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Spalm_00645 Locus tags: • Sequence Length: 287

Syntrophomonas palmitatica, JCM14374 Spalm Gs0110775

5050100100150150200200250250300300
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Spalm_00159 Spalm_00845 Spalm_00160 Spalm_00437 Spalm_00161 Spalm_00645 Spalm_00438 Spalm_00439 Spalm_00646 Spalm_00162 
    [PF07733]_[PF17657]

    [0:PF07733]_[124:PF17657]

    [0:IPR011708]_[124:IPR040982]

Looking for similar signatures in the working genomes

PF07733:DNA_pol3_alpha. Bacterial DNA polymerase III alpha NTPase domain

Found 137 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517492.1:LOMAGDGF_01030296-555
WP_003515548.1:LOMAGDGF_01263828-1012
1020-1098
Clostridium acetobutylicum, DSM 1731 FHOCHPCF_00561298-555
WP_010964536.1:FHOCHPCF_01279297-575
WP_010966712.1:FHOCHPCF_03496831-1021
1030-1100
Acetivibrio alkalicellulosi, DSM 17461 2510063752:NJMEOJLD_03929316-575
2510063817:NJMEOJLD_03992816-1003
1008-1086
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943992.1:NEIHKHHH_00555295-553
WP_036935050.1:NEIHKHHH_05036832-1100
Ruminococcus albus_7, DSM 20455 WP_013483299.1:HCIAFFOI_03388449-733
WP_013498767.1:HCIAFFOI_02187894-1074
1077-1151
WP_013499640.1:HCIAFFOI_03155294-548
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11933:GJLLLGJL_00917599-786
788-868
Ga0065332_112186:GJLLLGJL_02141297-554
Paenibacillus guangzhouensis, KCTC 33171 WP_152392508.1:KDFAKKPF_01017822-1094
WP_152394653.1:KDFAKKPF_03490296-562
Clostridium acetobutylicum, ATCC 824 OJAMHIDJ_00562298-555
WP_010964536.1:OJAMHIDJ_01282297-575
WP_010966712.1:OJAMHIDJ_03508831-1021
1030-1100
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698317.1:PROKKA_02598295-553
WP_137698928.1:PROKKA_03598828-1096
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01047591-778
783-861
OINOEOOJ_012490-221
OINOEOOJ_01817296-553
FD_25_22, AnGL7 AnGL7_03032303-569
FD_25_27, AnGL8 AnGL8_01803290-557
FD_MS_7_1, AnGL28 AnGL28_00042301-568
FD_SO4_25_1_F22, AnGL30 AnGL30_01781361-627
FD_SO4_37_1, AnGL2 AnGL2_02721301-568
FD_YE_25_21, AnGL21 AnGL21_00727291-558
AnGL21_00948274-529
FD_YE_37_3, AnGL26 AnGL26_02254341-603
AnGL26_03896278-533
FD_YE_37_8_2, AnGL3 AnGL3_01858344-648
AnGL3_03159246-482
FD_YE_37_9_2, AnGL4 AnGL4_02404296-553
AnGL4_03194823-1097
Syntrophus buswellii, Sbus Sbus_01539300-564
Syntrophomonas curvata, Scurva Scurva_00579297-554
Scurva_01295595-864
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01820296-553
Sespor_023910-221
Sespor_02601591-778
783-861
Syntrophomonas wolfei methylbutyratica, Swm Swm_01008600-869
Swm_02552297-554
Terrisporobacter hibernicus, AnGL54 AnGL54_02000815-1001
1009-1087
AnGL54_03466296-553
FD-25-21, AnGL21 AnGL21_03197306-569
Sunxiuqinia elliptica, AnGL22 AnGL22_02251341-603
AnGL22_03892278-533
Paraclostridium benzoelyticum, AnGL27 AnGL27_00924296-553
AnGL27_01553817-1004
1014-1089
FD-MS-7-8, AnGL9 AnGL9_00671301-568
FD-YE-37-9-3, AnGL29 AnGL29_00452823-1097
AnGL29_03129296-553
Methylobacterium radiotolerans, GTSA1 PaGL#34_02233282-538
PaGL#34_02253323-590
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_02068317-576
PaGL#35_03963275-530
Syntrophomonas erecta, GB-438 Ga0610585_01047591-778
783-861
Ga0610585_012490-221
Ga0610585_01817296-553
Variovorax sp., EBFNA2 PaGL#33_02509331-589
PaGL#33_02645301-578
Variovorax paradoxus, 2u118 PaGL#32_03212302-578
PaGL#32_03298331-589
Dietzia cinnamea, 55 PaGL#56_00879350-599
PaGL#56_01275314-585
Maridesulfovibrio salexigens, AnGL23 AnGL23_03756299-572
Exiguobacterium mexicanum, AnGL24 AnGL24_01305813-1083
AnGL24_01989256-503
Clostridium subterminale, CB-LS10-1 AnGL53_01161831-1100
AnGL53_03132294-572
Priestia megaterium, 10L1 PaGL#57_01087680-964
996-1094
PaGL#57_02773283-540
PaGL#57_01380305-572
PaGL#57_03393823-1093
Variovorax paradoxus, SPNA7 PaGL#43_03265302-578
PaGL#43_03349330-588
Geodermatophilus sp., RDM14 PaGL#36_01920346-608
PaGL#36_01966324-593
Methylorubrum populi, CTY4 PaGL#39_00880327-591
PaGL#39_04476275-530
Fictibacillus phosphorivorans, TY7 PaGL#38_02317820-1003
1017-1090
PaGL#38_03548291-549
Syntrophomonas wolfei, saponavida Swsap_00103595-778
784-864
Swsap_00748296-553
Bacillus subtilis, 30VD-1 PaGL#66_01416281-538
PaGL#66_02472841-1024
1040-1111
Peribacillus frigoritolerans, 30N-5 PaGL#67_01850282-539
PaGL#67_03942827-1097
Micromonospora inositola, Utrum1 PaGL#61_02405314-583
PaGL#61_05348368-614
Sphingomonas sp., CR2A3 PaGL#62_00705292-559
PaGL#62_02849284-538
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00296296-553
AnGL54_02803815-1001
1009-1087
Niallia taxi, AG-1 PaGL#37_01446827-1010
1020-1097
PaGL#37_02970284-542
MPOB, Sfum 639701692:Sfum_00964253-504
639701992:Sfum_01269304-571
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_01156173-358
362-443
Spalm_02493280-536
Ga0128340_103119:Spalm_00644297-426
Ga0128340_103120:Spalm_006450-122
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11933:Swol_00917599-786
788-868
Ga0065332_112186:Swol_02141297-554
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_15357:Szehn_02755297-554
Ga0124040_127108:Szehn_01569603-787
792-873
Syntrophus aciditrophicus, SB 637859951:SYN_01536299-564
Syntrophus gentianae, DSM8423 Ga0074853_11095:Sgen_01637299-564
Mucilaginibacter gossypii, cycad 4 PaGL#42_00123317-576
PaGL#42_01316276-531
PaGL#42_05033274-529
Ruminococcus callidus, ATCC 27760 Rcal_00739302-558
Rcal_01184830-1020
1028-1099

PF17657:DNA_pol3_finger. Bacterial DNA polymerase III alpha subunit finger domain

Found 115 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517492.1:LOMAGDGF_01030557-718
WP_003515548.1:LOMAGDGF_012631101-1242
Clostridium acetobutylicum, DSM 1731 FHOCHPCF_00561557-720
WP_010964536.1:FHOCHPCF_01279577-738
WP_010966712.1:FHOCHPCF_034961103-1257
Acetivibrio alkalicellulosi, DSM 17461 2510063752:NJMEOJLD_03929577-739
2510063817:NJMEOJLD_039921089-1235
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943992.1:NEIHKHHH_00555555-717
WP_036935050.1:NEIHKHHH_050361103-1244
Ruminococcus albus_7, DSM 20455 WP_013483299.1:HCIAFFOI_03388735-895
WP_013498767.1:HCIAFFOI_021871164-1301
WP_013499640.1:HCIAFFOI_03155550-708
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11933:GJLLLGJL_00917872-1008
Ga0065332_112186:GJLLLGJL_02141556-722
Paenibacillus guangzhouensis, KCTC 33171 WP_152392508.1:KDFAKKPF_010171097-1236
WP_152394653.1:KDFAKKPF_03490564-726
Clostridium acetobutylicum, ATCC 824 OJAMHIDJ_00562557-720
WP_010964536.1:OJAMHIDJ_01282577-738
WP_010966712.1:OJAMHIDJ_035081103-1257
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698317.1:PROKKA_02598555-717
WP_137698928.1:PROKKA_035981099-1237
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01047864-1001
OINOEOOJ_01249224-390
OINOEOOJ_01817555-721
FD_25_22, AnGL7 AnGL7_03032571-746
FD_25_27, AnGL8 AnGL8_01803559-733
FD_MS_7_1, AnGL28 AnGL28_00042570-733
FD_SO4_25_1_F22, AnGL30 AnGL30_01781629-793
FD_SO4_37_1, AnGL2 AnGL2_02721570-733
FD_YE_25_21, AnGL21 AnGL21_00727560-735
AnGL21_00948531-699
FD_YE_37_3, AnGL26 AnGL26_02254605-768
AnGL26_03896535-702
FD_YE_37_8_2, AnGL3 AnGL3_01858650-814
AnGL3_03159488-654
FD_YE_37_9_2, AnGL4 AnGL4_02404555-720
AnGL4_031941100-1239
Syntrophus buswellii, Sbus Sbus_01539566-730
Syntrophomonas curvata, Scurva Scurva_00579556-720
Scurva_01295867-1011
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01820555-721
Sespor_02391224-390
Sespor_02601864-1001
Syntrophomonas wolfei methylbutyratica, Swm Swm_01008872-1009
Swm_02552556-721
Terrisporobacter hibernicus, AnGL54 AnGL54_020001091-1240
AnGL54_03466555-716
FD-25-21, AnGL21 AnGL21_03197571-746
Sunxiuqinia elliptica, AnGL22 AnGL22_02251605-768
AnGL22_03892535-702
Paraclostridium benzoelyticum, AnGL27 AnGL27_00924555-716
AnGL27_015531092-1239
FD-MS-7-8, AnGL9 AnGL9_00671570-733
FD-YE-37-9-3, AnGL29 AnGL29_004521100-1239
AnGL29_03129555-720
Methylobacterium radiotolerans, GTSA1 PaGL#34_02233540-715
PaGL#34_02253592-758
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_02068578-741
PaGL#35_03963532-698
Syntrophomonas erecta, GB-438 Ga0610585_01047864-1001
Ga0610585_01249224-390
Ga0610585_01817555-721
Variovorax sp., EBFNA2 PaGL#33_02509591-761
PaGL#33_02645580-744
Variovorax paradoxus, 2u118 PaGL#32_03212580-744
PaGL#32_03298591-761
Dietzia cinnamea, 55 PaGL#56_00879601-766
PaGL#56_01275587-756
Maridesulfovibrio salexigens, AnGL23 AnGL23_03756574-740
Exiguobacterium mexicanum, AnGL24 AnGL24_013051086-1225
AnGL24_01989505-664
Clostridium subterminale, CB-LS10-1 AnGL53_011611103-1247
AnGL53_03132574-736
Priestia megaterium, 10L1 PaGL#57_010871100-1237
PaGL#57_02773542-706
PaGL#57_01380575-742
PaGL#57_033931096-1245
Variovorax paradoxus, SPNA7 PaGL#43_03265580-745
PaGL#43_03349590-760
Geodermatophilus sp., RDM14 PaGL#36_01920612-766
PaGL#36_01966595-767
Methylorubrum populi, CTY4 PaGL#39_00880593-759
PaGL#39_04476532-699
Fictibacillus phosphorivorans, TY7 PaGL#38_023171093-1241
PaGL#38_03548551-714
Syntrophomonas wolfei, saponavida Swsap_00103867-1012
Swsap_00748555-718
Bacillus subtilis, 30VD-1 PaGL#66_01416540-703
PaGL#66_024721114-1253
Peribacillus frigoritolerans, 30N-5 PaGL#67_01850541-704
PaGL#67_039421100-1250
Micromonospora inositola, Utrum1 PaGL#61_02405585-754
PaGL#61_05348617-778
Sphingomonas sp., CR2A3 PaGL#62_00705561-723
PaGL#62_02849540-709
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00296555-716
AnGL54_028031091-1240
Niallia taxi, AG-1 PaGL#37_014461100-1247
PaGL#37_02970544-707
MPOB, Sfum 639701692:Sfum_00964507-669
639701992:Sfum_01269573-739
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_01156446-595
Spalm_02493539-705
Ga0128340_103120:Spalm_00645124-262
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11933:Swol_00917872-1008
Ga0065332_112186:Swol_02141556-722
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_15357:Szehn_02755556-721
Ga0124040_127108:Szehn_01569876-1017
Syntrophus aciditrophicus, SB 637859951:SYN_01536566-730
Syntrophus gentianae, DSM8423 Ga0074853_11095:Sgen_01637566-730
Mucilaginibacter gossypii, cycad 4 PaGL#42_00123578-741
PaGL#42_01316533-699
PaGL#42_05033531-697
Ruminococcus callidus, ATCC 27760 Rcal_00739560-718
Rcal_011841111-1253
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