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PaGL#42_05737 Locus tags: • Sequence Length: 695

Mucilaginibacter gossypii, cycad 4 Batch3_genome_fasta/M.gossypii

5050100100150150200200250250300300350350400400450450500500550550600600650650700700
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PaGL#42_05732 PaGL#42_05735 PaGL#42_05736 PaGL#42_05737 PaGL#42_05738 PaGL#42_05739 PaGL#42_05740 
    [SP]_[PF02018]_[PF06964]_[TM]

    [SP]_[68:PF02018]_[473:PF06964]_[TM]

    [SP]_[68:IPR003305]_[69:IPR008979]_[222:IPR017853]_[473:IPR010720]_[473:IPR010720]_[TM]

Looking for similar signatures in the working genomes

PF02018:CBM_4_9. Carbohydrate binding domain

Found 142 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003512991.1:LOMAGDGF_0018328-162
WP_003515284.1:LOMAGDGF_00411692-834
867-1001
1022-1152
1177-1299
1325-1446
WP_003517483.1:LOMAGDGF_01037237-370
WP_003517278.1:LOMAGDGF_0135236-164
565-699
WP_003519027.1:LOMAGDGF_0186539-179
WP_003518690.1:LOMAGDGF_0186639-179
WP_003513765.1:LOMAGDGF_0260533-164
WP_003516878.1:LOMAGDGF_0289027-113
Clostridium acetobutylicum, DSM 1731 WP_010963882.1:FHOCHPCF_0060841-173
WP_010965184.1:FHOCHPCF_01920656-792
Acetivibrio alkalicellulosi, DSM 17461 2510060360:NJMEOJLD_006081193-1322
2510060509:NJMEOJLD_0075628-162
2510060518:NJMEOJLD_0076535-165
190-319
349-477
501-630
2510060519:NJMEOJLD_0076637-165
198-324
356-485
518-642
2510060598:NJMEOJLD_00845719-860
894-1029
1049-1176
1199-1335
2510061170:NJMEOJLD_0140033-163
571-704
2510062292:NJMEOJLD_0249225-156
2510062367:NJMEOJLD_02567188-303
349-466
2510062493:NJMEOJLD_02692275-386
2510063700:NJMEOJLD_0387825-155
2510063701:NJMEOJLD_0387929-131
2510063761:NJMEOJLD_0393835-167
2510063764:NJMEOJLD_0394140-171
2510063791:NJMEOJLD_0396637-167
746-876
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946515.1:NEIHKHHH_0049528-158
183-312
360-443
529-649
695-818
WP_050753107.1:NEIHKHHH_00918114-243
WP_081926884.1:NEIHKHHH_00931468-576
NEIHKHHH_0111233-164
WP_036942223.1:NEIHKHHH_0150035-174
430-569
601-730
WP_036942225.1:NEIHKHHH_0150238-175
415-558
WP_050753234.1:NEIHKHHH_0150539-177
414-552
WP_036937909.1:NEIHKHHH_01821374-501
537-652
1019-1150
WP_050753291.1:NEIHKHHH_01845364-499
WP_036937969.1:NEIHKHHH_0184630-163
WP_036944512.1:NEIHKHHH_025113051-3182
3221-3346
3371-3511
WP_036942563.1:NEIHKHHH_0259224-156
WP_050753430.1:NEIHKHHH_0277038-168
WP_050753431.1:NEIHKHHH_0277143-174
NEIHKHHH_0277325-156
WP_036938559.1:NEIHKHHH_0365625-156
WP_050753593.1:NEIHKHHH_0365724-155
WP_036938562.1:NEIHKHHH_0365825-156
WP_036938565.1:NEIHKHHH_0365925-156
WP_050753595.1:NEIHKHHH_0366124-155
WP_050753611.1:NEIHKHHH_0379334-185
236-387
881-1004
1044-1169
1207-1334
WP_036936730.1:NEIHKHHH_0387825-156
WP_050753620.1:NEIHKHHH_0389523-154
WP_152966045.1:NEIHKHHH_0389627-154
WP_050753716.1:NEIHKHHH_04557486-635
665-804
940-1052
1099-1229
WP_050753784.1:NEIHKHHH_05006192-315
WP_050753843.1:NEIHKHHH_0528427-158
WP_036939882.1:NEIHKHHH_0566735-155
Ruminococcus albus_7, DSM 20455 WP_013483737.1:HCIAFFOI_03868283-414
HCIAFFOI_00078291-421
WP_013497226.1:HCIAFFOI_00503421-553
WP_013497250.1:HCIAFFOI_0052835-137
WP_013497482.1:HCIAFFOI_0079735-161
WP_013497612.1:HCIAFFOI_00947268-398
WP_013497750.1:HCIAFFOI_0108840-170
WP_013497754.1:HCIAFFOI_0109335-176
WP_013497784.1:HCIAFFOI_01123443-573
WP_013497786.1:HCIAFFOI_01125454-570
621-732
WP_013498054.1:HCIAFFOI_0142339-169
WP_013498134.1:HCIAFFOI_0151033-152
565-698
WP_013498152.1:HCIAFFOI_01538568-699
737-868
WP_013499060.1:HCIAFFOI_0251538-172
WP_013499324.1:HCIAFFOI_02825268-398
Paenibacillus guangzhouensis, KCTC 33171 WP_227793639.1:KDFAKKPF_03287174-295
1614-1737
WP_227793288.1:KDFAKKPF_04244465-488
Clostridium acetobutylicum, ATCC 824 WP_010963882.1:OJAMHIDJ_0060941-173
WP_010965184.1:OJAMHIDJ_01928656-792
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137699048.1:PROKKA_0035240-176
WP_137699056.1:PROKKA_0036135-165
WP_137695877.1:PROKKA_0218439-166
201-337
356-490
FD_SO4_25_1_F22, AnGL30 AnGL30_0053759-195
AnGL30_00642326-451
FD_YE_37_8_2, AnGL3 AnGL3_00392320-446
AnGL3_03128381-518
AnGL3_03129213-334
AnGL3_03619277-419
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0139057-194
PaGL#35_0171721-143
PaGL#35_0229973-217
Exiguobacterium mexicanum, AnGL24 AnGL24_00097376-468
500-629
654-768
Micromonospora inositola, Utrum1 PaGL#61_0231837-158
Mucilaginibacter gossypii, cycad 4 PaGL#42_0368755-192
PaGL#42_0573768-210
Ruminococcus callidus, ATCC 27760 Rcal_0049547-174
Rcal_01463570-699
Rcal_0201932-159
Rcal_0216134-161
563-694
Rcal_02163440-575
Rcal_0218834-161
563-694
Rcal_0242133-161
188-317
Rcal_0262742-133

PF06964:Alpha-L-AF_C. Alpha-L-arabinofuranosidase C-terminal domain

Found 37 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513072.1:LOMAGDGF_00139290-493
Clostridium acetobutylicum, DSM 1731 WP_013913618.1:FHOCHPCF_03490469-826
Acetivibrio alkalicellulosi, DSM 17461 2510063921:NJMEOJLD_04093290-491
Pseudobacteroides cellulosolvens, DSM 2933 WP_036941963.1:NEIHKHHH_03122295-486
Ruminococcus albus_7, DSM 20455 WP_013499521.1:HCIAFFOI_03035298-485
Clostridium acetobutylicum, ATCC 824 WP_010966706.1:OJAMHIDJ_03502469-826
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697103.1:PROKKA_00062290-492
FD_SO4_25_1_F22, AnGL30 AnGL30_00537461-648
AnGL30_00544314-506
FD_YE_37_8_2, AnGL3 AnGL3_01645459-648
AnGL3_01965450-634
AnGL3_03187315-503
AnGL3_03619679-857
FD_YE_37_9_2, AnGL4 AnGL4_01013289-488
AnGL4_01913293-483
FD-YE-37-9-3, AnGL29 AnGL29_01738289-488
AnGL29_02638293-483
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01390458-646
PaGL#35_01748639-808
PaGL#35_02299481-661
PaGL#35_03496318-509
Exiguobacterium mexicanum, AnGL24 AnGL24_02540308-500
Geodermatophilus sp., RDM14 PaGL#36_02117290-492
Bacillus subtilis, 30VD-1 PaGL#66_01467290-490
PaGL#66_01489293-485
Micromonospora inositola, Utrum1 PaGL#61_06520290-493
Sphingomonas sp., CR2A3 PaGL#62_01227331-521
PaGL#62_01854318-508
Niallia taxi, AG-1 PaGL#37_04227851-1240
PaGL#37_01016295-487
PaGL#37_01018292-493
PaGL#37_03624291-492
Mucilaginibacter gossypii, cycad 4 PaGL#42_00594677-833
PaGL#42_01154318-509
PaGL#42_03235458-660
PaGL#42_03687456-645
PaGL#42_05737473-653
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