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Rcal_00832 Locus tags: • Sequence Length: 571

Ruminococcus callidus, ATCC 27760 Batch5_genome_fasta/bc2083

5050100100150150200200250250300300350350400400450450500500550550600600
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Rcal_00827 Rcal_00828 Rcal_00829 Rcal_00832 Rcal_00837 
    [PF05524]_[PF00391]_[PF02896]

    [4:PF05524]_[152:PF00391]_[255:PF02896]

    [4:IPR008731]_[25:IPR036618]_[108:IPR036637]_[152:IPR008279]_[248:IPR015813]_[255:IPR000121]

Looking for similar signatures in the working genomes

PF05524:PEP-utilisers_N. PEP-utilising enzyme, N-terminal

Found 66 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515355.1:LOMAGDGF_003397-130
Clostridium acetobutylicum, DSM 1731 WP_010966368.1:FHOCHPCF_031333-125
Acetivibrio alkalicellulosi, DSM 17461 2510059759:NJMEOJLD_000237-130
Pseudobacteroides cellulosolvens, DSM 2933 WP_036937206.1:NEIHKHHH_044516-128
Ruminococcus albus_7, DSM 20455 WP_013499768.1:HCIAFFOI_032924-126
WP_013497396.1:HCIAFFOI_006844-126
Paenibacillus guangzhouensis, KCTC 33171 WP_152392278.1:KDFAKKPF_007492-126
WP_193727015.1:KDFAKKPF_061493-127
Clostridium acetobutylicum, ATCC 824 WP_010966368.1:OJAMHIDJ_031423-125
FD_25_22, AnGL7 AnGL7_00516174-298
AnGL7_013693-124
AnGL7_01934171-293
FD_25_27, AnGL8 AnGL8_00191119-238
AnGL8_019683-126
AnGL8_02480269-389
AnGL8_02690171-294
FD_MS_7_1, AnGL28 AnGL28_00310192-313
AnGL28_0144612-136
FD_SO4_37_1, AnGL2 AnGL2_0057512-136
AnGL2_02989192-313
FD_YE_25_21, AnGL21 AnGL21_03959262-382
AnGL21_03967119-238
AnGL21_04237278-373
AnGL21_02585173-295
AnGL21_00490265-386
AnGL21_007703-126
FD_YE_37_9_2, AnGL4 AnGL4_005652-123
AnGL4_025472-124
AnGL4_026832-124
AnGL4_028835-126
Syntrophus buswellii, Sbus Sbus_0061813-138
Terrisporobacter hibernicus, AnGL54 AnGL54_023532-124
FD-25-21, AnGL21 AnGL21_00588171-293
AnGL21_011833-124
AnGL21_02112174-298
Paraclostridium benzoelyticum, AnGL27 AnGL27_033332-124
FD-MS-7-8, AnGL9 AnGL9_00428191-312
AnGL9_0200212-136
AnGL9_023307-127
FD-YE-37-9-3, AnGL29 AnGL29_001415-126
AnGL29_012902-123
AnGL29_032722-124
AnGL29_034082-124
Methylobacterium radiotolerans, GTSA1 PaGL#34_00240182-302
Variovorax sp., EBFNA2 PaGL#33_055915-133
Variovorax paradoxus, 2u118 PaGL#32_048765-133
Dietzia cinnamea, 55 PaGL#56_0315411-138
Maridesulfovibrio salexigens, AnGL23 AnGL23_00675269-390
AnGL23_030526-130
Exiguobacterium mexicanum, AnGL24 AnGL24_020764-126
Priestia megaterium, 10L1 PaGL#57_061445-127
Variovorax paradoxus, SPNA7 PaGL#43_050635-133
Geodermatophilus sp., RDM14 PaGL#36_0411517-137
Methylorubrum populi, CTY4 PaGL#39_00775182-302
PaGL#39_01081284-403
Fictibacillus phosphorivorans, TY7 PaGL#38_034776-127
Bacillus subtilis, 30VD-1 PaGL#66_027424-126
Peribacillus frigoritolerans, 30N-5 PaGL#67_041776-127
Sphingomonas sp., CR2A3 PaGL#62_00387279-394
PaGL#62_02772185-305
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_031562-124
Niallia taxi, AG-1 PaGL#37_012444-126
MPOB, Sfum 639701534:Sfum_008028-132
Syntrophus aciditrophicus, SB 637858976:SYN_0062613-138
Syntrophus gentianae, DSM8423 Ga0074853_10958:Sgen_0148613-138
Ruminococcus callidus, ATCC 27760 Rcal_008324-126

PF00391:PEP-utilizers. PEP-utilising enzyme, mobile domain

Found 194 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515355.1:LOMAGDGF_00339159-234
WP_003516984.1:LOMAGDGF_00984419-504
Clostridium acetobutylicum, DSM 1731 WP_010963855.1:FHOCHPCF_00580818-890
WP_010964115.1:FHOCHPCF_00843759-830
WP_010964119.1:FHOCHPCF_00847774-844
WP_010966368.1:FHOCHPCF_03133150-224
Acetivibrio alkalicellulosi, DSM 17461 2510059759:NJMEOJLD_00023155-228
2510059846:NJMEOJLD_00108783-853
2510060217:NJMEOJLD_00470503-574
2510060455:NJMEOJLD_00703133-211
2510063545:NJMEOJLD_03723787-860
2510063689:NJMEOJLD_03867419-504
Pseudobacteroides cellulosolvens, DSM 2933 WP_152965896.1:NEIHKHHH_00496469-513
WP_050753503.1:NEIHKHHH_03184729-799
NEIHKHHH_03188758-829
WP_036939143.1:NEIHKHHH_03408419-504
WP_036936625.1:NEIHKHHH_03929502-574
WP_036937643.1:NEIHKHHH_04185810-880
WP_036937206.1:NEIHKHHH_04451157-232
Ruminococcus albus_7, DSM 20455 WP_013499768.1:HCIAFFOI_03292154-224
WP_013497064.1:HCIAFFOI_00324420-502
WP_013497396.1:HCIAFFOI_00684152-225
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111615:GJLLLGJL_01584419-501
Ga0065332_112183:GJLLLGJL_02138499-572
Paenibacillus guangzhouensis, KCTC 33171 WP_227793394.1:KDFAKKPF_00066424-506
WP_152391992.1:KDFAKKPF_00419789-861
WP_152392278.1:KDFAKKPF_00749155-226
WP_152393617.1:KDFAKKPF_02298161-233
WP_193727015.1:KDFAKKPF_06149152-226
Clostridium acetobutylicum, ATCC 824 WP_010963855.1:OJAMHIDJ_00581818-890
WP_010964115.1:OJAMHIDJ_00846759-830
WP_010964119.1:OJAMHIDJ_00850774-844
WP_010966368.1:OJAMHIDJ_03142150-224
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698271.1:PROKKA_01188502-574
WP_137696215.1:PROKKA_01815419-504
WP_137698922.1:PROKKA_03606775-846
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00339420-502
OINOEOOJ_01814499-572
FD_25_22, AnGL7 AnGL7_00516322-395
AnGL7_01369150-220
AnGL7_01934323-392
AnGL7_02560430-515
FD_25_27, AnGL8 AnGL8_00191265-338
AnGL8_01968151-222
AnGL8_02480413-487
AnGL8_02690321-393
FD_MS_7_1, AnGL28 AnGL28_00310340-410
AnGL28_01112447-530
AnGL28_01446161-235
AnGL28_03239748-819
FD_SO4_25_1_F22, AnGL30 AnGL30_01491455-538
FD_SO4_37_1, AnGL2 AnGL2_00242447-530
AnGL2_00575161-235
AnGL2_02369748-819
AnGL2_02989340-410
FD_YE_25_21, AnGL21 AnGL21_03959408-480
AnGL21_03967264-338
AnGL21_04022382-454
AnGL21_04237398-469
AnGL21_02585319-392
AnGL21_03596393-465
AnGL21_00490410-483
AnGL21_00770151-222
FD_YE_37_3, AnGL26 AnGL26_00687450-532
FD_YE_37_8_2, AnGL3 AnGL3_01238451-533
FD_YE_37_9_2, AnGL4 AnGL4_00141420-502
AnGL4_00565149-223
AnGL4_02547149-223
AnGL4_02683149-223
AnGL4_02883158-228
Syntrophus buswellii, Sbus Sbus_00618163-237
Sbus_01629388-460
Syntrophomonas curvata, Scurva Scurva_00390794-865
Scurva_00408810-882
Scurva_00582499-572
Scurva_02091420-502
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00666420-502
Sespor_01823499-572
Syntrophomonas wolfei methylbutyratica, Swm Swm_00631808-879
Swm_01749419-501
Swm_02418183-252
Swm_02420681-753
Swm_02423797-869
Swm_02549499-572
Terrisporobacter hibernicus, AnGL54 AnGL54_02353150-223
AnGL54_02372421-503
AnGL54_03468504-576
FD-25-21, AnGL21 AnGL21_00101430-515
AnGL21_00588323-392
AnGL21_01183150-220
AnGL21_02112322-395
Sunxiuqinia elliptica, AnGL22 AnGL22_00688450-532
Paraclostridium benzoelyticum, AnGL27 AnGL27_00926504-576
AnGL27_01390420-502
AnGL27_03333150-223
FD-MS-7-8, AnGL9 AnGL9_00428339-409
AnGL9_02002161-235
AnGL9_02330156-230
AnGL9_02963447-530
FD-YE-37-9-3, AnGL29 AnGL29_00141158-228
AnGL29_00866420-502
AnGL29_01290149-223
AnGL29_03272149-223
AnGL29_03408149-223
Methylobacterium radiotolerans, GTSA1 PaGL#34_00240327-401
PaGL#34_03061437-520
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_04019326-392
PaGL#35_06296805-877
Syntrophomonas erecta, GB-438 Ga0610585_00339420-502
Ga0610585_01814499-572
Variovorax sp., EBFNA2 PaGL#33_02152390-462
PaGL#33_05591187-257
Variovorax paradoxus, 2u118 PaGL#32_01865390-462
PaGL#32_04876180-252
Dietzia cinnamea, 55 PaGL#56_03154163-236
Maridesulfovibrio salexigens, AnGL23 AnGL23_00540448-518
AnGL23_00675414-488
AnGL23_01009483-553
AnGL23_01269496-569
AnGL23_01436482-552
AnGL23_02369715-783
AnGL23_03052156-228
Exiguobacterium mexicanum, AnGL24 AnGL24_01984503-575
AnGL24_02076152-225
Clostridium subterminale, CB-LS10-1 AnGL53_01256422-504
AnGL53_03127503-575
AnGL53_03616732-804
Priestia megaterium, 10L1 PaGL#57_02778504-576
PaGL#57_03988465-537
PaGL#57_05656791-863
PaGL#57_05831757-830
PaGL#57_06144153-226
Variovorax paradoxus, SPNA7 PaGL#43_01784390-462
PaGL#43_05063180-252
Methanospirillum lacunae, Ki8-1 MLKi8_01168364-436
MLKi8_02142422-504
Geodermatophilus sp., RDM14 PaGL#36_01572420-503
PaGL#36_04115166-235
Methylorubrum populi, CTY4 PaGL#39_00775327-401
PaGL#39_01081431-502
PaGL#39_02602433-516
Fictibacillus phosphorivorans, TY7 PaGL#38_03477153-226
PaGL#38_03542505-575
Methanospirillum hungatei, GP1 MhGP1_01523362-435
MhGP1_02874423-504
Methanospirillum stamsii, Pt1 MLKi8_01871362-435
MLKi8_03477423-504
Syntrophomonas wolfei, saponavida Swsap_00666797-869
Swsap_00745501-572
Swsap_01438808-880
Swsap_02065420-502
Bacillus subtilis, 30VD-1 PaGL#66_00785751-823
PaGL#66_01421503-575
PaGL#66_02234789-861
PaGL#66_02742152-225
Peribacillus frigoritolerans, 30N-5 PaGL#67_01856504-576
PaGL#67_03440794-866
PaGL#67_04177153-226
Micromonospora inositola, Utrum1 PaGL#61_02644787-859
PaGL#61_05704434-516
Sphingomonas sp., CR2A3 PaGL#62_00387418-492
PaGL#62_01766435-516
PaGL#62_02772332-402
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00298504-576
AnGL54_03156150-223
AnGL54_03176421-503
Niallia taxi, AG-1 PaGL#37_01244152-225
PaGL#37_02965504-574
Methanospirillum.hungatei GP1, MhGP1 8064046653:MhGP1_00029423-504
8064048039:MhGP1_01379362-435
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11150:Mhun_00150362-435
Ga0065338_112064:Mhun_02063423-504
MPOB, Sfum 639701386:Sfum_00644491-563
639701390:Sfum_00649514-586
639701405:Sfum_00666491-561
639701534:Sfum_00802157-231
639702830:Sfum_021241327-1408
639703328:Sfum_02640446-527
639703437:Sfum_02746489-559
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10126:Spalm_00025420-502
Ga0128340_103126:Spalm_00651115-182
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111615:Swol_01584419-501
Ga0065332_112183:Swol_02138499-572
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14412:Szehn_02415420-502
Ga0124040_15360:Szehn_02758500-572
Syntrophus aciditrophicus, SB 637858976:SYN_00626163-237
637859065:SYN_00707390-462
Syntrophus gentianae, DSM8423 Ga0074853_11010:Sgen_01553388-460
Ga0074853_10958:Sgen_01486163-237
Ga0074853_104120:Sgen_00756493-565
Mucilaginibacter gossypii, cycad 4 PaGL#42_00285399-469
PaGL#42_04534804-876
Ruminococcus callidus, ATCC 27760 Rcal_00355424-506
Rcal_00832152-225

PF02896:PEP-utilizers_C. PEP-utilising enzyme, PEP-binding domain

Found 123 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515355.1:LOMAGDGF_00339266-550
WP_003516984.1:LOMAGDGF_00984518-870
Clostridium acetobutylicum, DSM 1731 WP_010966368.1:FHOCHPCF_03133250-538
Acetivibrio alkalicellulosi, DSM 17461 2510059759:NJMEOJLD_00023260-540
2510063689:NJMEOJLD_03867518-869
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939143.1:NEIHKHHH_03408518-870
WP_036937206.1:NEIHKHHH_04451263-544
Ruminococcus albus_7, DSM 20455 WP_013499768.1:HCIAFFOI_03292251-539
WP_013497064.1:HCIAFFOI_00324517-870
WP_013497396.1:HCIAFFOI_00684252-540
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111615:GJLLLGJL_01584518-875
Paenibacillus guangzhouensis, KCTC 33171 WP_227793394.1:KDFAKKPF_00066521-881
WP_152392278.1:KDFAKKPF_00749252-539
WP_193727015.1:KDFAKKPF_06149253-542
Clostridium acetobutylicum, ATCC 824 WP_010966368.1:OJAMHIDJ_03142250-538
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696215.1:PROKKA_01815518-869
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00339516-876
FD_25_22, AnGL7 AnGL7_00516424-711
AnGL7_01369247-539
AnGL7_01934419-707
AnGL7_02560529-881
FD_25_27, AnGL8 AnGL8_00191364-653
AnGL8_01968249-541
AnGL8_02690421-712
FD_MS_7_1, AnGL28 AnGL28_00310442-723
AnGL28_01112564-914
AnGL28_01446261-551
FD_SO4_25_1_F22, AnGL30 AnGL30_01491551-904
FD_SO4_37_1, AnGL2 AnGL2_00242564-914
AnGL2_00575261-551
AnGL2_02989442-723
FD_YE_25_21, AnGL21 AnGL21_03959508-794
AnGL21_03967363-654
AnGL21_04022480-781
AnGL21_02585425-706
AnGL21_03596490-796
AnGL21_00490512-797
AnGL21_00770249-541
AnGL21_0152787-262
FD_YE_37_3, AnGL26 AnGL26_00687547-896
FD_YE_37_8_2, AnGL3 AnGL3_01238547-899
FD_YE_37_9_2, AnGL4 AnGL4_00141516-868
AnGL4_00565252-538
AnGL4_02547253-541
AnGL4_02683253-541
AnGL4_02883261-544
Syntrophus buswellii, Sbus Sbus_00618268-552
Sbus_01629475-791
Syntrophomonas curvata, Scurva Scurva_02091517-877
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00666516-876
Syntrophomonas wolfei methylbutyratica, Swm Swm_01749518-875
Terrisporobacter hibernicus, AnGL54 AnGL54_02353253-538
AnGL54_02372518-869
FD-25-21, AnGL21 AnGL21_00101529-881
AnGL21_00588419-707
AnGL21_01183247-539
AnGL21_02112424-711
Sunxiuqinia elliptica, AnGL22 AnGL22_00688547-896
Paraclostridium benzoelyticum, AnGL27 AnGL27_01390516-868
AnGL27_03333251-539
FD-MS-7-8, AnGL9 AnGL9_00428439-721
AnGL9_02002262-550
AnGL9_02330260-539
AnGL9_02963564-914
FD-YE-37-9-3, AnGL29 AnGL29_00141261-544
AnGL29_00866516-868
AnGL29_01290252-538
AnGL29_03272253-541
AnGL29_03408253-541
Methylobacterium radiotolerans, GTSA1 PaGL#34_00240427-715
PaGL#34_03061533-886
Syntrophomonas erecta, GB-438 Ga0610585_00339516-876
Variovorax sp., EBFNA2 PaGL#33_02152479-796
PaGL#33_05591284-579
Variovorax paradoxus, 2u118 PaGL#32_01865479-796
PaGL#32_04876279-573
Dietzia cinnamea, 55 PaGL#56_03154263-542
Maridesulfovibrio salexigens, AnGL23 AnGL23_00675514-803
AnGL23_01269842-1068
AnGL23_03052260-544
Exiguobacterium mexicanum, AnGL24 AnGL24_02076250-539
Clostridium subterminale, CB-LS10-1 AnGL53_01256518-871
Priestia megaterium, 10L1 PaGL#57_06144250-541
Variovorax paradoxus, SPNA7 PaGL#43_01784479-796
PaGL#43_05063279-573
Methanospirillum lacunae, Ki8-1 MLKi8_01168464-749
MLKi8_02142520-910
Geodermatophilus sp., RDM14 PaGL#36_01572536-890
PaGL#36_04115265-528
Methylorubrum populi, CTY4 PaGL#39_00775427-716
PaGL#39_01081529-822
PaGL#39_02602529-882
Fictibacillus phosphorivorans, TY7 PaGL#38_03477251-540
Methanospirillum hungatei, GP1 MhGP1_01523449-748
MhGP1_02874519-911
Methanospirillum stamsii, Pt1 MLKi8_01871454-748
MLKi8_03477521-911
Syntrophomonas wolfei, saponavida Swsap_02065516-876
Bacillus subtilis, 30VD-1 PaGL#66_02742249-540
Peribacillus frigoritolerans, 30N-5 PaGL#67_04177250-541
Micromonospora inositola, Utrum1 PaGL#61_05704550-900
Sphingomonas sp., CR2A3 PaGL#62_00387525-801
PaGL#62_01766530-882
PaGL#62_02772434-724
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_03156253-538
AnGL54_03176518-869
Niallia taxi, AG-1 PaGL#37_01244249-539
Methanospirillum.hungatei GP1, MhGP1 8064046653:MhGP1_00029519-911
8064048039:MhGP1_01379449-748
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11150:Mhun_00150450-748
Ga0065338_112064:Mhun_02063519-911
MPOB, Sfum 639701534:Sfum_00802259-545
639703328:Sfum_02640561-908
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10126:Spalm_00025516-876
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111615:Swol_01584518-875
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14412:Szehn_02415516-876
Syntrophus aciditrophicus, SB 637858976:SYN_00626267-552
637859065:SYN_00707484-794
Syntrophus gentianae, DSM8423 Ga0074853_11010:Sgen_01553483-788
Ga0074853_10958:Sgen_01486267-552
Mucilaginibacter gossypii, cycad 4 PaGL#42_00285494-803
Ruminococcus callidus, ATCC 27760 Rcal_00355521-874
Rcal_00832255-541
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