SMPP Home

Spalm_01463 Locus tags: • Sequence Length: 166

Syntrophomonas palmitatica, JCM14374 Spalm Gs0110775

5050100100150150200200
Show complete sequence
Click domain (colored bar) to show sequence
Spalm_01729 Spalm_02427 Spalm_02041 Spalm_00332 Spalm_01825 Spalm_01463 Spalm_01059 Spalm_02277 Spalm_00745 Spalm_02201 Spalm_02124 
    [PF03449]_[PF01272]

    [6:PF03449]_[84:PF01272]

    [4:IPR036805]_[6:IPR022691]_[84:IPR001437]

Looking for similar signatures in the working genomes

PF03449:GreA_GreB_N. Transcription elongation factor, N-terminal

Found 76 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514606.1:LOMAGDGF_004517-77
Clostridium acetobutylicum, DSM 1731 WP_010965267.1:FHOCHPCF_020123-73
WP_010965725.1:FHOCHPCF_024674-74
WP_010966474.1:FHOCHPCF_032487-77
Acetivibrio alkalicellulosi, DSM 17461 2510061225:NJMEOJLD_014536-76
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945667.1:NEIHKHHH_024486-76
Ruminococcus albus_7, DSM 20455 WP_013497789.1:HCIAFFOI_011286-75
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11128:GJLLLGJL_001247-76
Paenibacillus guangzhouensis, KCTC 33171 WP_152395741.1:KDFAKKPF_048175-76
WP_152396054.1:KDFAKKPF_051835-76
Clostridium acetobutylicum, ATCC 824 WP_010965267.1:OJAMHIDJ_020203-73
WP_010965725.1:OJAMHIDJ_024774-74
WP_010966474.1:OJAMHIDJ_032577-77
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697637.1:PROKKA_007036-76
WP_137697997.1:PROKKA_007583-73
Syntrophomonas erecta, DSM 16215 OINOEOOJ_020907-76
FD_25_22, AnGL7 AnGL7_006724-74
AnGL7_028474-74
FD_25_27, AnGL8 AnGL8_011914-74
AnGL8_016173-73
FD_MS_7_1, AnGL28 AnGL28_01503549-613
FD_SO4_25_1_F22, AnGL30 AnGL30_014370-69
FD_SO4_37_1, AnGL2 AnGL2_00632549-613
FD_YE_25_21, AnGL21 AnGL21_025533-73
AnGL21_029624-74
FD_YE_37_3, AnGL26 AnGL26_013705-75
FD_YE_37_8_2, AnGL3 AnGL3_016625-75
FD_YE_37_9_2, AnGL4 AnGL4_009356-76
Syntrophus buswellii, Sbus Sbus_005894-72
Syntrophomonas curvata, Scurva Scurva_002086-75
Syntrophomonas erecta sporosyntropha, Sespor Sespor_014827-76
Syntrophomonas wolfei methylbutyratica, Swm Swm_001247-76
Terrisporobacter hibernicus, AnGL54 AnGL54_030836-76
FD-25-21, AnGL21 AnGL21_019274-74
AnGL21_033764-74
Sunxiuqinia elliptica, AnGL22 AnGL22_013725-75
Paraclostridium benzoelyticum, AnGL27 AnGL27_0050319-90
FD-MS-7-8, AnGL9 AnGL9_01426547-611
FD-YE-37-9-3, AnGL29 AnGL29_016606-76
Methylobacterium radiotolerans, GTSA1 PaGL#34_0073524-95
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_007685-74
Syntrophomonas erecta, GB-438 Ga0610585_020907-76
Variovorax sp., EBFNA2 PaGL#33_028583-74
PaGL#33_0502632-103
Variovorax paradoxus, 2u118 PaGL#32_029613-74
PaGL#32_0437130-101
Dietzia cinnamea, 55 PaGL#56_020708-77
Maridesulfovibrio salexigens, AnGL23 AnGL23_038243-72
Exiguobacterium mexicanum, AnGL24 AnGL24_010796-76
AnGL24_013644-74
Clostridium subterminale, CB-LS10-1 AnGL53_032032-73
AnGL53_0340628-98
Priestia megaterium, 10L1 PaGL#57_014056-75
PaGL#57_029497-77
Variovorax paradoxus, SPNA7 PaGL#43_030133-74
PaGL#43_0453630-101
Geodermatophilus sp., RDM14 PaGL#36_0085611-81
Methylorubrum populi, CTY4 PaGL#39_009096-76
Fictibacillus phosphorivorans, TY7 PaGL#38_033767-77
Syntrophomonas wolfei, saponavida Swsap_012977-76
Bacillus subtilis, 30VD-1 PaGL#66_016137-77
Peribacillus frigoritolerans, 30N-5 PaGL#67_021077-77
Micromonospora inositola, Utrum1 PaGL#61_0114611-80
Sphingomonas sp., CR2A3 PaGL#62_006524-75
PaGL#62_008507-76
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_038866-76
Niallia taxi, AG-1 PaGL#37_027827-77
MPOB, Sfum 639700981:Sfum_002402-73
639702856:Sfum_021503-74
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10942:Spalm_014636-76
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11128:Swol_001247-76
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_10568:Szehn_004808-78
Syntrophus aciditrophicus, SB 637858945:SYN_005974-72
Syntrophus gentianae, DSM8423 Ga0074853_10930:Sgen_014583-71
Mucilaginibacter gossypii, cycad 4 PaGL#42_054255-74
Ruminococcus callidus, ATCC 27760 Rcal_008694-74

PF01272:GreA_GreB. Transcription elongation factor, GreA/GreB, C-term

Found 106 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514606.1:LOMAGDGF_0045183-158
WP_003514852.1:LOMAGDGF_0059772-146
Clostridium acetobutylicum, DSM 1731 WP_010965267.1:FHOCHPCF_0201279-157
WP_010965725.1:FHOCHPCF_0246781-153
WP_010966474.1:FHOCHPCF_0324883-158
Acetivibrio alkalicellulosi, DSM 17461 2510061225:NJMEOJLD_0145383-157
2510063593:NJMEOJLD_0377172-146
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945667.1:NEIHKHHH_0244883-157
WP_050753668.1:NEIHKHHH_0423481-154
Ruminococcus albus_7, DSM 20455 WP_013497789.1:HCIAFFOI_0112883-156
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11128:GJLLLGJL_0012484-158
Paenibacillus guangzhouensis, KCTC 33171 WP_152395741.1:KDFAKKPF_0481784-157
WP_152396054.1:KDFAKKPF_0518383-157
Clostridium acetobutylicum, ATCC 824 WP_010965267.1:OJAMHIDJ_0202079-157
WP_010965725.1:OJAMHIDJ_0247781-153
WP_010966474.1:OJAMHIDJ_0325783-158
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697637.1:PROKKA_0070383-157
WP_137697997.1:PROKKA_0075881-153
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0076772-147
OINOEOOJ_0209084-158
FD_25_22, AnGL7 AnGL7_0067280-155
AnGL7_0284782-157
FD_25_27, AnGL8 AnGL8_0119180-159
AnGL8_0161780-156
FD_MS_7_1, AnGL28 AnGL28_01503621-685
AnGL28_0328753-127
AnGL28_03289121-194
FD_SO4_25_1_F22, AnGL30 AnGL30_0143776-150
FD_SO4_37_1, AnGL2 AnGL2_00632621-685
AnGL2_0241753-127
AnGL2_02419121-194
FD_YE_25_21, AnGL21 AnGL21_0255381-156
AnGL21_0296280-156
FD_YE_37_3, AnGL26 AnGL26_0076252-127
AnGL26_0076447-121
AnGL26_0137083-156
FD_YE_37_8_2, AnGL3 AnGL3_0166283-156
FD_YE_37_9_2, AnGL4 AnGL4_0093585-158
Syntrophus buswellii, Sbus Sbus_0058980-154
Sbus_0173152-126
Syntrophomonas curvata, Scurva Scurva_0020884-158
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0024572-147
Sespor_0148284-158
Syntrophomonas wolfei methylbutyratica, Swm Swm_0012484-158
Terrisporobacter hibernicus, AnGL54 AnGL54_0308384-157
FD-25-21, AnGL21 AnGL21_0192780-155
AnGL21_0337682-157
Sunxiuqinia elliptica, AnGL22 AnGL22_0076352-127
AnGL22_0076547-121
AnGL22_0137283-156
Paraclostridium benzoelyticum, AnGL27 AnGL27_0050120-93
AnGL27_0050398-171
FD-MS-7-8, AnGL9 AnGL9_0023653-127
AnGL9_01426619-683
FD-YE-37-9-3, AnGL29 AnGL29_0166085-158
Methylobacterium radiotolerans, GTSA1 PaGL#34_00735102-177
PaGL#34_0416284-156
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0076884-156
Syntrophomonas erecta, GB-438 Ga0610585_0076772-147
Ga0610585_0209084-158
Variovorax sp., EBFNA2 PaGL#33_0074684-159
PaGL#33_0285882-157
PaGL#33_0337946-121
PaGL#33_05026112-185
Variovorax paradoxus, 2u118 PaGL#32_0536447-121
PaGL#32_0296182-157
PaGL#32_04371109-183
Dietzia cinnamea, 55 PaGL#56_0207084-161
Maridesulfovibrio salexigens, AnGL23 AnGL23_0382481-153
Exiguobacterium mexicanum, AnGL24 AnGL24_0107983-157
AnGL24_0136479-154
Clostridium subterminale, CB-LS10-1 AnGL53_0320379-151
AnGL53_03406104-179
Priestia megaterium, 10L1 PaGL#57_0140580-152
PaGL#57_0294985-158
Variovorax paradoxus, SPNA7 PaGL#43_0650347-121
PaGL#43_0301382-157
PaGL#43_04536109-183
Geodermatophilus sp., RDM14 PaGL#36_0085688-163
Methylorubrum populi, CTY4 PaGL#39_0090984-157
PaGL#39_0348827-102
PaGL#39_0372585-153
Fictibacillus phosphorivorans, TY7 PaGL#38_0047060-135
PaGL#38_0337683-158
Syntrophomonas wolfei, saponavida Swsap_0085472-145
Swsap_0129784-158
Bacillus subtilis, 30VD-1 PaGL#66_0161384-157
Peribacillus frigoritolerans, 30N-5 PaGL#67_0210784-157
Micromonospora inositola, Utrum1 PaGL#61_0114684-162
Sphingomonas sp., CR2A3 PaGL#62_0065284-157
PaGL#62_0085083-156
PaGL#62_0198882-151
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0388684-157
Niallia taxi, AG-1 PaGL#37_0278284-158
MPOB, Sfum 639700981:Sfum_0024082-154
639702856:Sfum_0215081-155
639703205:Sfum_0250855-131
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10942:Spalm_0146384-158
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11128:Swol_0012484-158
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_10568:Szehn_0048086-160
Syntrophus aciditrophicus, SB 637858945:SYN_0059780-154
637859920:SYN_0150747-124
Syntrophus gentianae, DSM8423 Ga0074853_10930:Sgen_0145880-154
Ga0074853_11247:Sgen_0181152-127
Mucilaginibacter gossypii, cycad 4 PaGL#42_0542584-156
Ruminococcus callidus, ATCC 27760 Rcal_0086981-154
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA