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MLKi8_01155 Locus tags: • Sequence Length: 447

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200250250300300350350400400450450
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MLKi8_01150 MLKi8_01151 MLKi8_01152 MLKi8_01153 MLKi8_01155 MLKi8_01158 MLKi8_01159 MLKi8_01160 
    [PF01964]_[PF02887]

    [13:PF01964]_[22:PF02887]

    [5:IPR036918]_[13:IPR002817]_[22:IPR015795]

Looking for similar signatures in the working genomes

PF01964:ThiC_Rad_SAM. Radical SAM ThiC family

Found 66 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516504.1:LOMAGDGF_016753-421
Clostridium acetobutylicum, DSM 1731 WP_010966296.1:FHOCHPCF_030604-422
Acetivibrio alkalicellulosi, DSM 17461 2510060553:NJMEOJLD_008013-421
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943632.1:NEIHKHHH_053274-422
Ruminococcus albus_7, DSM 20455 WP_013498805.1:HCIAFFOI_022295-422
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11669:GJLLLGJL_006554-422
Paenibacillus guangzhouensis, KCTC 33171 WP_152393098.1:KDFAKKPF_01689124-545
Clostridium acetobutylicum, ATCC 824 WP_010966296.1:OJAMHIDJ_030694-422
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696347.1:PROKKA_016704-422
FD_25_22, AnGL7 AnGL7_03328158-606
FD_MS_7_1, AnGL28 AnGL28_01169161-584
AnGL28_02918132-600
FD_SO4_37_1, AnGL2 AnGL2_00299161-584
AnGL2_02047132-600
FD_YE_37_8_2, AnGL3 AnGL3_013532-420
FD_YE_37_9_2, AnGL4 AnGL4_0274310-428
Syntrophus buswellii, Sbus Sbus_014671-421
Syntrophomonas curvata, Scurva Scurva_006321-418
Syntrophomonas wolfei methylbutyratica, Swm Swm_007094-422
Swm_0285625-338
Terrisporobacter hibernicus, AnGL54 AnGL54_022324-422
FD-25-21, AnGL21 AnGL21_02938158-606
Paraclostridium benzoelyticum, AnGL27 AnGL27_025440-232
FD-MS-7-8, AnGL9 AnGL9_01425108-531
AnGL9_03106132-600
FD-YE-37-9-3, AnGL29 AnGL29_0000110-428
Methylobacterium radiotolerans, GTSA1 PaGL#34_03507129-577
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_04591136-590
Variovorax sp., EBFNA2 PaGL#33_05434132-585
Variovorax paradoxus, 2u118 PaGL#32_04689133-586
Dietzia cinnamea, 55 PaGL#56_00158113-534
Maridesulfovibrio salexigens, AnGL23 AnGL23_008694-421
Clostridium subterminale, CB-LS10-1 AnGL53_028534-422
Priestia megaterium, 10L1 PaGL#57_06990131-552
Variovorax paradoxus, SPNA7 PaGL#43_04831133-586
Methanospirillum lacunae, Ki8-1 MLKi8_0092113-412
MLKi8_023554-408
MLKi8_033333-419
Methylorubrum populi, CTY4 PaGL#39_01478131-579
Fictibacillus phosphorivorans, TY7 PaGL#38_01649136-557
Methanospirillum hungatei, GP1 MhGP1_001223-419
MhGP1_0090210-412
MhGP1_028866-342
Methanospirillum stamsii, Pt1 MLKi8_004093-419
MLKi8_0115513-412
MLKi8_034857-400
Syntrophomonas wolfei, saponavida Swsap_013941-422
Swsap_013951-419
Bacillus subtilis, 30VD-1 PaGL#66_03285132-553
Peribacillus frigoritolerans, 30N-5 PaGL#67_04838135-556
Micromonospora inositola, Utrum1 PaGL#61_0637280-502
Sphingomonas sp., CR2A3 PaGL#62_02748126-570
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_030354-422
Methanospirillum.hungatei GP1, MhGP1 8064046641:MhGP1_000176-342
8064048673:MhGP1_0200010-412
8064049465:MhGP1_027793-419
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112073:Mhun_020724-395
Ga0065338_112680:Mhun_026763-419
Ga0065338_113459:Mhun_0345510-412
MPOB, Sfum 639703547:Sfum_0285059-478
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_102196:Spalm_004764-423
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11669:Swol_006554-422
Syntrophus aciditrophicus, SB 637859595:SYN_011941-421
Syntrophus gentianae, DSM8423 Ga0074853_11143:Sgen_017011-419
Mucilaginibacter gossypii, cycad 4 PaGL#42_01964136-590
Ruminococcus callidus, ATCC 27760 Rcal_024265-423

PF02887:PK_C. Pyruvate kinase, alpha/beta domain

Found 103 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_010963840.1:FHOCHPCF_00563358-469
WP_010964354.1:FHOCHPCF_01089356-469
Acetivibrio alkalicellulosi, DSM 17461 2510060217:NJMEOJLD_00470355-469
Pseudobacteroides cellulosolvens, DSM 2933 WP_036936625.1:NEIHKHHH_03929355-469
Ruminococcus albus_7, DSM 20455 WP_013483908.1:HCIAFFOI_04063356-469
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112183:GJLLLGJL_02138354-468
Paenibacillus guangzhouensis, KCTC 33171 WP_152394649.1:KDFAKKPF_03485355-468
Clostridium acetobutylicum, ATCC 824 WP_010963840.1:OJAMHIDJ_00564358-469
WP_010964354.1:OJAMHIDJ_01092356-469
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698271.1:PROKKA_01188355-469
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01814354-468
OINOEOOJ_0249213-160
FD_25_22, AnGL7 AnGL7_00524359-473
AnGL7_01382359-473
AnGL7_02316359-474
AnGL7_02989352-465
AnGL7_03183359-474
FD_25_27, AnGL8 AnGL8_00094361-478
AnGL8_01337353-462
AnGL8_01911359-474
FD_MS_7_1, AnGL28 AnGL28_03491353-464
FD_SO4_25_1_F22, AnGL30 AnGL30_01010352-453
FD_SO4_37_1, AnGL2 AnGL2_02621353-464
FD_YE_25_21, AnGL21 AnGL21_00945362-478
AnGL21_02783355-468
FD_YE_37_3, AnGL26 AnGL26_03719351-454
FD_YE_37_8_2, AnGL3 AnGL3_00136354-463
AnGL3_00929359-472
FD_YE_37_9_2, AnGL4 AnGL4_02185353-466
AnGL4_02532356-468
Syntrophus buswellii, Sbus Sbus_00187367-462
Sbus_01268375-426
Syntrophomonas curvata, Scurva Scurva_00582354-467
Scurva_0222511-158
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0102313-160
Sespor_01823354-468
Syntrophomonas wolfei methylbutyratica, Swm Swm_02549354-468
Terrisporobacter hibernicus, AnGL54 AnGL54_03468358-472
AnGL54_03584357-470
FD-25-21, AnGL21 AnGL21_01171359-473
AnGL21_02104359-473
AnGL21_03237352-465
Sunxiuqinia elliptica, AnGL22 AnGL22_03715351-454
Paraclostridium benzoelyticum, AnGL27 AnGL27_00926358-472
AnGL27_01016359-473
FD-MS-7-8, AnGL9 AnGL9_00772352-463
FD-YE-37-9-3, AnGL29 AnGL29_02910353-466
AnGL29_03257356-468
Methylobacterium radiotolerans, GTSA1 PaGL#34_00232354-467
PaGL#34_03677354-467
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00713361-474
Syntrophomonas erecta, GB-438 Ga0610585_01814354-468
Ga0610585_0249213-160
Variovorax sp., EBFNA2 PaGL#33_05877366-478
Variovorax paradoxus, 2u118 PaGL#32_04517354-467
PaGL#32_05087366-478
Dietzia cinnamea, 55 PaGL#56_01347356-468
Maridesulfovibrio salexigens, AnGL23 AnGL23_00689362-461
Exiguobacterium mexicanum, AnGL24 AnGL24_01984355-470
Clostridium subterminale, CB-LS10-1 AnGL53_03127356-470
AnGL53_0324213-160
Priestia megaterium, 10L1 PaGL#57_02778357-470
Variovorax paradoxus, SPNA7 PaGL#43_04685354-467
PaGL#43_05283366-478
Methanospirillum lacunae, Ki8-1 MLKi8_0067924-187
MLKi8_0115522-173
MLKi8_01975421-532
Geodermatophilus sp., RDM14 PaGL#36_02000352-465
Methylorubrum populi, CTY4 PaGL#39_02453354-467
PaGL#39_04037354-468
Fictibacillus phosphorivorans, TY7 PaGL#38_03542356-470
Methanospirillum hungatei, GP1 MhGP1_0086223-187
MhGP1_0151026-173
MhGP1_02105369-480
Methanospirillum stamsii, Pt1 MLKi8_0185826-173
MLKi8_02659368-479
Syntrophomonas wolfei, saponavida Swsap_00745354-467
Bacillus subtilis, 30VD-1 PaGL#66_01421357-470
Peribacillus frigoritolerans, 30N-5 PaGL#67_01856357-471
Micromonospora inositola, Utrum1 PaGL#61_05253355-467
Sphingomonas sp., CR2A3 PaGL#62_02236359-473
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00298358-472
AnGL54_00414357-470
Niallia taxi, AG-1 PaGL#37_02965357-471
Methanospirillum.hungatei GP1, MhGP1 8064047443:MhGP1_00798369-480
8064048052:MhGP1_0139226-173
8064048714:MhGP1_0204023-187
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11163:Mhun_0016326-173
Ga0065338_111337:Mhun_01338369-480
MPOB, Sfum 639702242:Sfum_01523368-470
639703731:Sfum_03041377-485
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10629:Spalm_0104213-159
Ga0128340_11484:Spalm_0208322-168
Ga0128340_103126:Spalm_006510-84
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112183:Swol_02138354-468
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_15360:Szehn_02758354-468
Ga0124040_13285:Szehn_0200112-160
Syntrophus aciditrophicus, SB 637859079:SYN_00721375-426
637860418:SYN_0197622-172
Syntrophus gentianae, DSM8423 Ga0074853_10834:Sgen_01341352-452
Ga0074853_10542:Sgen_00862376-465
Mucilaginibacter gossypii, cycad 4 PaGL#42_04277363-474
Ruminococcus callidus, ATCC 27760 Rcal_01622356-469
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