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PaGL#62_03075 Locus tags: • Sequence Length: 743

Sphingomonas sp., CR2A3 Batch4_genome_fasta/bc2036

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PaGL#62_03073 PaGL#62_03074 PaGL#62_03075 PaGL#62_03076 PaGL#62_03079 
    [PF01653]_[PF03120]_[PF03119]_[PF00533]

    [10:PF01653]_[331:PF03120]_[415:PF03119]_[634:PF00533]

    [9:IPR013840]_[10:IPR013839]_[21:IPR013839]_[328:IPR012340]_[331:IPR004150]_[412:IPR010994]_[415:IPR004149]_[627:IPR001357]_[629:IPR001357]_[632:IPR036420]_[634:IPR001357]

Looking for similar signatures in the working genomes

PF01653:DNA_ligase_aden. NAD-dependent DNA ligase adenylation domain

Found 67 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515625.1:LOMAGDGF_012231-312
Clostridium acetobutylicum, DSM 1731 WP_010964508.1:FHOCHPCF_012502-314
WP_013913654.1:FHOCHPCF_027259-321
Acetivibrio alkalicellulosi, DSM 17461 2510060538:NJMEOJLD_007851-312
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946287.1:NEIHKHHH_003681-311
Ruminococcus albus_7, DSM 20455 WP_013498398.1:HCIAFFOI_017965-315
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11395:GJLLLGJL_003811-311
Paenibacillus guangzhouensis, KCTC 33171 WP_152397377.1:KDFAKKPF_0446120-336
Clostridium acetobutylicum, ATCC 824 WP_010964508.1:OJAMHIDJ_012532-314
WP_010965961.1:OJAMHIDJ_027339-321
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696334.1:PROKKA_016848-302
Syntrophomonas erecta, DSM 16215 OINOEOOJ_003945-312
FD_25_22, AnGL7 AnGL7_022831-314
FD_25_27, AnGL8 AnGL8_0197244-223
247-302
FD_MS_7_1, AnGL28 AnGL28_006625-319
AnGL28_0236841-337
FD_SO4_25_1_F22, AnGL30 AnGL30_0215761-370
FD_SO4_37_1, AnGL2 AnGL2_0149741-337
AnGL2_033415-319
FD_YE_25_21, AnGL21 AnGL21_007754-319
FD_YE_37_3, AnGL26 AnGL26_042314-316
FD_YE_37_8_2, AnGL3 AnGL3_002207-315
FD_YE_37_9_2, AnGL4 AnGL4_003544-297
Syntrophus buswellii, Sbus Sbus_015615-321
Syntrophomonas curvata, Scurva Scurva_008354-312
Syntrophomonas erecta sporosyntropha, Sespor Sespor_006095-312
Syntrophomonas wolfei methylbutyratica, Swm Swm_004291-311
Terrisporobacter hibernicus, AnGL54 AnGL54_034901-311
FD-25-21, AnGL21 AnGL21_003221-314
Sunxiuqinia elliptica, AnGL22 AnGL22_042274-316
Paraclostridium benzoelyticum, AnGL27 AnGL27_009411-311
FD-MS-7-8, AnGL9 AnGL9_0056914-313
AnGL9_009695-319
FD-YE-37-9-3, AnGL29 AnGL29_010794-297
Methylobacterium radiotolerans, GTSA1 PaGL#34_0011316-333
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_016294-316
Syntrophomonas erecta, GB-438 Ga0610585_003945-312
Variovorax sp., EBFNA2 PaGL#33_030876-335
Variovorax paradoxus, 2u118 PaGL#32_024286-335
Dietzia cinnamea, 55 PaGL#56_0186918-337
Maridesulfovibrio salexigens, AnGL23 AnGL23_014632-137
Exiguobacterium mexicanum, AnGL24 AnGL24_005761-310
Clostridium subterminale, CB-LS10-1 AnGL53_025515-319
Priestia megaterium, 10L1 PaGL#57_019474-314
PaGL#57_012401-188
204-330
Variovorax paradoxus, SPNA7 PaGL#43_026766-335
Geodermatophilus sp., RDM14 PaGL#36_0335938-350
Methylorubrum populi, CTY4 PaGL#39_0457017-333
Fictibacillus phosphorivorans, TY7 PaGL#38_007274-314
Syntrophomonas wolfei, saponavida Swsap_005844-312
Bacillus subtilis, 30VD-1 PaGL#66_035174-314
Peribacillus frigoritolerans, 30N-5 PaGL#67_052025-314
Micromonospora inositola, Utrum1 PaGL#61_0155331-347
Sphingomonas sp., CR2A3 PaGL#62_0307510-329
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_003201-311
Niallia taxi, AG-1 PaGL#37_004245-314
MPOB, Sfum 639702196:Sfum_014745-323
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11022:Spalm_015843-310
Ga0128340_10234:Spalm_003162-291
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11395:Swol_003811-311
Syntrophomonas zehnderi, OL-4 Szehn Szehn_024643-312
Syntrophus aciditrophicus, SB 637859902:SYN_014925-322
Syntrophus gentianae, DSM8423 Ga0074853_11073:Sgen_016156-322
Mucilaginibacter gossypii, cycad 4 PaGL#42_038364-316
Ruminococcus callidus, ATCC 27760 Rcal_011714-315

PF03120:DNA_ligase_OB. NAD-dependent DNA ligase OB-fold domain

Found 65 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515625.1:LOMAGDGF_01223314-392
Clostridium acetobutylicum, DSM 1731 WP_010964508.1:FHOCHPCF_01250316-391
WP_013913654.1:FHOCHPCF_02725323-398
Acetivibrio alkalicellulosi, DSM 17461 2510060538:NJMEOJLD_00785314-390
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946287.1:NEIHKHHH_00368313-390
Ruminococcus albus_7, DSM 20455 WP_013498398.1:HCIAFFOI_01796318-392
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11395:GJLLLGJL_00381313-391
Paenibacillus guangzhouensis, KCTC 33171 WP_152397377.1:KDFAKKPF_04461338-418
Clostridium acetobutylicum, ATCC 824 WP_010964508.1:OJAMHIDJ_01253316-391
WP_010965961.1:OJAMHIDJ_02733323-398
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696334.1:PROKKA_01684306-378
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00394315-392
FD_25_22, AnGL7 AnGL7_02283317-392
FD_25_27, AnGL8 AnGL8_01972308-378
FD_MS_7_1, AnGL28 AnGL28_00662321-399
AnGL28_02368342-419
FD_SO4_25_1_F22, AnGL30 AnGL30_02157373-447
FD_SO4_37_1, AnGL2 AnGL2_01497342-419
AnGL2_03341321-399
FD_YE_25_21, AnGL21 AnGL21_00775322-399
FD_YE_37_3, AnGL26 AnGL26_04231319-396
FD_YE_37_8_2, AnGL3 AnGL3_00220318-393
FD_YE_37_9_2, AnGL4 AnGL4_00354302-374
Syntrophus buswellii, Sbus Sbus_01561324-402
Syntrophomonas curvata, Scurva Scurva_00835314-392
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00609315-392
Syntrophomonas wolfei methylbutyratica, Swm Swm_00429313-391
Terrisporobacter hibernicus, AnGL54 AnGL54_03490313-391
FD-25-21, AnGL21 AnGL21_00322317-392
Sunxiuqinia elliptica, AnGL22 AnGL22_04227319-396
Paraclostridium benzoelyticum, AnGL27 AnGL27_00941314-391
FD-MS-7-8, AnGL9 AnGL9_00569317-394
AnGL9_00969322-399
FD-YE-37-9-3, AnGL29 AnGL29_01079302-374
Methylobacterium radiotolerans, GTSA1 PaGL#34_00113335-424
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01629319-396
Syntrophomonas erecta, GB-438 Ga0610585_00394315-392
Variovorax sp., EBFNA2 PaGL#33_03087338-410
Variovorax paradoxus, 2u118 PaGL#32_02428338-410
Dietzia cinnamea, 55 PaGL#56_01869340-417
Maridesulfovibrio salexigens, AnGL23 AnGL23_01463273-347
Exiguobacterium mexicanum, AnGL24 AnGL24_00576313-390
Clostridium subterminale, CB-LS10-1 AnGL53_02551321-395
Priestia megaterium, 10L1 PaGL#57_01947317-394
PaGL#57_01240333-407
Variovorax paradoxus, SPNA7 PaGL#43_02676338-411
Geodermatophilus sp., RDM14 PaGL#36_03359352-430
Methylorubrum populi, CTY4 PaGL#39_04570336-424
Fictibacillus phosphorivorans, TY7 PaGL#38_00727317-394
Syntrophomonas wolfei, saponavida Swsap_00584314-392
Bacillus subtilis, 30VD-1 PaGL#66_03517317-394
Peribacillus frigoritolerans, 30N-5 PaGL#67_05202317-394
Micromonospora inositola, Utrum1 PaGL#61_01553349-427
Sphingomonas sp., CR2A3 PaGL#62_03075331-405
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00320313-391
Niallia taxi, AG-1 PaGL#37_00424317-394
MPOB, Sfum 639702196:Sfum_01474327-403
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11022:Spalm_01584312-390
Ga0128340_10234:Spalm_00316295-371
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11395:Swol_00381313-391
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02464314-392
Syntrophus aciditrophicus, SB 637859902:SYN_01492325-403
Syntrophus gentianae, DSM8423 Ga0074853_11073:Sgen_01615325-402
Mucilaginibacter gossypii, cycad 4 PaGL#42_03836318-396
Ruminococcus callidus, ATCC 27760 Rcal_01171317-389

PF03119:DNA_ligase_ZBD. NAD-dependent DNA ligase C4 zinc finger domain

Found 49 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515625.1:LOMAGDGF_01223400-427
Acetivibrio alkalicellulosi, DSM 17461 2510060538:NJMEOJLD_00785400-427
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946287.1:NEIHKHHH_00368400-424
Ruminococcus albus_7, DSM 20455 WP_013498398.1:HCIAFFOI_01796400-427
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11395:GJLLLGJL_00381399-426
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00394401-427
FD_25_22, AnGL7 AnGL7_02283404-431
FD_MS_7_1, AnGL28 AnGL28_00662407-434
FD_SO4_25_1_F22, AnGL30 AnGL30_02157458-485
FD_SO4_37_1, AnGL2 AnGL2_03341407-434
FD_YE_25_21, AnGL21 AnGL21_00775407-435
FD_YE_37_3, AnGL26 AnGL26_04231404-430
FD_YE_37_8_2, AnGL3 AnGL3_00220403-430
Syntrophus buswellii, Sbus Sbus_01561410-437
Syntrophomonas curvata, Scurva Scurva_00835401-427
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00609401-427
Syntrophomonas wolfei methylbutyratica, Swm Swm_00429399-426
Terrisporobacter hibernicus, AnGL54 AnGL54_03490399-426
FD-25-21, AnGL21 AnGL21_00322404-431
Sunxiuqinia elliptica, AnGL22 AnGL22_04227404-430
Paraclostridium benzoelyticum, AnGL27 AnGL27_00941399-426
FD-MS-7-8, AnGL9 AnGL9_00969407-434
Methylobacterium radiotolerans, GTSA1 PaGL#34_00113433-466
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01629404-430
Syntrophomonas erecta, GB-438 Ga0610585_00394401-427
Variovorax sp., EBFNA2 PaGL#33_03087427-455
Variovorax paradoxus, 2u118 PaGL#32_02428427-455
Dietzia cinnamea, 55 PaGL#56_01869425-454
Exiguobacterium mexicanum, AnGL24 AnGL24_00576398-425
Priestia megaterium, 10L1 PaGL#57_01947402-429
Variovorax paradoxus, SPNA7 PaGL#43_02676427-455
Geodermatophilus sp., RDM14 PaGL#36_03359438-467
Methylorubrum populi, CTY4 PaGL#39_04570432-466
Fictibacillus phosphorivorans, TY7 PaGL#38_00727402-429
Syntrophomonas wolfei, saponavida Swsap_00584400-427
Bacillus subtilis, 30VD-1 PaGL#66_03517402-429
Peribacillus frigoritolerans, 30N-5 PaGL#67_05202402-429
Micromonospora inositola, Utrum1 PaGL#61_01553435-464
Sphingomonas sp., CR2A3 PaGL#62_03075415-443
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00320399-426
Niallia taxi, AG-1 PaGL#37_00424402-429
MPOB, Sfum 639702196:Sfum_01474412-439
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11022:Spalm_01584398-425
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11395:Swol_00381399-426
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02464401-427
Syntrophus aciditrophicus, SB 637859902:SYN_01492411-438
Syntrophus gentianae, DSM8423 Ga0074853_11073:Sgen_01615411-438
Mucilaginibacter gossypii, cycad 4 PaGL#42_03836404-431
Ruminococcus callidus, ATCC 27760 Rcal_01171402-428

PF00533:BRCT. BRCA1 C Terminus (BRCT) domain

Found 72 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515625.1:LOMAGDGF_01223588-662
Clostridium acetobutylicum, DSM 1731 WP_010964056.1:FHOCHPCF_00784220-304
WP_010964508.1:FHOCHPCF_01250584-659
WP_013913654.1:FHOCHPCF_02725591-666
Acetivibrio alkalicellulosi, DSM 17461 2510060538:NJMEOJLD_00785588-662
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946287.1:NEIHKHHH_00368589-659
Ruminococcus albus_7, DSM 20455 WP_013498398.1:HCIAFFOI_01796585-658
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11395:GJLLLGJL_00381584-657
Paenibacillus guangzhouensis, KCTC 33171 WP_152397377.1:KDFAKKPF_04461609-684
Clostridium acetobutylicum, ATCC 824 WP_010964056.1:OJAMHIDJ_00787220-304
WP_010964508.1:OJAMHIDJ_01253584-659
WP_010965961.1:OJAMHIDJ_02733591-666
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696334.1:PROKKA_01684575-651
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00394584-659
FD_25_22, AnGL7 AnGL7_02283589-663
AnGL7_03643114-174
FD_25_27, AnGL8 AnGL8_01972574-640
FD_MS_7_1, AnGL28 AnGL28_00662592-664
FD_SO4_25_1_F22, AnGL30 AnGL30_02157645-721
FD_SO4_37_1, AnGL2 AnGL2_03341592-664
FD_YE_25_21, AnGL21 AnGL21_00775595-669
FD_YE_37_3, AnGL26 AnGL26_04231591-667
FD_YE_37_8_2, AnGL3 AnGL3_00220592-665
FD_YE_37_9_2, AnGL4 AnGL4_00354576-650
Syntrophus buswellii, Sbus Sbus_01561596-668
Syntrophomonas curvata, Scurva Scurva_00835586-659
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00609584-659
Syntrophomonas wolfei methylbutyratica, Swm Swm_00429584-657
Terrisporobacter hibernicus, AnGL54 AnGL54_04336216-264
AnGL54_03490586-655
FD-25-21, AnGL21 AnGL21_00322589-663
AnGL21_02644112-179
Sunxiuqinia elliptica, AnGL22 AnGL22_04227591-667
Paraclostridium benzoelyticum, AnGL27 AnGL27_00941586-660
FD-MS-7-8, AnGL9 AnGL9_00969593-665
AnGL9_0143414-80
FD-YE-37-9-3, AnGL29 AnGL29_01079576-650
Methylobacterium radiotolerans, GTSA1 PaGL#34_00113735-805
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01629594-669
Syntrophomonas erecta, GB-438 Ga0610585_00394584-659
Variovorax sp., EBFNA2 PaGL#33_03087613-685
Variovorax paradoxus, 2u118 PaGL#32_02428613-687
Dietzia cinnamea, 55 PaGL#56_01869635-706
Maridesulfovibrio salexigens, AnGL23 AnGL23_01463537-610
Exiguobacterium mexicanum, AnGL24 AnGL24_00576587-658
Clostridium subterminale, CB-LS10-1 AnGL53_02551590-663
Priestia megaterium, 10L1 PaGL#57_01947592-662
PaGL#57_01121184-256
PaGL#57_01240599-671
Variovorax paradoxus, SPNA7 PaGL#43_02676613-687
Geodermatophilus sp., RDM14 PaGL#36_03359631-700
Methylorubrum populi, CTY4 PaGL#39_04570739-810
Fictibacillus phosphorivorans, TY7 PaGL#38_00727592-664
Syntrophomonas wolfei, saponavida Swsap_00584584-652
Bacillus subtilis, 30VD-1 PaGL#66_03517592-662
Peribacillus frigoritolerans, 30N-5 PaGL#67_05202593-662
Micromonospora inositola, Utrum1 PaGL#61_01553628-698
Sphingomonas sp., CR2A3 PaGL#62_03075634-697
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00320586-655
AnGL54_01165216-264
Niallia taxi, AG-1 PaGL#37_00424592-664
PaGL#37_03696230-313
MPOB, Sfum 639702196:Sfum_01474602-671
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11022:Spalm_01584583-656
Ga0128340_10234:Spalm_00316567-641
Ga0128340_10235:Spalm_003172-71
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11395:Swol_00381584-657
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02464585-659
Syntrophus aciditrophicus, SB 637859902:SYN_01492594-667
Syntrophus gentianae, DSM8423 Ga0074853_11073:Sgen_01615594-667
Mucilaginibacter gossypii, cycad 4 PaGL#42_03836594-669
Ruminococcus callidus, ATCC 27760 Rcal_01171588-658
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