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AnGL54_01326 Locus tags: • Sequence Length: 799

Terrisporobacter hibernicus, CB-LS-10-2 Batch4_genome_fasta/bc2038

5050100100150150200200250250300300350350400400450450500500550550600600650650700700750750800800
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AnGL54_01321 AnGL54_01322 AnGL54_01323 AnGL54_01324 AnGL54_01325 AnGL54_01328 AnGL54_01329 AnGL54_01331 
    [PF02559]_[PF05569]_[PF05569]_[TM]

    [1:PF02559]_[8:PF05569]_[118:PF05569]_[TM]

    [0:IPR003711]_[1:IPR003711]_[8:IPR008756]_[118:IPR008756]_[TM]

Looking for similar signatures in the working genomes

PF02559:CarD_TRCF_RID. CarD-like/TRCF RID domain

Found 92 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515443.1:LOMAGDGF_00225507-603
WP_003514693.1:LOMAGDGF_005071-109
Clostridium acetobutylicum, DSM 1731 WP_010966492.1:FHOCHPCF_03269501-597
Acetivibrio alkalicellulosi, DSM 17461 2510060693:NJMEOJLD_00936519-615
2510061295:NJMEOJLD_015241-109
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942655.1:NEIHKHHH_02628497-593
WP_036939974.1:NEIHKHHH_057231-109
Ruminococcus albus_7, DSM 20455 WP_013499702.1:HCIAFFOI_03222489-584
WP_013497233.1:HCIAFFOI_005101-112
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_00086419-515
Ga0065332_112002:GJLLLGJL_019631-113
Paenibacillus guangzhouensis, KCTC 33171 WP_152395775.1:KDFAKKPF_04856489-585
Clostridium acetobutylicum, ATCC 824 WP_010966492.1:OJAMHIDJ_03278501-597
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697774.1:PROKKA_00513503-599
WP_137697589.1:PROKKA_006481-107
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02133416-512
FD_25_22, AnGL7 AnGL7_01667487-583
FD_25_27, AnGL8 AnGL8_00711489-585
FD_MS_7_1, AnGL28 AnGL28_01263383-477
FD_SO4_25_1_F22, AnGL30 AnGL30_00532433-529
FD_SO4_37_1, AnGL2 AnGL2_00393383-477
FD_YE_25_21, AnGL21 AnGL21_01930480-576
FD_YE_37_3, AnGL26 AnGL26_01662401-497
FD_YE_37_8_2, AnGL3 AnGL3_01290428-524
FD_YE_37_9_2, AnGL4 AnGL4_00814502-598
AnGL4_027511-111
Syntrophus buswellii, Sbus Sbus_01988520-616
Sbus_023122-112
Syntrophomonas curvata, Scurva Scurva_00164437-533
Scurva_007091-111
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01439416-512
Syntrophomonas wolfei methylbutyratica, Swm Swm_00084419-515
Swm_022751-113
Terrisporobacter hibernicus, AnGL54 AnGL54_044961-111
AnGL54_017701-105
AnGL54_03379492-588
FD-25-21, AnGL21 AnGL21_00915487-583
Sunxiuqinia elliptica, AnGL22 AnGL22_01659401-497
Paraclostridium benzoelyticum, AnGL27 AnGL27_00843491-587
AnGL27_010841-110
FD-MS-7-8, AnGL9 AnGL9_02021384-478
FD-YE-37-9-3, AnGL29 AnGL29_000091-111
AnGL29_01539502-598
Methylobacterium radiotolerans, GTSA1 PaGL#34_01920525-617
PaGL#34_0403414-123
PaGL#34_04832437-537
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00501442-538
Syntrophomonas erecta, GB-438 Ga0610585_02133416-512
Variovorax sp., EBFNA2 PaGL#33_02819476-580
Variovorax paradoxus, 2u118 PaGL#32_03004480-584
Dietzia cinnamea, 55 PaGL#56_005892-111
PaGL#56_02144518-622
Maridesulfovibrio salexigens, AnGL23 AnGL23_002951-112
AnGL23_01318488-581
Exiguobacterium mexicanum, AnGL24 AnGL24_001071-110
AnGL24_03029495-591
Clostridium subterminale, CB-LS10-1 AnGL53_020241-109
AnGL53_03438503-599
Priestia megaterium, 10L1 PaGL#57_02188499-595
Variovorax paradoxus, SPNA7 PaGL#43_03057479-583
Geodermatophilus sp., RDM14 PaGL#36_006652-111
PaGL#36_00834512-612
Methylorubrum populi, CTY4 PaGL#39_01186425-519
PaGL#39_0372914-123
PaGL#39_04053527-619
Fictibacillus phosphorivorans, TY7 PaGL#38_00442500-596
Syntrophomonas wolfei, saponavida Swsap_01260460-556
Swsap_030721-113
Bacillus subtilis, 30VD-1 PaGL#66_00129499-595
PaGL#66_036891-110
Peribacillus frigoritolerans, 30N-5 PaGL#67_00210499-595
Micromonospora inositola, Utrum1 PaGL#61_01078529-629
PaGL#61_067592-111
Sphingomonas sp., CR2A3 PaGL#62_00316543-637
PaGL#62_025277-116
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00209492-588
AnGL54_013261-111
AnGL54_025741-105
Niallia taxi, AG-1 PaGL#37_00063502-598
MPOB, Sfum Sfum_03560522-618
639704428:Sfum_037451-111
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_01514415-511
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_00086419-515
Ga0065332_112002:Swol_019631-113
Syntrophomonas zehnderi, OL-4 Szehn Szehn_00440416-512
Syntrophus aciditrophicus, SB 637859216:SYN_00846522-618
637860310:SYN_018721-111
Syntrophus gentianae, DSM8423 Ga0074853_13922:Sgen_031082-112
Ga0074853_11724:Sgen_02193530-626
Mucilaginibacter gossypii, cycad 4 PaGL#42_04657447-543
Ruminococcus callidus, ATCC 27760 Rcal_00358489-584
Rcal_0102313-111

PF05569:Peptidase_M56. BlaR1 peptidase M56

Found 74 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516157.1:LOMAGDGF_007146-280
WP_003511676.1:LOMAGDGF_007326-289
WP_003512663.1:LOMAGDGF_019018-262
WP_235825054.1:LOMAGDGF_023136-66
WP_003517312.1:LOMAGDGF_024308-311
WP_003515817.1:LOMAGDGF_025557-319
Clostridium acetobutylicum, DSM 1731 WP_010966707.1:FHOCHPCF_034919-307
Acetivibrio alkalicellulosi, DSM 17461 2510061059:NJMEOJLD_012917-310
2510063025:NJMEOJLD_032119-317
2510063038:NJMEOJLD_032247-290
2510063431:NJMEOJLD_036107-308
2510064010:NJMEOJLD_041818-264
Pseudobacteroides cellulosolvens, DSM 2933 WP_036936527.1:NEIHKHHH_0397812-318
WP_050753778.1:NEIHKHHH_049488-314
WP_050753842.1:NEIHKHHH_052757-92
106-339
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_0044329-220
Paenibacillus guangzhouensis, KCTC 33171 WP_152393206.1:KDFAKKPF_0181217-339
WP_152395924.1:KDFAKKPF_0503675-229
Clostridium acetobutylicum, ATCC 824 WP_010966707.1:OJAMHIDJ_035039-307
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0203414-325
FD_YE_37_3, AnGL26 AnGL26_00106167-259
FD_YE_37_8_2, AnGL3 AnGL3_03271157-236
AnGL3_03272144-215
FD_YE_37_9_2, AnGL4 AnGL4_021248-280
AnGL4_0265610-304
Syntrophomonas curvata, Scurva Scurva_006007-306
Scurva_022096-281
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0153813-325
Syntrophomonas wolfei methylbutyratica, Swm Swm_0032844-192
Swm_004672-293
Swm_0175513-333
Swm_018056-297
Swm_0219819-170
Swm_027036-314
Terrisporobacter hibernicus, AnGL54 AnGL54_013268-98
118-354
AnGL54_023127-322
Sunxiuqinia elliptica, AnGL22 AnGL22_00106167-259
Paraclostridium benzoelyticum, AnGL27 AnGL27_015114-173
AnGL27_023148-282
FD-YE-37-9-3, AnGL29 AnGL29_028498-280
AnGL29_0338110-304
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00036144-240
PaGL#35_02846143-258
PaGL#35_05062155-253
PaGL#35_0603625-300
Syntrophomonas erecta, GB-438 Ga0610585_0203414-325
Priestia megaterium, 10L1 PaGL#57_0429561-246
Syntrophomonas wolfei, saponavida Swsap_007034-280
Swsap_007147-278
Swsap_016427-289
Swsap_031816-303
Peribacillus frigoritolerans, 30N-5 PaGL#67_0115411-304
PaGL#67_0302958-246
Sphingomonas sp., CR2A3 PaGL#62_0309486-281
PaGL#62_035825-275
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_020548-98
118-354
AnGL54_031157-322
Niallia taxi, AG-1 PaGL#37_051267-312
PaGL#37_0171062-242
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_0044329-220
Syntrophomonas zehnderi, OL-4 Szehn Szehn_0252623-149
Ga0124040_1367:Szehn_020826-281
Szehn_0267512-145
Ga0124040_15213:Szehn_026769-298
Ga0124040_14626:Szehn_024679-299
Mucilaginibacter gossypii, cycad 4 PaGL#42_0004588-300
PaGL#42_00899154-254
PaGL#42_00972157-257
PaGL#42_0119337-258
PaGL#42_0287035-310
PaGL#42_04317138-240

PF05569:Peptidase_M56. BlaR1 peptidase M56

Found 74 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516157.1:LOMAGDGF_007146-280
WP_003511676.1:LOMAGDGF_007326-289
WP_003512663.1:LOMAGDGF_019018-262
WP_235825054.1:LOMAGDGF_023136-66
WP_003517312.1:LOMAGDGF_024308-311
WP_003515817.1:LOMAGDGF_025557-319
Clostridium acetobutylicum, DSM 1731 WP_010966707.1:FHOCHPCF_034919-307
Acetivibrio alkalicellulosi, DSM 17461 2510061059:NJMEOJLD_012917-310
2510063025:NJMEOJLD_032119-317
2510063038:NJMEOJLD_032247-290
2510063431:NJMEOJLD_036107-308
2510064010:NJMEOJLD_041818-264
Pseudobacteroides cellulosolvens, DSM 2933 WP_036936527.1:NEIHKHHH_0397812-318
WP_050753778.1:NEIHKHHH_049488-314
WP_050753842.1:NEIHKHHH_052757-92
106-339
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_0044329-220
Paenibacillus guangzhouensis, KCTC 33171 WP_152393206.1:KDFAKKPF_0181217-339
WP_152395924.1:KDFAKKPF_0503675-229
Clostridium acetobutylicum, ATCC 824 WP_010966707.1:OJAMHIDJ_035039-307
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0203414-325
FD_YE_37_3, AnGL26 AnGL26_00106167-259
FD_YE_37_8_2, AnGL3 AnGL3_03271157-236
AnGL3_03272144-215
FD_YE_37_9_2, AnGL4 AnGL4_021248-280
AnGL4_0265610-304
Syntrophomonas curvata, Scurva Scurva_006007-306
Scurva_022096-281
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0153813-325
Syntrophomonas wolfei methylbutyratica, Swm Swm_0032844-192
Swm_004672-293
Swm_0175513-333
Swm_018056-297
Swm_0219819-170
Swm_027036-314
Terrisporobacter hibernicus, AnGL54 AnGL54_013268-98
118-354
AnGL54_023127-322
Sunxiuqinia elliptica, AnGL22 AnGL22_00106167-259
Paraclostridium benzoelyticum, AnGL27 AnGL27_015114-173
AnGL27_023148-282
FD-YE-37-9-3, AnGL29 AnGL29_028498-280
AnGL29_0338110-304
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00036144-240
PaGL#35_02846143-258
PaGL#35_05062155-253
PaGL#35_0603625-300
Syntrophomonas erecta, GB-438 Ga0610585_0203414-325
Priestia megaterium, 10L1 PaGL#57_0429561-246
Syntrophomonas wolfei, saponavida Swsap_007034-280
Swsap_007147-278
Swsap_016427-289
Swsap_031816-303
Peribacillus frigoritolerans, 30N-5 PaGL#67_0115411-304
PaGL#67_0302958-246
Sphingomonas sp., CR2A3 PaGL#62_0309486-281
PaGL#62_035825-275
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_020548-98
118-354
AnGL54_031157-322
Niallia taxi, AG-1 PaGL#37_051267-312
PaGL#37_0171062-242
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_0044329-220
Syntrophomonas zehnderi, OL-4 Szehn Szehn_0252623-149
Ga0124040_1367:Szehn_020826-281
Szehn_0267512-145
Ga0124040_15213:Szehn_026769-298
Ga0124040_14626:Szehn_024679-299
Mucilaginibacter gossypii, cycad 4 PaGL#42_0004588-300
PaGL#42_00899154-254
PaGL#42_00972157-257
PaGL#42_0119337-258
PaGL#42_0287035-310
PaGL#42_04317138-240
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