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AnGL53_03317 Locus tags: • Sequence Length: 256

Clostridium subterminale, CB-LS10-1 Batch3_genome_fasta/CB-LS10-1

5050100100150150200200250250300300
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AnGL53_03312 AnGL53_03313 AnGL53_03314 AnGL53_03317 AnGL53_03318 AnGL53_03319 AnGL53_03320 AnGL53_03322 
    [PF01416]_[PF01416]

    [8:PF01416]_[142:PF01416]

    [0:IPR020103]_[5:IPR001406]_[8:IPR020097]_[142:IPR020097]

Looking for similar signatures in the working genomes

PF01416:PseudoU_synth_1. tRNA pseudouridine synthase

Found 140 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514691.1:LOMAGDGF_005066-103
142-244
Clostridium acetobutylicum, DSM 1731 WP_010966380.1:FHOCHPCF_031458-104
142-244
Acetivibrio alkalicellulosi, DSM 17461 2510061294:NJMEOJLD_015236-104
146-244
2510062448:NJMEOJLD_026467-104
144-245
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945044.1:NEIHKHHH_025348-103
148-244
Ruminococcus albus_7, DSM 20455 WP_037304098.1:HCIAFFOI_00963137-240
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112460:GJLLLGJL_024148-104
142-245
Paenibacillus guangzhouensis, KCTC 33171 WP_152395401.1:KDFAKKPF_043826-102
142-255
Clostridium acetobutylicum, ATCC 824 WP_010966380.1:OJAMHIDJ_031548-104
142-244
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697992.1:PROKKA_007518-103
142-245
Syntrophomonas erecta, DSM 16215 OINOEOOJ_024207-103
147-245
FD_25_22, AnGL7 AnGL7_017817-102
144-244
FD_25_27, AnGL8 AnGL8_025007-102
142-245
FD_MS_7_1, AnGL28 AnGL28_010788-105
144-247
FD_SO4_25_1_F22, AnGL30 AnGL30_00167140-244
FD_SO4_37_1, AnGL2 AnGL2_002088-105
144-247
FD_YE_25_21, AnGL21 AnGL21_022365-102
143-244
FD_YE_37_3, AnGL26 AnGL26_04028150-245
FD_YE_37_8_2, AnGL3 AnGL3_002968-105
141-244
FD_YE_37_9_2, AnGL4 AnGL4_004927-105
145-246
AnGL4_00506148-249
AnGL4_0239911-106
146-248
Syntrophus buswellii, Sbus Sbus_007549-104
144-246
Sbus_0093524-118
158-259
Syntrophomonas curvata, Scurva Scurva_027677-103
142-245
Syntrophomonas erecta sporosyntropha, Sespor Sespor_010977-103
147-245
Syntrophomonas wolfei methylbutyratica, Swm Swm_027988-104
142-245
Terrisporobacter hibernicus, AnGL54 AnGL54_013776-105
143-245
AnGL54_033158-103
143-243
FD-25-21, AnGL21 AnGL21_008087-102
144-244
Sunxiuqinia elliptica, AnGL22 AnGL22_04024150-245
Paraclostridium benzoelyticum, AnGL27 AnGL27_007838-104
143-243
AnGL27_027107-105
143-245
FD-MS-7-8, AnGL9 AnGL9_0285311-108
148-250
FD-YE-37-9-3, AnGL29 AnGL29_012177-105
145-246
AnGL29_01231148-249
AnGL29_0312411-106
146-248
Methylobacterium radiotolerans, GTSA1 PaGL#34_034707-102
143-250
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_04474147-244
PaGL#35_06357169-262
Syntrophomonas erecta, GB-438 Ga0610585_024207-103
147-245
Variovorax sp., EBFNA2 PaGL#33_047257-105
145-249
Variovorax paradoxus, 2u118 PaGL#32_014007-101
141-245
Dietzia cinnamea, 55 PaGL#56_0231410-113
153-266
Maridesulfovibrio salexigens, AnGL23 AnGL23_030107-103
144-246
Exiguobacterium mexicanum, AnGL24 AnGL24_029418-103
140-243
Clostridium subterminale, CB-LS10-1 AnGL53_007396-105
143-246
AnGL53_033178-104
142-244
Priestia megaterium, 10L1 PaGL#57_020957-104
142-245
Variovorax paradoxus, SPNA7 PaGL#43_013997-101
141-245
Methanospirillum lacunae, Ki8-1 MLKi8_00867136-234
Geodermatophilus sp., RDM14 PaGL#36_03757139-247
Methylorubrum populi, CTY4 PaGL#39_014537-96
143-250
Fictibacillus phosphorivorans, TY7 PaGL#38_005547-104
143-245
Methanospirillum hungatei, GP1 MhGP1_00836138-235
Methanospirillum stamsii, Pt1 MLKi8_01078136-235
Syntrophomonas wolfei, saponavida Swsap_009351-98
137-239
Bacillus subtilis, 30VD-1 PaGL#66_000208-104
143-246
Peribacillus frigoritolerans, 30N-5 PaGL#67_001068-104
143-245
PaGL#67_043378-105
143-245
Micromonospora inositola, Utrum1 PaGL#61_06384151-254
Sphingomonas sp., CR2A3 PaGL#62_007258-104
143-246
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_001518-103
143-243
AnGL54_021046-105
143-245
Niallia taxi, AG-1 PaGL#37_001697-105
145-245
PaGL#37_010818-105
143-243
Methanospirillum.hungatei GP1, MhGP1 8064048740:MhGP1_02066138-235
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113399:Mhun_03393136-235
MPOB, Sfum 639702435:Sfum_0171531-126
168-268
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_020066-103
142-245
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112460:Swol_024148-104
142-245
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_11899:Szehn_010468-103
142-245
Syntrophus aciditrophicus, SB 637860301:SYN_0186522-117
156-259
637860927:SYN_0243471-165
203-306
Syntrophus gentianae, DSM8423 Ga0074853_12233:Sgen_025219-104
146-246
Sgen_0050525-119
157-260
Mucilaginibacter gossypii, cycad 4 PaGL#42_01524153-248
PaGL#42_05329169-263
Ruminococcus callidus, ATCC 27760 Rcal_01575142-244

PF01416:PseudoU_synth_1. tRNA pseudouridine synthase

Found 140 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514691.1:LOMAGDGF_005066-103
142-244
Clostridium acetobutylicum, DSM 1731 WP_010966380.1:FHOCHPCF_031458-104
142-244
Acetivibrio alkalicellulosi, DSM 17461 2510061294:NJMEOJLD_015236-104
146-244
2510062448:NJMEOJLD_026467-104
144-245
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945044.1:NEIHKHHH_025348-103
148-244
Ruminococcus albus_7, DSM 20455 WP_037304098.1:HCIAFFOI_00963137-240
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112460:GJLLLGJL_024148-104
142-245
Paenibacillus guangzhouensis, KCTC 33171 WP_152395401.1:KDFAKKPF_043826-102
142-255
Clostridium acetobutylicum, ATCC 824 WP_010966380.1:OJAMHIDJ_031548-104
142-244
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697992.1:PROKKA_007518-103
142-245
Syntrophomonas erecta, DSM 16215 OINOEOOJ_024207-103
147-245
FD_25_22, AnGL7 AnGL7_017817-102
144-244
FD_25_27, AnGL8 AnGL8_025007-102
142-245
FD_MS_7_1, AnGL28 AnGL28_010788-105
144-247
FD_SO4_25_1_F22, AnGL30 AnGL30_00167140-244
FD_SO4_37_1, AnGL2 AnGL2_002088-105
144-247
FD_YE_25_21, AnGL21 AnGL21_022365-102
143-244
FD_YE_37_3, AnGL26 AnGL26_04028150-245
FD_YE_37_8_2, AnGL3 AnGL3_002968-105
141-244
FD_YE_37_9_2, AnGL4 AnGL4_004927-105
145-246
AnGL4_00506148-249
AnGL4_0239911-106
146-248
Syntrophus buswellii, Sbus Sbus_007549-104
144-246
Sbus_0093524-118
158-259
Syntrophomonas curvata, Scurva Scurva_027677-103
142-245
Syntrophomonas erecta sporosyntropha, Sespor Sespor_010977-103
147-245
Syntrophomonas wolfei methylbutyratica, Swm Swm_027988-104
142-245
Terrisporobacter hibernicus, AnGL54 AnGL54_013776-105
143-245
AnGL54_033158-103
143-243
FD-25-21, AnGL21 AnGL21_008087-102
144-244
Sunxiuqinia elliptica, AnGL22 AnGL22_04024150-245
Paraclostridium benzoelyticum, AnGL27 AnGL27_007838-104
143-243
AnGL27_027107-105
143-245
FD-MS-7-8, AnGL9 AnGL9_0285311-108
148-250
FD-YE-37-9-3, AnGL29 AnGL29_012177-105
145-246
AnGL29_01231148-249
AnGL29_0312411-106
146-248
Methylobacterium radiotolerans, GTSA1 PaGL#34_034707-102
143-250
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_04474147-244
PaGL#35_06357169-262
Syntrophomonas erecta, GB-438 Ga0610585_024207-103
147-245
Variovorax sp., EBFNA2 PaGL#33_047257-105
145-249
Variovorax paradoxus, 2u118 PaGL#32_014007-101
141-245
Dietzia cinnamea, 55 PaGL#56_0231410-113
153-266
Maridesulfovibrio salexigens, AnGL23 AnGL23_030107-103
144-246
Exiguobacterium mexicanum, AnGL24 AnGL24_029418-103
140-243
Clostridium subterminale, CB-LS10-1 AnGL53_007396-105
143-246
AnGL53_033178-104
142-244
Priestia megaterium, 10L1 PaGL#57_020957-104
142-245
Variovorax paradoxus, SPNA7 PaGL#43_013997-101
141-245
Methanospirillum lacunae, Ki8-1 MLKi8_00867136-234
Geodermatophilus sp., RDM14 PaGL#36_03757139-247
Methylorubrum populi, CTY4 PaGL#39_014537-96
143-250
Fictibacillus phosphorivorans, TY7 PaGL#38_005547-104
143-245
Methanospirillum hungatei, GP1 MhGP1_00836138-235
Methanospirillum stamsii, Pt1 MLKi8_01078136-235
Syntrophomonas wolfei, saponavida Swsap_009351-98
137-239
Bacillus subtilis, 30VD-1 PaGL#66_000208-104
143-246
Peribacillus frigoritolerans, 30N-5 PaGL#67_001068-104
143-245
PaGL#67_043378-105
143-245
Micromonospora inositola, Utrum1 PaGL#61_06384151-254
Sphingomonas sp., CR2A3 PaGL#62_007258-104
143-246
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_001518-103
143-243
AnGL54_021046-105
143-245
Niallia taxi, AG-1 PaGL#37_001697-105
145-245
PaGL#37_010818-105
143-243
Methanospirillum.hungatei GP1, MhGP1 8064048740:MhGP1_02066138-235
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113399:Mhun_03393136-235
MPOB, Sfum 639702435:Sfum_0171531-126
168-268
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_020066-103
142-245
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112460:Swol_024148-104
142-245
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_11899:Szehn_010468-103
142-245
Syntrophus aciditrophicus, SB 637860301:SYN_0186522-117
156-259
637860927:SYN_0243471-165
203-306
Syntrophus gentianae, DSM8423 Ga0074853_12233:Sgen_025219-104
146-246
Sgen_0050525-119
157-260
Mucilaginibacter gossypii, cycad 4 PaGL#42_01524153-248
PaGL#42_05329169-263
Ruminococcus callidus, ATCC 27760 Rcal_01575142-244
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