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Spalm_02015 Locus tags: • Sequence Length: 486

Syntrophomonas palmitatica, JCM14374 Spalm Gs0110775

5050100100150150200200250250300300350350400400450450500500
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Spalm_01583 Spalm_02493 Spalm_01310 Spalm_02338 Spalm_02550 Spalm_02015 Spalm_02405 Spalm_00899 Spalm_00309 Spalm_02102 Spalm_01705
    [PF02900]_[PF01871]

    [5:PF02900]_[300:PF01871]

    [5:IPR004183]_[292:IPR036071]_[294:IPR002733]_[300:IPR002733]
    

Looking for similar signatures in the working genomes

PF02900:LigB. Catalytic LigB subunit of aromatic ring-opening dioxygenase

Found 49 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003519144.1:LOMAGDGF_011327-268
Clostridium acetobutylicum, DSM 1731 WP_010964169.1:FHOCHPCF_0089820-248
WP_010964729.1:FHOCHPCF_014725-267
Acetivibrio alkalicellulosi, DSM 17461 2510062126:NJMEOJLD_023287-268
Pseudobacteroides cellulosolvens, DSM 2933 WP_242853073.1:NEIHKHHH_035887-268
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112455:GJLLLGJL_024094-264
Paenibacillus guangzhouensis, KCTC 33171 WP_152394916.1:KDFAKKPF_037953-248
Clostridium acetobutylicum, ATCC 824 WP_010964169.1:OJAMHIDJ_0090120-248
WP_010964729.1:OJAMHIDJ_014765-267
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696574.1:PROKKA_014110-258
Syntrophomonas erecta, DSM 16215 OINOEOOJ_024244-265
FD_25_22, AnGL7 AnGL7_020067-245
FD_YE_37_3, AnGL26 AnGL26_0165535-246
FD_YE_37_9_2, AnGL4 AnGL4_001937-271
AnGL4_0108728-256
Syntrophomonas curvata, Scurva Scurva_027634-267
Syntrophomonas erecta sporosyntropha, Sespor Sespor_010934-265
Syntrophomonas wolfei methylbutyratica, Swm Swm_027924-264
Terrisporobacter hibernicus, AnGL54 AnGL54_039047-268
Sunxiuqinia elliptica, AnGL22 AnGL22_0165235-246
FD-YE-37-9-3, AnGL29 AnGL29_009187-271
AnGL29_0181228-256
Syntrophomonas erecta, GB-438 Ga0610585_024244-265
Variovorax sp., EBFNA2 PaGL#33_002988-254
PaGL#33_0100753-302
PaGL#33_0250312-271
Variovorax paradoxus, 2u118 PaGL#32_002946-280
PaGL#32_056916-309
PaGL#32_0104859-307
PaGL#32_064306-269
PaGL#32_0331524-271
Dietzia cinnamea, 55 PaGL#56_0057423-239
Clostridium subterminale, CB-LS10-1 AnGL53_0277119-249
Variovorax paradoxus, SPNA7 PaGL#43_056816-309
PaGL#43_002616-280
PaGL#43_0104567-315
PaGL#43_0336612-271
Methanospirillum lacunae, Ki8-1 MLKi8_0019826-259
Geodermatophilus sp., RDM14 PaGL#36_0054624-256
PaGL#36_0165846-273
Syntrophomonas wolfei, saponavida Swsap_009294-267
Peribacillus frigoritolerans, 30N-5 PaGL#67_027073-249
Micromonospora inositola, Utrum1 PaGL#61_0455228-262
Sphingomonas sp., CR2A3 PaGL#62_005669-272
PaGL#62_006614-249
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_007337-268
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11416:Spalm_020155-264
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112455:Swol_024094-264
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_11887:Szehn_010345-265

PF01871:AMMECR1. AMMECR1

Found 38 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003519144.1:LOMAGDGF_01132298-458
Clostridium acetobutylicum, DSM 1731 WP_010964729.1:FHOCHPCF_01472301-465
Acetivibrio alkalicellulosi, DSM 17461 2510062126:NJMEOJLD_02328295-455
Pseudobacteroides cellulosolvens, DSM 2933 WP_242853074.1:NEIHKHHH_0358918-179
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112455:GJLLLGJL_02409300-462
Clostridium acetobutylicum, ATCC 824 WP_010964729.1:OJAMHIDJ_01476301-465
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696574.1:PROKKA_01411292-454
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02424301-462
FD_25_22, AnGL7 AnGL7_0242819-186
FD_MS_7_1, AnGL28 AnGL28_03182303-468
FD_SO4_37_1, AnGL2 AnGL2_02312303-468
FD_YE_25_21, AnGL21 AnGL21_0341518-188
FD_YE_37_8_2, AnGL3 AnGL3_01376301-465
FD_YE_37_9_2, AnGL4 AnGL4_00193291-457
Syntrophus buswellii, Sbus Sbus_0045412-181
Syntrophomonas curvata, Scurva Scurva_02763301-463
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01093301-462
Syntrophomonas wolfei methylbutyratica, Swm Swm_02792300-461
Terrisporobacter hibernicus, AnGL54 AnGL54_03904302-464
FD-25-21, AnGL21 AnGL21_0024121-186
FD-MS-7-8, AnGL9 AnGL9_02990304-469
FD-YE-37-9-3, AnGL29 AnGL29_00918291-457
Syntrophomonas erecta, GB-438 Ga0610585_02424301-462
Maridesulfovibrio salexigens, AnGL23 AnGL23_0300119-184
Methanospirillum lacunae, Ki8-1 MLKi8_0256713-183
Methanospirillum hungatei, GP1 MhGP1_0285514-183
Methanospirillum stamsii, Pt1 MLKi8_0345813-183
Syntrophomonas wolfei, saponavida Swsap_00929302-464
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00733302-464
Methanospirillum.hungatei GP1, MhGP1 8064046672:MhGP1_0004814-183
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112046:Mhun_0204513-183
MPOB, Sfum 639702068:Sfum_0134321-187
639702762:Sfum_02055357-523
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11416:Spalm_02015300-462
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112455:Swol_02409300-462
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_11887:Szehn_01034301-462
Syntrophus aciditrophicus, SB 637858588:SYN_0026412-181
Syntrophus gentianae, DSM8423 Ga0074853_10293:Sgen_0030412-181
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