SMPP Home

MLKi8_01219 Locus tags: • Sequence Length: 582

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200250250300300350350400400450450500500550550600600
Show complete sequence
Click domain (colored bar) to show sequence
MLKi8_01214 MLKi8_01215 MLKi8_01216 MLKi8_01217 MLKi8_01219 MLKi8_01220 MLKi8_01223 MLKi8_01224 
    [PF00752]_[PF03485]_[PF00750]_[PF00867]_[PF05746]

    [5:PF00752]_[27:PF03485]_[106:PF00750]_[143:PF00867]_[443:PF05746]

    [0:IPR006085]_[5:IPR006085]_[6:IPR005148]_[21:IPR006084]_[23:IPR029060]_[25:IPR036695]_[27:IPR005148]_[75:IPR006084]_[106:IPR035684]_[108:IPR035684]_[108:IPR001278]_[123:IPR001278]_[139:IPR006084]_[140:IPR006086]_[143:IPR006086]_[147:IPR001278]_[160:IPR006084]_[219:IPR036279]_[221:IPR008918]_[224:IPR006084]_[293:IPR001278]_[439:IPR009080]_[443:IPR008909]_[443:IPR008909]

Looking for similar signatures in the working genomes

PF00752:XPG_N. XPG N-terminal domain

Found 5 similar signatures
Methanospirillum lacunae, Ki8-1 MLKi8_007904-102
Methanospirillum hungatei, GP1 MhGP1_009660-101
Methanospirillum stamsii, Pt1 MLKi8_012195-101
Methanospirillum.hungatei GP1, MhGP1 8064048609:MhGP1_019360-101
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_1156:Mhun_000560-101

PF03485:Arg_tRNA_synt_N. Arginyl tRNA synthetase N terminal domain

Found 68 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513911.1:LOMAGDGF_0268612-99
Clostridium acetobutylicum, DSM 1731 WP_010964359.1:FHOCHPCF_010942-81
Acetivibrio alkalicellulosi, DSM 17461 2510061480:NJMEOJLD_0170411-100
Pseudobacteroides cellulosolvens, DSM 2933 WP_036938466.1:NEIHKHHH_036142-83
WP_036936869.1:NEIHKHHH_0381610-99
Ruminococcus albus_7, DSM 20455 WP_013499029.1:HCIAFFOI_0248212-98
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112586:GJLLLGJL_0254010-98
Paenibacillus guangzhouensis, KCTC 33171 WP_152395186.1:KDFAKKPF_041146-100
WP_152395690.1:KDFAKKPF_0475210-99
Clostridium acetobutylicum, ATCC 824 WP_010964359.1:OJAMHIDJ_010972-81
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697405.1:PROKKA_0347311-99
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0230010-99
FD_25_22, AnGL7 AnGL7_000503-91
FD_25_27, AnGL8 AnGL8_023176-87
FD_MS_7_1, AnGL28 AnGL28_0180416-93
FD_SO4_25_1_F22, AnGL30 AnGL30_013236-88
FD_SO4_37_1, AnGL2 AnGL2_0093316-93
FD_YE_25_21, AnGL21 AnGL21_021466-87
FD_YE_37_3, AnGL26 AnGL26_033255-88
FD_YE_37_8_2, AnGL3 AnGL3_032615-88
FD_YE_37_9_2, AnGL4 AnGL4_027774-89
Syntrophus buswellii, Sbus Sbus_0101721-96
Syntrophomonas curvata, Scurva Scurva_0289310-99
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0121710-99
Syntrophomonas wolfei methylbutyratica, Swm Swm_0292510-98
Terrisporobacter hibernicus, AnGL54 AnGL54_028857-84
FD-25-21, AnGL21 AnGL21_025703-91
Sunxiuqinia elliptica, AnGL22 AnGL22_033215-88
Paraclostridium benzoelyticum, AnGL27 AnGL27_034547-84
FD-MS-7-8, AnGL9 AnGL9_0205015-93
FD-YE-37-9-3, AnGL29 AnGL29_000354-89
Methylobacterium radiotolerans, GTSA1 PaGL#34_030208-94
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0320520-95
Syntrophomonas erecta, GB-438 Ga0610585_0230010-99
Variovorax sp., EBFNA2 PaGL#33_005066-92
Variovorax paradoxus, 2u118 PaGL#32_004966-92
Dietzia cinnamea, 55 PaGL#56_019225-93
Maridesulfovibrio salexigens, AnGL23 AnGL23_033986-87
Exiguobacterium mexicanum, AnGL24 AnGL24_003427-84
Clostridium subterminale, CB-LS10-1 AnGL53_016361-82
AnGL53_020306-86
Priestia megaterium, 10L1 PaGL#57_023589-94
Variovorax paradoxus, SPNA7 PaGL#43_004736-92
Methanospirillum lacunae, Ki8-1 MLKi8_0121927-83
Geodermatophilus sp., RDM14 PaGL#36_034314-92
Methylorubrum populi, CTY4 PaGL#39_030997-94
Fictibacillus phosphorivorans, TY7 PaGL#38_025446-84
PaGL#38_046426-94
Methanospirillum hungatei, GP1 MhGP1_0136525-82
Methanospirillum stamsii, Pt1 MLKi8_0164627-82
Syntrophomonas wolfei, saponavida Swsap_0105510-99
Bacillus subtilis, 30VD-1 PaGL#66_005689-94
Peribacillus frigoritolerans, 30N-5 PaGL#67_004169-94
PaGL#67_012724-82
Micromonospora inositola, Utrum1 PaGL#61_060558-93
PaGL#61_069413-82
Sphingomonas sp., CR2A3 PaGL#62_0131316-94
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_036887-84
Niallia taxi, AG-1 PaGL#37_037727-94
Methanospirillum.hungatei GP1, MhGP1 8064048199:MhGP1_0153825-82
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11391:Mhun_0038918-82
MPOB, Sfum 639701317:Sfum_0057713-94
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10493:Spalm_0078910-99
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112586:Swol_0254010-98
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_104104:Szehn_002149-97
Syntrophus aciditrophicus, SB 637860679:SYN_0222112-96
Syntrophus gentianae, DSM8423 Ga0074853_11751:Sgen_022209-96
Ruminococcus callidus, ATCC 27760 Rcal_0202629-99

PF00750:tRNA-synt_1d. tRNA synthetases class I (R)

Found 73 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513911.1:LOMAGDGF_02686115-411
Clostridium acetobutylicum, DSM 1731 WP_010964359.1:FHOCHPCF_0109491-434
Acetivibrio alkalicellulosi, DSM 17461 2510061480:NJMEOJLD_01704120-412
Pseudobacteroides cellulosolvens, DSM 2933 WP_036938466.1:NEIHKHHH_03614107-436
WP_036936869.1:NEIHKHHH_03816112-407
Ruminococcus albus_7, DSM 20455 WP_013499029.1:HCIAFFOI_02482107-429
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112586:GJLLLGJL_02540112-406
Paenibacillus guangzhouensis, KCTC 33171 WP_152395186.1:KDFAKKPF_04114110-254
WP_152395690.1:KDFAKKPF_04752119-404
Clostridium acetobutylicum, ATCC 824 WP_010964359.1:OJAMHIDJ_0109791-434
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697405.1:PROKKA_03473114-412
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02300115-408
FD_25_22, AnGL7 AnGL7_00050107-452
FD_25_27, AnGL8 AnGL8_0231798-449
FD_MS_7_1, AnGL28 AnGL28_01804104-443
FD_SO4_25_1_F22, AnGL30 AnGL30_01323118-463
FD_SO4_37_1, AnGL2 AnGL2_00933104-443
FD_YE_25_21, AnGL21 AnGL21_0214699-447
FD_YE_37_3, AnGL26 AnGL26_03325107-462
FD_YE_37_8_2, AnGL3 AnGL3_03261117-454
FD_YE_37_9_2, AnGL4 AnGL4_02777108-462
Syntrophus buswellii, Sbus Sbus_01017117-404
Syntrophomonas curvata, Scurva Scurva_02893116-403
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01217115-408
Syntrophomonas wolfei methylbutyratica, Swm Swm_02925111-406
Terrisporobacter hibernicus, AnGL54 AnGL54_0288594-437
FD-25-21, AnGL21 AnGL21_02570107-452
Sunxiuqinia elliptica, AnGL22 AnGL22_03321107-462
Paraclostridium benzoelyticum, AnGL27 AnGL27_0345494-437
FD-MS-7-8, AnGL9 AnGL9_02050106-443
FD-YE-37-9-3, AnGL29 AnGL29_00035108-462
Methylobacterium radiotolerans, GTSA1 PaGL#34_03020122-427
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0309897-448
PaGL#35_03205115-441
Syntrophomonas erecta, GB-438 Ga0610585_02300115-408
Variovorax sp., EBFNA2 PaGL#33_00506102-410
Variovorax paradoxus, 2u118 PaGL#32_00496100-409
Dietzia cinnamea, 55 PaGL#56_01922103-174
241-397
Maridesulfovibrio salexigens, AnGL23 AnGL23_0339895-395
Exiguobacterium mexicanum, AnGL24 AnGL24_0034294-434
Clostridium subterminale, CB-LS10-1 AnGL53_0163692-435
AnGL53_0203099-455
Priestia megaterium, 10L1 PaGL#57_02358105-400
Variovorax paradoxus, SPNA7 PaGL#43_00473100-409
Methanospirillum lacunae, Ki8-1 MLKi8_01219106-430
Geodermatophilus sp., RDM14 PaGL#36_03431114-391
Methylorubrum populi, CTY4 PaGL#39_03099122-178
238-429
Fictibacillus phosphorivorans, TY7 PaGL#38_0254495-434
PaGL#38_04642110-400
Methanospirillum hungatei, GP1 MhGP1_01365100-430
Methanospirillum stamsii, Pt1 MLKi8_01646100-430
Syntrophomonas wolfei, saponavida Swsap_01055113-418
Bacillus subtilis, 30VD-1 PaGL#66_00568103-400
Peribacillus frigoritolerans, 30N-5 PaGL#67_00416105-401
PaGL#67_0127291-430
Micromonospora inositola, Utrum1 PaGL#61_06055118-392
PaGL#61_06941103-444
Sphingomonas sp., CR2A3 PaGL#62_01313104-180
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0368894-437
Niallia taxi, AG-1 PaGL#37_03772104-400
Methanospirillum.hungatei GP1, MhGP1 8064048199:MhGP1_01538100-430
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11391:Mhun_0038999-430
MPOB, Sfum 639701317:Sfum_00577103-407
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10493:Spalm_00789116-408
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112586:Swol_02540112-406
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_104104:Szehn_00214113-407
Syntrophus aciditrophicus, SB 637860679:SYN_02221113-404
Syntrophus gentianae, DSM8423 Ga0074853_11751:Sgen_02220117-405
Mucilaginibacter gossypii, cycad 4 PaGL#42_01131103-172
268-502
Ruminococcus callidus, ATCC 27760 Rcal_02026109-411

PF00867:XPG_I. XPG I-region

Found 5 similar signatures
Methanospirillum lacunae, Ki8-1 MLKi8_00790143-235
Methanospirillum hungatei, GP1 MhGP1_00966143-235
Methanospirillum stamsii, Pt1 MLKi8_01219143-235
Methanospirillum.hungatei GP1, MhGP1 8064048609:MhGP1_01936143-235
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_1156:Mhun_00056143-235

PF05746:DALR_1. DALR anticodon binding domain

Found 98 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513911.1:LOMAGDGF_02686443-564
Clostridium acetobutylicum, DSM 1731 WP_010964359.1:FHOCHPCF_01094447-563
Acetivibrio alkalicellulosi, DSM 17461 2510061480:NJMEOJLD_01704444-565
Pseudobacteroides cellulosolvens, DSM 2933 WP_036938466.1:NEIHKHHH_03614449-565
WP_036936869.1:NEIHKHHH_03816458-579
Ruminococcus albus_7, DSM 20455 WP_013499029.1:HCIAFFOI_02482465-586
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_01587584-680
Ga0065332_112586:GJLLLGJL_02540438-559
Paenibacillus guangzhouensis, KCTC 33171 WP_152395186.1:KDFAKKPF_04114517-636
WP_152395690.1:KDFAKKPF_04752440-561
Clostridium acetobutylicum, ATCC 824 WP_010964359.1:OJAMHIDJ_01097447-563
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697405.1:PROKKA_03473443-564
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00336589-674
OINOEOOJ_02300440-560
FD_25_22, AnGL7 AnGL7_00017580-679
AnGL7_00050465-582
FD_25_27, AnGL8 AnGL8_01078579-675
AnGL8_02317462-578
FD_MS_7_1, AnGL28 AnGL28_01804456-574
FD_SO4_25_1_F22, AnGL30 AnGL30_01323478-598
FD_SO4_37_1, AnGL2 AnGL2_00933456-574
FD_YE_25_21, AnGL21 AnGL21_00008579-677
AnGL21_02146460-577
FD_YE_37_3, AnGL26 AnGL26_03325477-597
FD_YE_37_8_2, AnGL3 AnGL3_03261477-597
FD_YE_37_9_2, AnGL4 AnGL4_02777476-593
Syntrophus buswellii, Sbus Sbus_01017438-559
Syntrophomonas curvata, Scurva Scurva_02094584-676
Scurva_02893438-559
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00669589-674
Sespor_01217440-560
Syntrophomonas wolfei methylbutyratica, Swm Swm_01752584-680
Swm_02925438-559
Terrisporobacter hibernicus, AnGL54 AnGL54_02375581-679
AnGL54_02885450-566
FD-25-21, AnGL21 AnGL21_02570465-582
AnGL21_02604580-679
Sunxiuqinia elliptica, AnGL22 AnGL22_03321477-597
Paraclostridium benzoelyticum, AnGL27 AnGL27_01387580-681
AnGL27_03454450-566
FD-MS-7-8, AnGL9 AnGL9_02050456-574
FD-YE-37-9-3, AnGL29 AnGL29_00035476-593
Methylobacterium radiotolerans, GTSA1 PaGL#34_01308583-686
PaGL#34_03020449-582
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_03098472-588
PaGL#35_03205468-585
Syntrophomonas erecta, GB-438 Ga0610585_00336589-674
Ga0610585_02300440-560
Variovorax sp., EBFNA2 PaGL#33_00506443-561
PaGL#33_05451606-704
Variovorax paradoxus, 2u118 PaGL#32_00496443-561
PaGL#32_04706604-702
Dietzia cinnamea, 55 PaGL#56_01922428-550
Maridesulfovibrio salexigens, AnGL23 AnGL23_01324585-684
AnGL23_03398426-547
Exiguobacterium mexicanum, AnGL24 AnGL24_00342448-560
AnGL24_01911578-673
Clostridium subterminale, CB-LS10-1 AnGL53_01636448-564
AnGL53_02030469-585
Priestia megaterium, 10L1 PaGL#57_02358437-556
Variovorax paradoxus, SPNA7 PaGL#43_00473443-561
PaGL#43_04849604-702
Methanospirillum lacunae, Ki8-1 MLKi8_01219443-555
Geodermatophilus sp., RDM14 PaGL#36_03431428-553
Methylorubrum populi, CTY4 PaGL#39_02800610-713
PaGL#39_03099456-589
Fictibacillus phosphorivorans, TY7 PaGL#38_02544448-560
PaGL#38_04642436-556
Methanospirillum hungatei, GP1 MhGP1_01365443-555
Methanospirillum stamsii, Pt1 MLKi8_01646443-555
Syntrophomonas wolfei, saponavida Swsap_01055439-560
Swsap_02062584-678
Bacillus subtilis, 30VD-1 PaGL#66_00568437-556
Peribacillus frigoritolerans, 30N-5 PaGL#67_00416437-556
PaGL#67_01272444-557
Micromonospora inositola, Utrum1 PaGL#61_06055429-554
PaGL#61_06941457-572
Sphingomonas sp., CR2A3 PaGL#62_01313450-574
PaGL#62_01767638-739
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_03179581-679
AnGL54_03688450-566
Niallia taxi, AG-1 PaGL#37_02715583-677
PaGL#37_03772437-556
Methanospirillum.hungatei GP1, MhGP1 8064048199:MhGP1_01538443-555
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11391:Mhun_00389443-555
MPOB, Sfum 639701317:Sfum_00577435-559
Sfum_02514583-678
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10129:Spalm_00028486-578
Ga0128340_10493:Spalm_00789439-560
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_01587584-680
Ga0065332_112586:Swol_02540438-559
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14415:Szehn_02418585-676
Ga0124040_104104:Szehn_00214438-558
Syntrophus aciditrophicus, SB 637860563:SYN_02109582-678
637860679:SYN_02221438-559
Syntrophus gentianae, DSM8423 Ga0074853_11751:Sgen_02220438-559
Mucilaginibacter gossypii, cycad 4 PaGL#42_01131526-642
Ruminococcus callidus, ATCC 27760 Rcal_02026441-563
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA