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Spalm_00408 Locus tags: • Sequence Length: 281

Syntrophomonas palmitatica, JCM14374 Spalm Gs0110775

5050100100150150200200250250300300
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Spalm_00407 Spalm_01126 Spalm_00122 unknown Spalm_01264 Spalm_00408 Spalm_00623 Spalm_01265 Spalm_00985 Spalm_00809 Spalm_01537 
    [PF02601]_[PF02601]

    [1:PF02601]_[195:PF02601]

    [1:IPR020579]_[195:IPR020579]

Looking for similar signatures in the working genomes

PF02601:Exonuc_VII_L. Exonuclease VII, large subunit

Found 83 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518755.1:LOMAGDGF_01435130-346
Clostridium acetobutylicum, DSM 1731 WP_013913670.1:FHOCHPCF_02122123-342
325-393
Acetivibrio alkalicellulosi, DSM 17461 2510064173:NJMEOJLD_04342139-354
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946926.1:NEIHKHHH_02051122-338
328-393
Ruminococcus albus_7, DSM 20455 WP_013498622.1:HCIAFFOI_02028124-329
320-391
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11590:GJLLLGJL_00578123-340
Paenibacillus guangzhouensis, KCTC 33171 WP_152394053.1:KDFAKKPF_02785124-440
Clostridium acetobutylicum, ATCC 824 WP_010965382.1:OJAMHIDJ_02130123-342
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695847.1:PROKKA_02219122-325
321-392
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01331124-342
332-393
FD_25_22, AnGL7 AnGL7_03022125-440
FD_25_27, AnGL8 AnGL8_02773121-436
FD_MS_7_1, AnGL28 AnGL28_00702123-436
FD_SO4_25_1_F22, AnGL30 AnGL30_00662137-450
FD_SO4_37_1, AnGL2 AnGL2_03381123-436
FD_YE_25_21, AnGL21 AnGL21_00608142-457
AnGL21_01660147-411
392-569
FD_YE_37_3, AnGL26 AnGL26_02833138-474
FD_YE_37_8_2, AnGL3 AnGL3_02907138-452
FD_YE_37_9_2, AnGL4 AnGL4_00093122-338
Syntrophus buswellii, Sbus Sbus_01381132-445
Syntrophomonas curvata, Scurva Scurva_01037123-337
Syntrophomonas erecta sporosyntropha, Sespor Sespor_02307124-342
332-393
Syntrophomonas wolfei methylbutyratica, Swm Swm_00615123-340
Terrisporobacter hibernicus, AnGL54 AnGL54_02115122-322
309-391
FD-25-21, AnGL21 AnGL21_03207125-440
Sunxiuqinia elliptica, AnGL22 AnGL22_02830138-474
Paraclostridium benzoelyticum, AnGL27 AnGL27_03203122-338
323-391
FD-MS-7-8, AnGL9 AnGL9_00193123-436
FD-YE-37-9-3, AnGL29 AnGL29_00818122-338
Methylobacterium radiotolerans, GTSA1 PaGL#34_00838146-515
PaGL#34_02345122-286
Syntrophomonas erecta, GB-438 Ga0610585_01331124-342
332-393
Variovorax sp., EBFNA2 PaGL#33_02883130-421
Variovorax paradoxus, 2u118 PaGL#32_00242205-568
PaGL#32_0268781-444
PaGL#32_02936114-405
Dietzia cinnamea, 55 PaGL#56_00556148-364
PaGL#56_02035133-329
Maridesulfovibrio salexigens, AnGL23 AnGL23_02506138-454
Exiguobacterium mexicanum, AnGL24 AnGL24_01837122-432
Clostridium subterminale, CB-LS10-1 AnGL53_01461123-346
Priestia megaterium, 10L1 PaGL#57_03092124-438
Variovorax paradoxus, SPNA7 PaGL#43_02988114-404
Methanospirillum lacunae, Ki8-1 MLKi8_00574138-453
Geodermatophilus sp., RDM14 PaGL#36_00932128-350
330-397
Methylorubrum populi, CTY4 PaGL#39_00189147-347
PaGL#39_03570144-345
PaGL#39_03719183-499
Fictibacillus phosphorivorans, TY7 PaGL#38_02941124-440
Methanospirillum hungatei, GP1 MhGP1_01192146-461
Methanospirillum stamsii, Pt1 MLKi8_01391138-453
Syntrophomonas wolfei, saponavida Swsap_00402123-343
Bacillus subtilis, 30VD-1 PaGL#66_01861124-438
Peribacillus frigoritolerans, 30N-5 PaGL#67_02263124-439
Micromonospora inositola, Utrum1 PaGL#61_01066130-340
335-400
Sphingomonas sp., CR2A3 PaGL#62_02257140-437
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_02918122-322
309-391
Niallia taxi, AG-1 PaGL#37_02626123-440
Methanospirillum.hungatei GP1, MhGP1 8064048376:MhGP1_01710146-461
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11579:Mhun_00579146-461
MPOB, Sfum 639702183:Sfum_01461152-469
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_004081-204
195-255
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11590:Swol_00578123-340
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12646:Szehn_01282123-340
Syntrophus aciditrophicus, SB 637860125:SYN_01702132-446
Syntrophus gentianae, DSM8423 Ga0074853_10866:Sgen_01373133-447
Ruminococcus callidus, ATCC 27760 Rcal_00650122-339
330-390

PF02601:Exonuc_VII_L. Exonuclease VII, large subunit

Found 83 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518755.1:LOMAGDGF_01435130-346
Clostridium acetobutylicum, DSM 1731 WP_013913670.1:FHOCHPCF_02122123-342
325-393
Acetivibrio alkalicellulosi, DSM 17461 2510064173:NJMEOJLD_04342139-354
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946926.1:NEIHKHHH_02051122-338
328-393
Ruminococcus albus_7, DSM 20455 WP_013498622.1:HCIAFFOI_02028124-329
320-391
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11590:GJLLLGJL_00578123-340
Paenibacillus guangzhouensis, KCTC 33171 WP_152394053.1:KDFAKKPF_02785124-440
Clostridium acetobutylicum, ATCC 824 WP_010965382.1:OJAMHIDJ_02130123-342
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695847.1:PROKKA_02219122-325
321-392
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01331124-342
332-393
FD_25_22, AnGL7 AnGL7_03022125-440
FD_25_27, AnGL8 AnGL8_02773121-436
FD_MS_7_1, AnGL28 AnGL28_00702123-436
FD_SO4_25_1_F22, AnGL30 AnGL30_00662137-450
FD_SO4_37_1, AnGL2 AnGL2_03381123-436
FD_YE_25_21, AnGL21 AnGL21_00608142-457
AnGL21_01660147-411
392-569
FD_YE_37_3, AnGL26 AnGL26_02833138-474
FD_YE_37_8_2, AnGL3 AnGL3_02907138-452
FD_YE_37_9_2, AnGL4 AnGL4_00093122-338
Syntrophus buswellii, Sbus Sbus_01381132-445
Syntrophomonas curvata, Scurva Scurva_01037123-337
Syntrophomonas erecta sporosyntropha, Sespor Sespor_02307124-342
332-393
Syntrophomonas wolfei methylbutyratica, Swm Swm_00615123-340
Terrisporobacter hibernicus, AnGL54 AnGL54_02115122-322
309-391
FD-25-21, AnGL21 AnGL21_03207125-440
Sunxiuqinia elliptica, AnGL22 AnGL22_02830138-474
Paraclostridium benzoelyticum, AnGL27 AnGL27_03203122-338
323-391
FD-MS-7-8, AnGL9 AnGL9_00193123-436
FD-YE-37-9-3, AnGL29 AnGL29_00818122-338
Methylobacterium radiotolerans, GTSA1 PaGL#34_00838146-515
PaGL#34_02345122-286
Syntrophomonas erecta, GB-438 Ga0610585_01331124-342
332-393
Variovorax sp., EBFNA2 PaGL#33_02883130-421
Variovorax paradoxus, 2u118 PaGL#32_00242205-568
PaGL#32_0268781-444
PaGL#32_02936114-405
Dietzia cinnamea, 55 PaGL#56_00556148-364
PaGL#56_02035133-329
Maridesulfovibrio salexigens, AnGL23 AnGL23_02506138-454
Exiguobacterium mexicanum, AnGL24 AnGL24_01837122-432
Clostridium subterminale, CB-LS10-1 AnGL53_01461123-346
Priestia megaterium, 10L1 PaGL#57_03092124-438
Variovorax paradoxus, SPNA7 PaGL#43_02988114-404
Methanospirillum lacunae, Ki8-1 MLKi8_00574138-453
Geodermatophilus sp., RDM14 PaGL#36_00932128-350
330-397
Methylorubrum populi, CTY4 PaGL#39_00189147-347
PaGL#39_03570144-345
PaGL#39_03719183-499
Fictibacillus phosphorivorans, TY7 PaGL#38_02941124-440
Methanospirillum hungatei, GP1 MhGP1_01192146-461
Methanospirillum stamsii, Pt1 MLKi8_01391138-453
Syntrophomonas wolfei, saponavida Swsap_00402123-343
Bacillus subtilis, 30VD-1 PaGL#66_01861124-438
Peribacillus frigoritolerans, 30N-5 PaGL#67_02263124-439
Micromonospora inositola, Utrum1 PaGL#61_01066130-340
335-400
Sphingomonas sp., CR2A3 PaGL#62_02257140-437
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_02918122-322
309-391
Niallia taxi, AG-1 PaGL#37_02626123-440
Methanospirillum.hungatei GP1, MhGP1 8064048376:MhGP1_01710146-461
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11579:Mhun_00579146-461
MPOB, Sfum 639702183:Sfum_01461152-469
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_004081-204
195-255
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11590:Swol_00578123-340
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12646:Szehn_01282123-340
Syntrophus aciditrophicus, SB 637860125:SYN_01702132-446
Syntrophus gentianae, DSM8423 Ga0074853_10866:Sgen_01373133-447
Ruminococcus callidus, ATCC 27760 Rcal_00650122-339
330-390
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