SMPP Home

NJMEOJLD_00399 Locus tags: • Sequence Length: 714

Acetivibrio alkalicellulosi, DSM 17461 Gs0011839

5050100100150150200200250250300300350350400400450450500500550550600600650650700700750750
Show complete sequence
Click domain (colored bar) to show sequence
NJMEOJLD_00398 NJMEOJLD_01306 NJMEOJLD_00399 NJMEOJLD_03994 NJMEOJLD_03997 NJMEOJLD_00400 
    [SP]_[PF01270]_[PF03425]_[TM]

    [SP]_[41:PF01270]_[417:PF03425]_[TM]

    [SP]_[41:IPR002037]_[42:IPR008928]_[96:IPR002037]_[154:IPR002037]_[216:IPR002037]_[258:IPR002037]_[279:IPR002037]_[375:IPR002037]_[417:IPR005087]_[418:IPR008979]_[607:IPR016134]_[607:IPR036439]_[TM]

Looking for similar signatures in the working genomes

PF01270:Glyco_hydro_8. Glycosyl hydrolases family 8

Found 26 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003512420.1:LOMAGDGF_0202338-385
WP_003516866.1:LOMAGDGF_0291060-230
Acetivibrio alkalicellulosi, DSM 17461 2510060141:NJMEOJLD_0039941-388
2510060364:NJMEOJLD_0061256-367
2510061753:NJMEOJLD_0196888-400
Pseudobacteroides cellulosolvens, DSM 2933 WP_242853231.1:NEIHKHHH_0045193-406
WP_050753003.1:NEIHKHHH_004707-163
WP_081926996.1:NEIHKHHH_0069693-405
WP_036944617.1:NEIHKHHH_0356730-373
Ruminococcus albus_7, DSM 20455 WP_013496899.1:HCIAFFOI_0014850-240
Paenibacillus guangzhouensis, KCTC 33171 KDFAKKPF_0082866-416
WP_152393219.1:KDFAKKPF_018281019-1376
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137699060.1:PROKKA_0035049-399
WP_137699053.1:PROKKA_0035888-398
WP_137696845.1:PROKKA_02876565-897
FD_MS_7_1, AnGL28 AnGL28_0047936-353
FD_SO4_37_1, AnGL2 AnGL2_0315836-353
Methylobacterium radiotolerans, GTSA1 PaGL#34_0037958-373
PaGL#34_0516939-355
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0558058-401
Variovorax sp., EBFNA2 PaGL#33_0307428-333
Geodermatophilus sp., RDM14 PaGL#36_0030645-274
PaGL#36_0030963-307
Methylorubrum populi, CTY4 PaGL#39_0120894-410
Peribacillus frigoritolerans, 30N-5 PaGL#67_0097766-417
Mucilaginibacter gossypii, cycad 4 PaGL#42_0038464-407

PF03425:CBM_11. Carbohydrate binding domain (family 11)

Found 6 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517826.1:LOMAGDGF_02311655-828
Acetivibrio alkalicellulosi, DSM 17461 2510060141:NJMEOJLD_00399417-578
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753856.1:NEIHKHHH_05345966-1130
Paenibacillus guangzhouensis, KCTC 33171 WP_152393356.1:KDFAKKPF_01995614-756
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698039.1:PROKKA_00806354-525
Ruminococcus callidus, ATCC 27760 Rcal_01932531-697
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA