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Rcal_01116 Locus tags: • Sequence Length: 453

Ruminococcus callidus, ATCC 27760 Batch5_genome_fasta/bc2083

5050100100150150200200250250300300350350400400450450500500
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Rcal_01112 Rcal_01113 Rcal_01114 Rcal_01116 Rcal_01117 Rcal_01118 Rcal_01119 
    [PF02784]_[PF00278]

    [39:PF02784]_[298:PF00278]

    [28:IPR002986]_[29:IPR029066]_[39:IPR022644]_[63:IPR000183]_[81:IPR002986]_[83:IPR000183]_[170:IPR002986]_[198:IPR000183]_[277:IPR009006]_[287:IPR000183]_[298:IPR022643]_[316:IPR002986]_[388:IPR000183]_[398:IPR002986]

Looking for similar signatures in the working genomes

PF02784:Orn_Arg_deC_N. Pyridoxal-dependent decarboxylase, pyridoxal binding domain

Found 97 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516678.1:LOMAGDGF_0158740-298
Clostridium acetobutylicum, DSM 1731 WP_010963928.1:FHOCHPCF_0065339-295
Acetivibrio alkalicellulosi, DSM 17461 2510060477:NJMEOJLD_0072547-298
2510060483:NJMEOJLD_0073129-276
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946194.1:NEIHKHHH_0031140-298
WP_242857010.1:NEIHKHHH_0253350-313
WP_050753425.1:NEIHKHHH_0275840-281
Ruminococcus albus_7, DSM 20455 WP_013483922.1:HCIAFFOI_0407729-277
WP_013497743.1:HCIAFFOI_0107925-254
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_0148438-293
Paenibacillus guangzhouensis, KCTC 33171 WP_152394011.1:KDFAKKPF_0273440-297
Clostridium acetobutylicum, ATCC 824 WP_010963928.1:OJAMHIDJ_0065439-295
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698509.1:PROKKA_0123435-278
WP_137698299.1:PROKKA_0257722-273
WP_137696740.1:PROKKA_0276083-349
PROKKA_0299244-287
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0149742-295
FD_25_22, AnGL7 AnGL7_0005735-281
AnGL7_0090083-347
AnGL7_0140339-274
FD_25_27, AnGL8 AnGL8_0306835-282
FD_MS_7_1, AnGL28 AnGL28_0062927-284
AnGL28_0301031-278
FD_SO4_25_1_F22, AnGL30 AnGL30_0117573-342
AnGL30_0204829-271
FD_SO4_37_1, AnGL2 AnGL2_0213931-278
AnGL2_0330827-284
FD_YE_25_21, AnGL21 AnGL21_0305135-282
FD_YE_37_3, AnGL26 AnGL26_0065175-342
AnGL26_0125647-278
FD_YE_37_8_2, AnGL3 AnGL3_0045197-366
AnGL3_0150130-271
FD_YE_37_9_2, AnGL4 AnGL4_0285985-349
AnGL4_0302639-281
Syntrophus buswellii, Sbus Sbus_0122135-279
Syntrophomonas curvata, Scurva Scurva_0199340-295
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0214242-295
Syntrophomonas wolfei methylbutyratica, Swm Swm_0165639-293
Terrisporobacter hibernicus, AnGL54 AnGL54_0085824-265
AnGL54_0148939-296
FD-25-21, AnGL21 AnGL21_0114939-274
AnGL21_0166783-347
AnGL21_0256335-281
Sunxiuqinia elliptica, AnGL22 AnGL22_0065275-342
AnGL22_0125847-278
Paraclostridium benzoelyticum, AnGL27 AnGL27_0248840-296
FD-MS-7-8, AnGL9 AnGL9_00933109-367
AnGL9_0282631-278
FD-YE-37-9-3, AnGL29 AnGL29_0011785-349
AnGL29_0028439-281
Methylobacterium radiotolerans, GTSA1 PaGL#34_0439334-261
PaGL#34_0510929-269
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0309167-313
PaGL#35_0549940-271
Syntrophomonas erecta, GB-438 Ga0610585_0149742-295
Variovorax sp., EBFNA2 PaGL#33_0104851-291
Variovorax paradoxus, 2u118 PaGL#32_0109552-292
Dietzia cinnamea, 55 PaGL#56_0192171-330
Maridesulfovibrio salexigens, AnGL23 AnGL23_0134634-279
Exiguobacterium mexicanum, AnGL24 AnGL24_0060044-291
Clostridium subterminale, CB-LS10-1 AnGL53_0038436-292
AnGL53_0294938-296
Priestia megaterium, 10L1 PaGL#57_0316739-296
PaGL#57_0511039-297
Variovorax paradoxus, SPNA7 PaGL#43_0109452-292
Methanospirillum lacunae, Ki8-1 MLKi8_0100939-293
Geodermatophilus sp., RDM14 PaGL#36_0343069-326
Methylorubrum populi, CTY4 PaGL#39_0156834-251
PaGL#39_0179028-269
PaGL#39_0313152-299
Fictibacillus phosphorivorans, TY7 PaGL#38_0286438-297
Methanospirillum hungatei, GP1 MhGP1_0125650-292
Methanospirillum stamsii, Pt1 MLKi8_0154448-291
Syntrophomonas wolfei, saponavida Swsap_0214640-296
Bacillus subtilis, 30VD-1 PaGL#66_0195940-298
Peribacillus frigoritolerans, 30N-5 PaGL#67_0233958-314
Micromonospora inositola, Utrum1 PaGL#61_0605470-325
Sphingomonas sp., CR2A3 PaGL#62_0018737-264
PaGL#62_0020334-261
PaGL#62_0242838-282
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0158824-265
AnGL54_0229639-296
Niallia taxi, AG-1 PaGL#37_0256539-296
PaGL#37_0317737-246
Methanospirillum.hungatei GP1, MhGP1 8064048310:MhGP1_0164750-292
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11506:Mhun_0050450-292
MPOB, Sfum 639700810:Sfum_0006347-289
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11857:Spalm_0236629-277
Spalm_0183947-293
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_0148438-293
Syntrophomonas zehnderi, OL-4 Szehn Szehn_0086033-272
Syntrophus aciditrophicus, SB 637859763:SYN_0135635-279
Syntrophus gentianae, DSM8423 Ga0074853_10595:Sgen_0091535-279
Mucilaginibacter gossypii, cycad 4 PaGL#42_0047940-271
PaGL#42_0142267-313
PaGL#42_0311362-309
Ruminococcus callidus, ATCC 27760 Rcal_0111639-298

PF00278:Orn_DAP_Arg_deC. Pyridoxal-dependent decarboxylase, C-terminal sheet domain

Found 97 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516678.1:LOMAGDGF_01587298-389
Clostridium acetobutylicum, DSM 1731 WP_010963928.1:FHOCHPCF_00653295-386
Acetivibrio alkalicellulosi, DSM 17461 2510060477:NJMEOJLD_00725298-389
2510060483:NJMEOJLD_00731278-367
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946194.1:NEIHKHHH_00311298-389
WP_036938180.1:NEIHKHHH_01963101-336
WP_050753425.1:NEIHKHHH_02758281-375
Ruminococcus albus_7, DSM 20455 WP_013483922.1:HCIAFFOI_04077278-367
WP_013497743.1:HCIAFFOI_01079254-344
WP_013499458.1:HCIAFFOI_02970138-338
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_01484301-385
Paenibacillus guangzhouensis, KCTC 33171 WP_152394011.1:KDFAKKPF_02734297-388
Clostridium acetobutylicum, ATCC 824 WP_010963928.1:OJAMHIDJ_00654295-386
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698509.1:PROKKA_01234278-371
WP_137698299.1:PROKKA_02577273-365
WP_137696738.1:PROKKA_0275892-335
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01497295-387
FD_25_22, AnGL7 AnGL7_00057281-374
AnGL7_01403274-369
FD_25_27, AnGL8 AnGL8_03068282-370
FD_MS_7_1, AnGL28 AnGL28_00622136-328
AnGL28_03010279-368
FD_SO4_25_1_F22, AnGL30 AnGL30_0003186-348
AnGL30_0204815-361
FD_SO4_37_1, AnGL2 AnGL2_02139279-368
AnGL2_03301136-328
FD_YE_25_21, AnGL21 AnGL21_03051282-370
FD_YE_37_3, AnGL26 AnGL26_01256279-368
AnGL26_04234192-336
FD_YE_37_8_2, AnGL3 AnGL3_0098912-336
AnGL3_0150116-360
FD_YE_37_9_2, AnGL4 AnGL4_0286156-342
AnGL4_03026281-373
Syntrophus buswellii, Sbus Sbus_01221279-369
Syntrophomonas curvata, Scurva Scurva_01993295-387
Syntrophomonas erecta sporosyntropha, Sespor Sespor_02142295-387
Syntrophomonas wolfei methylbutyratica, Swm Swm_01656310-385
Terrisporobacter hibernicus, AnGL54 AnGL54_00858265-380
AnGL54_01489296-388
FD-25-21, AnGL21 AnGL21_01149274-369
AnGL21_02563281-374
Sunxiuqinia elliptica, AnGL22 AnGL22_01258279-368
AnGL22_04230192-336
Paraclostridium benzoelyticum, AnGL27 AnGL27_02488296-387
FD-MS-7-8, AnGL9 AnGL9_00927143-335
AnGL9_02826279-368
FD-YE-37-9-3, AnGL29 AnGL29_0011956-342
AnGL29_00284281-373
Methylobacterium radiotolerans, GTSA1 PaGL#34_04393261-373
PaGL#34_05109269-366
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_03091313-409
PaGL#35_0549917-360
Syntrophomonas erecta, GB-438 Ga0610585_01497295-387
Variovorax sp., EBFNA2 PaGL#33_01048291-380
Variovorax paradoxus, 2u118 PaGL#32_01095292-381
Dietzia cinnamea, 55 PaGL#56_01921336-427
Maridesulfovibrio salexigens, AnGL23 AnGL23_01346279-369
Exiguobacterium mexicanum, AnGL24 AnGL24_00600291-382
Clostridium subterminale, CB-LS10-1 AnGL53_00384292-385
AnGL53_02949296-387
Priestia megaterium, 10L1 PaGL#57_03167296-388
PaGL#57_05110297-388
Variovorax paradoxus, SPNA7 PaGL#43_01094292-381
Methanospirillum lacunae, Ki8-1 MLKi8_01009293-383
Geodermatophilus sp., RDM14 PaGL#36_03430346-429
Methylorubrum populi, CTY4 PaGL#39_01568251-373
PaGL#39_01790269-366
PaGL#39_0313142-395
Fictibacillus phosphorivorans, TY7 PaGL#38_02864297-389
Methanospirillum hungatei, GP1 MhGP1_01256292-382
Methanospirillum stamsii, Pt1 MLKi8_01544291-381
Syntrophomonas wolfei, saponavida Swsap_02146296-387
Bacillus subtilis, 30VD-1 PaGL#66_01959298-390
Peribacillus frigoritolerans, 30N-5 PaGL#67_0233950-406
Micromonospora inositola, Utrum1 PaGL#61_06054325-417
Sphingomonas sp., CR2A3 PaGL#62_00187264-373
PaGL#62_00203263-346
PaGL#62_0242829-370
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01588265-380
AnGL54_02296296-388
Niallia taxi, AG-1 PaGL#37_02565296-388
PaGL#37_03177246-335
Methanospirillum.hungatei GP1, MhGP1 8064048310:MhGP1_01647292-382
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11506:Mhun_00504292-382
MPOB, Sfum 639700810:Sfum_0006339-379
639702688:Sfum_0197612-334
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11857:Spalm_02366278-367
Spalm_01839293-385
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_01484301-385
Syntrophomonas zehnderi, OL-4 Szehn Szehn_0086024-365
Syntrophus aciditrophicus, SB 637859763:SYN_01356279-369
Syntrophus gentianae, DSM8423 Ga0074853_10595:Sgen_00915279-369
Mucilaginibacter gossypii, cycad 4 PaGL#42_0047917-367
PaGL#42_01422313-409
PaGL#42_03113309-399
Ruminococcus callidus, ATCC 27760 Rcal_01102145-339
Rcal_01116298-389
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