732-72
Sunxiuqinia elliptica, AnGL22 AnGL22_0152413-83
AnGL22_041892-73
FD-MS-7-8, AnGL9 AnGL9_002904-75
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_003092-72
PaGL#35_027302-72
PaGL#35_032793-73
PaGL#35_053103-73
Variovorax sp., EBFNA2 PaGL#33_060784-74
PaGL#33_003624-74
PaGL#33_060544-74
Variovorax paradoxus, 2u118 PaGL#32_003614-74
PaGL#32_052734-74
Maridesulfovibrio salexigens, AnGL23 AnGL23_001454-74
AnGL23_008134-74
AnGL23_016714-74
Variovorax paradoxus, SPNA7 PaGL#43_003364-74
PaGL#43_054894-74
Methanospirillum lacunae, Ki8-1 MLKi8_009225-70
MLKi8_009235-70
MLKi8_010025-70
MLKi8_034375-69
MLKi8_0344933-97
Methanospirillum hungatei, GP1 MhGP1_000805-70
MhGP1_000865-69
MhGP1_009015-70
MhGP1_020515-70
MhGP1_025965-69
Methanospirillum stamsii, Pt1 MLKi8_0001746-111
MLKi8_003625-70
MLKi8_003695-69
MLKi8_0115413-78
MLKi8_023315-69
Methanospirillum.hungatei GP1, MhGP1 8064046934:MhGP1_003075-69
8064047497:MhGP1_008525-70
8064048674:MhGP1_020015-70
8064049502:MhGP1_028165-69
8064049508:MhGP1_028225-70
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111209:Mhun_012095-70
Ga0065338_112527:Mhun_025255-69
Ga0065338_112534:Mhun_025325-70
Ga0065338_113456:Mhun_034525-70
MPOB, Sfum 639700837:Sfum_000904-74
639702218:Sfum_0149812-81
Mucilaginibacter gossypii, cycad 4 PaGL#42_014313-73
PaGL#42_026003-73
PaGL#42_030012-72
PaGL#42_051302-72

PF02885:Glycos_trans_3N. Glycosyl transferase family, helical bundle domain

Found 120 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517204.1:LOMAGDGF_013932-65
WP_003516668.1:LOMAGDGF_015923-66
Clostridium acetobutylicum, DSM 1731 WP_010964854.1:FHOCHPCF_015943-66
WP_010966438.1:FHOCHPCF_032062-65
Acetivibrio alkalicellulosi, DSM 17461 2510060468:NJMEOJLD_007163-66
2510061647:NJMEOJLD_018642-65
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946182.1:NEIHKHHH_003023-66
WP_036946606.1:NEIHKHHH_005433-65
Ruminococcus albus_7, DSM 20455 WP_013498380.1:HCIAFFOI_01776209-271
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11384:GJLLLGJL_003704-63
Ga0065332_11634:GJLLLGJL_006215-66
Paenibacillus guangzhouensis, KCTC 33171 WP_152393948.1:KDFAKKPF_026659-70
WP_152394023.1:KDFAKKPF_027493-66
Clostridium acetobutylicum, ATCC 824 WP_010964854.1:OJAMHIDJ_015993-66
WP_010966438.1:OJAMHIDJ_032152-65
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697741.1:PROKKA_004753-65
WP_137696015.1:PROKKA_020323-66
WP_137696976.1:PROKKA_030172-65
Syntrophomonas erecta, DSM 16215 OINOEOOJ_012763-66
FD_25_22, AnGL7 AnGL7_016653-67
AnGL7_027416-68
AnGL7_029746-68
FD_25_27, AnGL8 AnGL8_005585-67
AnGL8_006895-67
AnGL8_019562-63
FD_MS_7_1, AnGL28 AnGL28_027902-63
FD_SO4_25_1_F22, AnGL30 AnGL30_021811-62
FD_SO4_37_1, AnGL2 AnGL2_019192-63
FD_YE_25_21, AnGL21 AnGL21_018162-63
AnGL21_025185-67
FD_YE_37_3, AnGL26 AnGL26_024305-62
FD_YE_37_8_2, AnGL3 AnGL3_014863-63
FD_YE_37_9_2, AnGL4 AnGL4_000613-66
AnGL4_017591-64
Syntrophus buswellii, Sbus Sbus_011824-65
Sbus_02325112-173
Syntrophomonas curvata, Scurva Scurva_008234-63
Scurva_010653-66
Syntrophomonas erecta sporosyntropha, Sespor Sespor_023643-66
Syntrophomonas wolfei methylbutyratica, Swm Swm_004194-63
Swm_006705-66
Terrisporobacter hibernicus, AnGL54 AnGL54_043483-66
AnGL54_020963-66
FD-25-21, AnGL21 AnGL21_009173-67
AnGL21_032526-68
AnGL21_034797-68
Sunxiuqinia elliptica, AnGL22 AnGL22_024275-62
Paraclostridium benzoelyticum, AnGL27 AnGL27_023533-66
AnGL27_031833-66
FD-MS-7-8, AnGL9 AnGL9_011392-64
AnGL9_024245-66
FD-YE-37-9-3, AnGL29 AnGL29_007863-66
AnGL29_024841-64
Methylobacterium radiotolerans, GTSA1 PaGL#34_034217-66
PaGL#34_0425410-72
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_023911-62
Syntrophomonas erecta, GB-438 Ga0610585_012763-66
Variovorax sp., EBFNA2 PaGL#33_0654199-158
PaGL#33_006085-65
PaGL#33_041374-65
Variovorax paradoxus, 2u118 PaGL#32_006155-65
PaGL#32_0619676-135
PaGL#32_036354-65
Dietzia cinnamea, 55 PaGL#56_0091514-76
PaGL#56_0122422-75
Maridesulfovibrio salexigens, AnGL23 AnGL23_001618-66
Exiguobacterium mexicanum, AnGL24 AnGL24_017663-66
AnGL24_027738-57
Clostridium subterminale, CB-LS10-1 AnGL53_014773-66
Priestia megaterium, 10L1 PaGL#57_032272-62
PaGL#57_044875-67
PaGL#57_046663-66
Variovorax paradoxus, SPNA7 PaGL#43_005905-65
PaGL#43_0613699-158
PaGL#43_036744-65
Methanospirillum lacunae, Ki8-1 MLKi8_0045589-151
MLKi8_034593-63
Geodermatophilus sp., RDM14 PaGL#36_0185711-72
PaGL#36_0367312-74
Methylorubrum populi, CTY4 PaGL#39_026695-67
PaGL#39_045987-66
Fictibacillus phosphorivorans, TY7 PaGL#38_028036-63
PaGL#38_028763-66
Methanospirillum hungatei, GP1 MhGP1_001983-64
MhGP1_0067489-151
Methanospirillum stamsii, Pt1 MLKi8_005025-63
MLKi8_0092389-151
Syntrophomonas wolfei, saponavida Swsap_003821-59
Swsap_015144-65
Swsap_0253111-70
Swsap_028573-65
Bacillus subtilis, 30VD-1 PaGL#66_003583-66
PaGL#66_020314-64
Peribacillus frigoritolerans, 30N-5 PaGL#67_023283-66
PaGL#67_041291-63
Micromonospora inositola, Utrum1 PaGL#61_009706-69
PaGL#61_054198-69
Sphingomonas sp., CR2A3 PaGL#62_0033812-62
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_011773-66
AnGL54_028993-66
Niallia taxi, AG-1 PaGL#37_022171-62
PaGL#37_025775-68
Methanospirillum.hungatei GP1, MhGP1 8064048905:MhGP1_0222889-151
8064049390:MhGP1_027043-64
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112759:Mhun_027553-65
Ga0065338_113251:Mhun_0324889-151
MPOB, Sfum 639701531:Sfum_0079916-69
639702543:Sfum_018244-65
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_1108:Spalm_015704-63
Ga0128340_102172:Spalm_004533-66
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11384:Swol_003704-63
Ga0065332_11634:Swol_006215-66
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14013:Szehn_023104-63
Ga0124040_12674:Szehn_013093-66
Syntrophus aciditrophicus, SB 637858745:SYN_00403111-173
637860165:SYN_017393-65
Syntrophus gentianae, DSM8423 Ga0074853_104102:Sgen_0073813-71
Ga0074853_105135:Sgen_009554-65
Mucilaginibacter gossypii, cycad 4 PaGL#42_006262-39
Ruminococcus callidus, ATCC 27760 Rcal_01007208-271

PF00591:Glycos_transf_3. Glycosyl transferase family, a/b domain

Found 119 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517204.1:LOMAGDGF_0139374-324
WP_003516668.1:LOMAGDGF_0159277-305
Clostridium acetobutylicum, DSM 1731 WP_010964854.1:FHOCHPCF_0159477-306
WP_010966438.1:FHOCHPCF_0320674-323
Acetivibrio alkalicellulosi, DSM 17461 2510060468:NJMEOJLD_0071676-305
2510061647:NJMEOJLD_0186474-323
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946182.1:NEIHKHHH_0030277-305
WP_036946606.1:NEIHKHHH_0054374-323
Ruminococcus albus_7, DSM 20455 WP_013498380.1:HCIAFFOI_01776279-531
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11384:GJLLLGJL_0037072-322
Ga0065332_11634:GJLLLGJL_0062176-303
Paenibacillus guangzhouensis, KCTC 33171 WP_152393948.1:KDFAKKPF_0266578-330
WP_152394023.1:KDFAKKPF_0274977-306
Clostridium acetobutylicum, ATCC 824 WP_010964854.1:OJAMHIDJ_0159977-306
WP_010966438.1:OJAMHIDJ_0321574-323
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697741.1:PROKKA_0047571-323
WP_137696015.1:PROKKA_0203277-304
WP_137696976.1:PROKKA_0301775-326
WP_137699154.1:PROKKA_03268113-182
242-378
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0127677-304
FD_25_22, AnGL7 AnGL7_0166597-317
AnGL7_0274177-326
AnGL7_0297480-311
FD_25_27, AnGL8 AnGL8_0055879-309
AnGL8_0068978-309
AnGL8_0195671-320
FD_MS_7_1, AnGL28 AnGL28_0279072-324
FD_SO4_25_1_F22, AnGL30 AnGL30_0218172-319
FD_SO4_37_1, AnGL2 AnGL2_0191972-324
FD_YE_25_21, AnGL21 AnGL21_0181671-321
AnGL21_0251879-309
FD_YE_37_3, AnGL26 AnGL26_0243072-320
FD_YE_37_8_2, AnGL3 AnGL3_0148673-320
FD_YE_37_9_2, AnGL4 AnGL4_0006176-306
AnGL4_0175972-322
Syntrophus buswellii, Sbus Sbus_0118272-323
Sbus_02325183-434
Syntrophomonas curvata, Scurva Scurva_0082372-322
Scurva_0106576-304
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0236477-304
Syntrophomonas wolfei methylbutyratica, Swm Swm_0041972-322
Swm_0067076-303
Terrisporobacter hibernicus, AnGL54 AnGL54_0434877-306
AnGL54_0209676-305
FD-25-21, AnGL21 AnGL21_0091797-317
AnGL21_0325280-311
AnGL21_0347977-326
Sunxiuqinia elliptica, AnGL22 AnGL22_0242772-320
Paraclostridium benzoelyticum, AnGL27 AnGL27_0235377-306
AnGL27_0318377-306
FD-MS-7-8, AnGL9 AnGL9_0113972-324
AnGL9_0242477-275
FD-YE-37-9-3, AnGL29 AnGL29_0078676-306
AnGL29_0248472-322
Methylobacterium radiotolerans, GTSA1 PaGL#34_0342174-324
PaGL#34_0425481-311
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0239172-319
Syntrophomonas erecta, GB-438 Ga0610585_0127677-304
Variovorax sp., EBFNA2 PaGL#33_06541167-397
PaGL#33_0060875-326
Variovorax paradoxus, 2u118 PaGL#32_0061575-326
PaGL#32_06196144-374
Dietzia cinnamea, 55 PaGL#56_0091592-299
PaGL#56_0122483-339
Maridesulfovibrio salexigens, AnGL23 AnGL23_0016176-324
Exiguobacterium mexicanum, AnGL24 AnGL24_0176676-306
AnGL24_0277366-315
Clostridium subterminale, CB-LS10-1 AnGL53_0147776-305
Priestia megaterium, 10L1 PaGL#57_0322773-325
PaGL#57_0448789-332
PaGL#57_0466677-306
Variovorax paradoxus, SPNA7 PaGL#43_0059075-326
PaGL#43_06136167-397
Methanospirillum lacunae, Ki8-1 MLKi8_00455159-388
MLKi8_0345974-325
Geodermatophilus sp., RDM14 PaGL#36_0185779-333
PaGL#36_0367384-292
Methylorubrum populi, CTY4 PaGL#39_0266976-306
PaGL#39_0459875-324
Fictibacillus phosphorivorans, TY7 PaGL#38_0280373-326
PaGL#38_0287677-306
Methanospirillum hungatei, GP1 MhGP1_0019873-322
MhGP1_00674159-388
Methanospirillum stamsii, Pt1 MLKi8_0050274-324
MLKi8_00923159-387
Syntrophomonas wolfei, saponavida Swsap_0038269-298
Swsap_0151473-325
Swsap_0253181-338
Swsap_0285772-323
Bacillus subtilis, 30VD-1 PaGL#66_0035877-306
PaGL#66_0203170-322
Peribacillus frigoritolerans, 30N-5 PaGL#67_0232877-306
PaGL#67_0412972-323
Micromonospora inositola, Utrum1 PaGL#61_0097079-295
PaGL#61_0541980-334
Sphingomonas sp., CR2A3 PaGL#62_0033871-320
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0117777-306
AnGL54_0289976-305
Niallia taxi, AG-1 PaGL#37_0221772-322
PaGL#37_0257779-308
Methanospirillum.hungatei GP1, MhGP1 8064048905:MhGP1_02228159-388
8064049390:MhGP1_0270473-322
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112759:Mhun_0275574-324
Ga0065338_113251:Mhun_03248159-388
MPOB, Sfum 639701531:Sfum_0079983-341
639702543:Sfum_0182473-323
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_1108:Spalm_0157071-322
Ga0128340_102172:Spalm_0045378-303
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11384:Swol_0037072-322
Ga0065332_11634:Swol_0062176-303
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14013:Szehn_0231072-322
Ga0124040_12674:Szehn_0130977-305
Syntrophus aciditrophicus, SB 637858745:SYN_00403183-434
637860165:SYN_0173973-323
Syntrophus gentianae, DSM8423 Ga0074853_104102:Sgen_0073884-343
Ga0074853_105135:Sgen_0095573-323
Mucilaginibacter gossypii, cycad 4 PaGL#42_0062649-292
Ruminococcus callidus, ATCC 27760 Rcal_01007279-530

PF07831:PYNP_C. Pyrimidine nucleoside phosphorylase C-terminal domain

Found 51 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516668.1:LOMAGDGF_01592344-417
Clostridium acetobutylicum, DSM 1731 WP_010964854.1:FHOCHPCF_01594344-418
Acetivibrio alkalicellulosi, DSM 17461 2510060468:NJMEOJLD_00716343-418
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946182.1:NEIHKHHH_00302343-418
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11634:GJLLLGJL_00621344-418
Paenibacillus guangzhouensis, KCTC 33171 WP_152394023.1:KDFAKKPF_02749344-421
Clostridium acetobutylicum, ATCC 824 WP_010964854.1:OJAMHIDJ_01599344-418
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696015.1:PROKKA_02032343-415
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01276344-418
FD_25_22, AnGL7 AnGL7_02974352-423
FD_25_27, AnGL8 AnGL8_00558350-423
AnGL8_00689349-422
FD_YE_25_21, AnGL21 AnGL21_02518349-423
FD_YE_37_9_2, AnGL4 AnGL4_00061344-419
Syntrophomonas curvata, Scurva Scurva_01065344-417
Syntrophomonas erecta sporosyntropha, Sespor Sespor_02364344-418
Syntrophomonas wolfei methylbutyratica, Swm Swm_00670344-418
Terrisporobacter hibernicus, AnGL54 AnGL54_04348344-419
AnGL54_02096344-419
FD-25-21, AnGL21 AnGL21_03252352-423
Paraclostridium benzoelyticum, AnGL27 AnGL27_02353344-418
AnGL27_03183344-419
FD-MS-7-8, AnGL9 AnGL9_02424338-412
FD-YE-37-9-3, AnGL29 AnGL29_00786344-419
Methylobacterium radiotolerans, GTSA1 PaGL#34_04254350-419
Syntrophomonas erecta, GB-438 Ga0610585_01276344-418
Variovorax sp., EBFNA2 PaGL#33_06541428-488
Variovorax paradoxus, 2u118 PaGL#32_06196405-468
Dietzia cinnamea, 55 PaGL#56_00915351-421
Exiguobacterium mexicanum, AnGL24 AnGL24_01766344-417
Clostridium subterminale, CB-LS10-1 AnGL53_01477344-418
Priestia megaterium, 10L1 PaGL#57_04666344-416
Variovorax paradoxus, SPNA7 PaGL#43_06136428-491
Methanospirillum lacunae, Ki8-1 MLKi8_00455424-487
Geodermatophilus sp., RDM14 PaGL#36_03673342-413
Methylorubrum populi, CTY4 PaGL#39_02669347-420
Fictibacillus phosphorivorans, TY7 PaGL#38_02876344-418
Methanospirillum hungatei, GP1 MhGP1_00674424-486
Methanospirillum stamsii, Pt1 MLKi8_00923424-487
Syntrophomonas wolfei, saponavida Swsap_00382337-411
Bacillus subtilis, 30VD-1 PaGL#66_00358344-418
Peribacillus frigoritolerans, 30N-5 PaGL#67_02328344-418
Micromonospora inositola, Utrum1 PaGL#61_00970336-411
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01177344-419
AnGL54_02899344-419
Niallia taxi, AG-1 PaGL#37_02577346-419
Methanospirillum.hungatei GP1, MhGP1 8064048905:MhGP1_02228424-486
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113251:Mhun_03248424-487
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_102172:Spalm_00453344-419
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11634:Swol_00621344-418
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12674:Szehn_01309344-417
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