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MLKi8_03396 Locus tags: • Sequence Length: 403

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200250250300300350350400400450450
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MLKi8_03393 MLKi8_03396 MLKi8_03397 MLKi8_03398 MLKi8_03399 
    [PF01325]_[PF13784]_[PF02742]_[PF02661]

    [5:PF01325]_[37:PF13784]_[66:PF02742]_[125:PF02661]

    [5:IPR022687]_[5:IPR022687]_[16:IPR036390]_[27:IPR022689]_[37:IPR025758]_[66:IPR001367]_[112:IPR036597]_[124:IPR003812]_[125:IPR003812]

Looking for similar signatures in the working genomes

PF01325:Fe_dep_repress. Iron dependent repressor, N-terminal DNA binding domain

Found 80 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518283.1:LOMAGDGF_0088221-78
WP_003516540.1:LOMAGDGF_016563-55
Clostridium acetobutylicum, DSM 1731 WP_010964778.1:FHOCHPCF_015202-55
WP_010965904.1:FHOCHPCF_0264419-76
Pseudobacteroides cellulosolvens, DSM 2933 WP_036938055.1:NEIHKHHH_0189222-79
WP_050753525.1:NEIHKHHH_032766-63
Ruminococcus albus_7, DSM 20455 WP_013498004.1:HCIAFFOI_013620-58
WP_013498965.1:HCIAFFOI_024183-58
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111638:GJLLLGJL_0160623-80
Paenibacillus guangzhouensis, KCTC 33171 WP_152394082.1:KDFAKKPF_028152-60
Clostridium acetobutylicum, ATCC 824 WP_010964778.1:OJAMHIDJ_015242-55
WP_010965904.1:OJAMHIDJ_0265319-76
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697120.1:PROKKA_000813-57
PROKKA_0076325-82
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0219421-79
FD_MS_7_1, AnGL28 AnGL28_033868-66
FD_SO4_37_1, AnGL2 AnGL2_025168-66
FD_YE_37_3, AnGL26 AnGL26_008700-58
FD_YE_37_8_2, AnGL3 AnGL3_010812-60
FD_YE_37_9_2, AnGL4 AnGL4_027733-59
Syntrophus buswellii, Sbus Sbus_027866-62
Syntrophomonas curvata, Scurva Scurva_0253624-80
Scurva_025514-60
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0137821-79
Syntrophomonas wolfei methylbutyratica, Swm Swm_0178523-80
Swm_021037-63
Terrisporobacter hibernicus, AnGL54 AnGL54_0453517-75
AnGL54_017564-56
Sunxiuqinia elliptica, AnGL22 AnGL22_008710-58
Paraclostridium benzoelyticum, AnGL27 AnGL27_0285518-75
FD-MS-7-8, AnGL9 AnGL9_008234-62
FD-YE-37-9-3, AnGL29 AnGL29_000313-59
Methylobacterium radiotolerans, GTSA1 PaGL#34_0189234-90
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0074714-72
PaGL#35_030295-60
Syntrophomonas erecta, GB-438 Ga0610585_0219421-79
Dietzia cinnamea, 55 PaGL#56_0088310-67
PaGL#56_014742-62
Exiguobacterium mexicanum, AnGL24 AnGL24_018482-60
Clostridium subterminale, CB-LS10-1 AnGL53_005602-60
AnGL53_0157121-78
AnGL53_017414-56
Priestia megaterium, 10L1 PaGL#57_030712-60
Methanospirillum lacunae, Ki8-1 MLKi8_030658-64
MLKi8_033965-64
Geodermatophilus sp., RDM14 PaGL#36_029162-62
Methylorubrum populi, CTY4 PaGL#39_0366075-130
Fictibacillus phosphorivorans, TY7 PaGL#38_029623-60
Methanospirillum hungatei, GP1 MhGP1_0052712-59
MhGP1_030076-66
MhGP1_030205-64
Methanospirillum stamsii, Pt1 MLKi8_000648-67
MLKi8_000986-64
MLKi8_002166-66
MLKi8_0076221-59
Syntrophomonas wolfei, saponavida Swsap_009013-62
Swsap_0299822-79
Bacillus subtilis, 30VD-1 PaGL#66_018390-60
Peribacillus frigoritolerans, 30N-5 PaGL#67_026142-60
Micromonospora inositola, Utrum1 PaGL#61_018543-63
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0136517-75
AnGL54_025604-56
Niallia taxi, AG-1 PaGL#37_024482-60
Methanospirillum.hungatei GP1, MhGP1 8064049054:MhGP1_0237512-59
8064049817:MhGP1_031265-64
8064049831:MhGP1_031396-66
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112263:Mhun_022605-64
Ga0065338_112274:Mhun_022715-64
Ga0065338_112297:Mhun_022926-65
Ga0065338_113068:Mhun_0306724-62
MPOB, Sfum 639704378:Sfum_0369319-76
639704541:Sfum_038649-67
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_0016923-80
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111638:Swol_0160623-80
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_11313:Szehn_0086123-80
Ga0124040_109141:Szehn_007123-61
Syntrophus gentianae, DSM8423 Ga0074853_12927:Sgen_028246-62
Mucilaginibacter gossypii, cycad 4 PaGL#42_012855-60
PaGL#42_052292-62
Ruminococcus callidus, ATCC 27760 Rcal_016294-55

PF13784:Fic_N. Fic/DOC family N-terminal

Found 17 similar signatures
FD_MS_7_1, AnGL28 AnGL28_010160-53
FD_SO4_37_1, AnGL2 AnGL2_001460-53
FD_YE_37_3, AnGL26 AnGL26_0248235-116
FD_YE_37_8_2, AnGL3 AnGL3_0050035-116
Sunxiuqinia elliptica, AnGL22 AnGL22_0247935-116
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0188626-108
PaGL#35_0626838-119
Dietzia cinnamea, 55 PaGL#56_0044060-137
Exiguobacterium mexicanum, AnGL24 AnGL24_0227522-101
Methanospirillum lacunae, Ki8-1 MLKi8_0260623-66
Methanospirillum hungatei, GP1 MhGP1_0202123-106
Methanospirillum stamsii, Pt1 MLKi8_0216638-118
MLKi8_0339637-117
Methanospirillum.hungatei GP1, MhGP1 8064047527:MhGP1_0088223-106
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112700:Mhun_0269638-118
MPOB, Sfum 639702823:Sfum_0211738-117
Mucilaginibacter gossypii, cycad 4 PaGL#42_0411438-119

PF02742:Fe_dep_repr_C. Iron dependent repressor, metal binding and dimerisation domain

Found 84 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518283.1:LOMAGDGF_0088282-144
WP_003516540.1:LOMAGDGF_0165663-121
Clostridium acetobutylicum, DSM 1731 WP_010964778.1:FHOCHPCF_0152061-120
WP_010965904.1:FHOCHPCF_0264482-141
Pseudobacteroides cellulosolvens, DSM 2933 WP_036938055.1:NEIHKHHH_0189283-147
WP_050753525.1:NEIHKHHH_0327667-123
Ruminococcus albus_7, DSM 20455 WP_013498965.1:HCIAFFOI_0241863-119
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111638:GJLLLGJL_0160685-144
Paenibacillus guangzhouensis, KCTC 33171 WP_152394082.1:KDFAKKPF_0281562-126
Clostridium acetobutylicum, ATCC 824 WP_010964778.1:OJAMHIDJ_0152461-120
WP_010965904.1:OJAMHIDJ_0265382-141
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697120.1:PROKKA_0008163-119
PROKKA_0076386-148
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0219483-145
FD_MS_7_1, AnGL28 AnGL28_0338670-133
FD_SO4_37_1, AnGL2 AnGL2_0251670-133
FD_YE_37_3, AnGL26 AnGL26_0087062-132
FD_YE_37_8_2, AnGL3 AnGL3_0108162-132
AnGL3_01083106-176
FD_YE_37_9_2, AnGL4 AnGL4_0277363-121
Syntrophus buswellii, Sbus Sbus_0278667-134
Syntrophomonas curvata, Scurva Scurva_0253686-146
Scurva_0255165-122
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0137883-145
Syntrophomonas wolfei methylbutyratica, Swm Swm_0178585-146
Swm_0210367-133
Terrisporobacter hibernicus, AnGL54 AnGL54_0453579-140
AnGL54_0175663-119
Sunxiuqinia elliptica, AnGL22 AnGL22_0087162-132
Paraclostridium benzoelyticum, AnGL27 AnGL27_0285581-139
FD-MS-7-8, AnGL9 AnGL9_0082366-129
FD-YE-37-9-3, AnGL29 AnGL29_0003163-121
Methylobacterium radiotolerans, GTSA1 PaGL#34_0189292-147
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0074774-143
PaGL#35_0302962-132
Syntrophomonas erecta, GB-438 Ga0610585_0219483-145
Dietzia cinnamea, 55 PaGL#56_0088372-142
PaGL#56_0147464-133
Exiguobacterium mexicanum, AnGL24 AnGL24_0184862-125
Clostridium subterminale, CB-LS10-1 AnGL53_0056064-122
AnGL53_0157182-139
AnGL53_0174163-118
Priestia megaterium, 10L1 PaGL#57_0307162-123
Methanospirillum lacunae, Ki8-1 MLKi8_0197663-119
MLKi8_0306566-126
MLKi8_0339666-129
Geodermatophilus sp., RDM14 PaGL#36_0291666-133
Methylorubrum populi, CTY4 PaGL#39_03660132-186
Fictibacillus phosphorivorans, TY7 PaGL#38_0296263-125
Methanospirillum hungatei, GP1 MhGP1_0052763-125
MhGP1_0210665-127
MhGP1_0300769-129
MhGP1_0302066-128
Methanospirillum stamsii, Pt1 MLKi8_0006469-132
MLKi8_0009866-127
MLKi8_0021669-128
MLKi8_0076263-126
MLKi8_0266081-145
Syntrophomonas wolfei, saponavida Swsap_0090164-128
Swsap_0299885-141
Bacillus subtilis, 30VD-1 PaGL#66_0183962-125
Peribacillus frigoritolerans, 30N-5 PaGL#67_0261462-125
Micromonospora inositola, Utrum1 PaGL#61_0185465-134
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0136579-140
AnGL54_0256063-119
Niallia taxi, AG-1 PaGL#37_0244862-124
Methanospirillum.hungatei GP1, MhGP1 8064047442:MhGP1_0079765-127
8064049054:MhGP1_0237563-125
8064049817:MhGP1_0312666-128
8064049831:MhGP1_0313969-129
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111338:Mhun_0133965-126
Ga0065338_112263:Mhun_0226066-128
Ga0065338_112274:Mhun_0227166-131
Ga0065338_112297:Mhun_0229269-127
Ga0065338_113068:Mhun_0306766-128
MPOB, Sfum 639704378:Sfum_0369380-146
639704541:Sfum_0386471-138
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111638:Swol_0160685-144
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_11313:Szehn_0086184-147
Ga0124040_109141:Szehn_0071265-122
Syntrophus gentianae, DSM8423 Ga0074853_12927:Sgen_0282467-134
Mucilaginibacter gossypii, cycad 4 PaGL#42_0128562-132
PaGL#42_0522964-133
Ruminococcus callidus, ATCC 27760 Rcal_0162963-122

PF02661:Fic. Fic/DOC family

Found 102 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510061371:NJMEOJLD_015953-85
2510061618:NJMEOJLD_01835123-239
Pseudobacteroides cellulosolvens, DSM 2933 WP_036937344.1:NEIHKHHH_04323152-249
Ruminococcus albus_7, DSM 20455 WP_037304460.1:HCIAFFOI_0140841-128
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_0017294-191
Ga0065332_112436:GJLLLGJL_023906-88
Ga0065332_112719:GJLLLGJL_02671107-214
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_171003595.1:PROKKA_00761139-242
WP_137698026.1:PROKKA_0079097-192
WP_137697011.1:PROKKA_0305292-188
PROKKA_011142-81
FD_25_22, AnGL7 AnGL7_01630311-405
AnGL7_01633110-223
FD_25_27, AnGL8 AnGL8_00828216-311
AnGL8_02113110-223
AnGL8_02465103-199
AnGL8_0276050-145
FD_MS_7_1, AnGL28 AnGL28_00121188-295
AnGL28_0101660-166
AnGL28_0337762-162
FD_SO4_37_1, AnGL2 AnGL2_0014660-166
AnGL2_0250762-162
AnGL2_02800188-295
FD_YE_25_21, AnGL21 AnGL21_03452314-403
FD_YE_37_3, AnGL26 AnGL26_0219598-194
AnGL26_02482121-227
AnGL26_04040247-355
FD_YE_37_8_2, AnGL3 AnGL3_00496237-280
AnGL3_00500121-227
AnGL3_01057173-280
Syntrophus buswellii, Sbus Sbus_00536123-181
Sbus_02189100-196
Sbus_022241-59
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01926107-215
Syntrophomonas wolfei methylbutyratica, Swm Swm_01969110-215
Swm_027670-46
Swm_027756-88
Terrisporobacter hibernicus, AnGL54 AnGL54_0132783-179
Sunxiuqinia elliptica, AnGL22 AnGL22_0219298-194
AnGL22_02479121-227
AnGL22_04036247-355
Paraclostridium benzoelyticum, AnGL27 AnGL27_00059100-206
Methylobacterium radiotolerans, GTSA1 PaGL#34_01844121-226
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01886119-214
PaGL#35_01887111-222
PaGL#35_0416087-195
PaGL#35_05364399-471
PaGL#35_06268163-233
Variovorax sp., EBFNA2 PaGL#33_0000456-149
PaGL#33_012679-90
PaGL#33_04247118-230
Variovorax paradoxus, 2u118 PaGL#32_05469230-334
PaGL#32_00941399-472
Dietzia cinnamea, 55 PaGL#56_00166111-211
PaGL#56_00440144-258
PaGL#56_0044649-147
PaGL#56_02079224-269
Maridesulfovibrio salexigens, AnGL23 AnGL23_0098676-167
AnGL23_0184190-188
AnGL23_03098101-199
AnGL23_033425-83
Exiguobacterium mexicanum, AnGL24 AnGL24_03079106-214
AnGL24_02275107-232
AnGL24_0241089-187
Clostridium subterminale, CB-LS10-1 AnGL53_0240093-188
Variovorax paradoxus, SPNA7 PaGL#43_03768114-228
Methanospirillum lacunae, Ki8-1 MLKi8_02897177-284
MLKi8_0334135-78
Geodermatophilus sp., RDM14 PaGL#36_0302227-83
Methylorubrum populi, CTY4 PaGL#39_024671-30
Fictibacillus phosphorivorans, TY7 PaGL#38_0020150-154
Methanospirillum hungatei, GP1 MhGP1_02021112-216
MhGP1_02527177-284
Methanospirillum stamsii, Pt1 MLKi8_01670178-284
MLKi8_02166123-229
MLKi8_03396125-228
Syntrophomonas wolfei, saponavida Swsap_0185592-190
Swsap_0190490-195
Swsap_033880-100
Sphingomonas sp., CR2A3 PaGL#62_031009-87
PaGL#62_0359457-149
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0205583-179
Niallia taxi, AG-1 PaGL#37_0551054-148
Methanospirillum.hungatei GP1, MhGP1 8064047009:MhGP1_00376177-284
8064047527:MhGP1_00882112-216
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112700:Mhun_02696123-228
MPOB, Sfum 639702823:Sfum_02117123-229
639704636:Sfum_03958100-196
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_0173993-190
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_0017294-191
Ga0065332_112436:Swol_023906-88
Ga0065332_112719:Swol_02671107-214
Syntrophus gentianae, DSM8423 Ga0074853_1027:Sgen_00218125-181
Ga0074853_11746:Sgen_02215115-224
Ga0074853_10795:Sgen_0125579-188
Mucilaginibacter gossypii, cycad 4 PaGL#42_04114159-233
PaGL#42_05044112-223
PaGL#42_0565086-195
Ruminococcus callidus, ATCC 27760 Rcal_0030330-117
Rcal_0063985-183
Rcal_017943-85
Rcal_0219130-117
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