SMPP Home CAzy/dbCAN/HMMER Active Sites

PROKKA_00575 Locus tags: • Sequence Length: 279

Ruminiclostridium herbifermentans MA18, DSM 109966 GCF_005473905.2

5050100100150150200200250250300300
Show complete sequence
Click domain (colored bar) to show sequence
unknown PROKKA_00574 PROKKA_00575 PROKKA_00576 PROKKA_00577 PROKKA_00578 PROKKA_00579 
    [PF02627]_[PF02627]_[TM]

    [33:PF02627]_[184:PF02627]_[TM]

    [2:IPR029032]_[33:IPR003779]_[142:IPR029032]_[184:IPR003779]_[TM]

Looking for similar signatures in the working genomes

PF02627:CMD. Carboxymuconolactone decarboxylase family

Found 197 similar signatures
Ruminococcus albus_7, DSM 20455 WP_013497235.1:HCIAFFOI_0051218-104
Paenibacillus guangzhouensis, KCTC 33171 WP_152391940.1:KDFAKKPF_0036534-114
WP_152395580.1:KDFAKKPF_0460911-93
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697525.1:PROKKA_0057533-118
184-256
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0095729-105
OINOEOOJ_0131523-101
FD_25_27, AnGL8 AnGL8_0054878-151
AnGL8_0095446-125
AnGL8_0098737-113
AnGL8_0099545-120
FD_YE_25_21, AnGL21 AnGL21_0418227-107
AnGL21_0082134-78
AnGL21_0127643-95
AnGL21_0193847-136
FD_YE_37_3, AnGL26 AnGL26_0142726-106
AnGL26_0352315-93
AnGL26_0403443-104
FD_YE_37_8_2, AnGL3 AnGL3_0069122-103
AnGL3_0102455-92
AnGL3_0131928-107
AnGL3_0351752-92
Syntrophus buswellii, Sbus Sbus_0181944-120
Syntrophomonas curvata, Scurva Scurva_0154262-142
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0004829-105
Sespor_0232324-102
Syntrophomonas wolfei methylbutyratica, Swm Swm_0255516-97
Terrisporobacter hibernicus, AnGL54 AnGL54_0176427-106
Sunxiuqinia elliptica, AnGL22 AnGL22_0142926-106
AnGL22_0351815-93
AnGL22_0403043-104
Paraclostridium benzoelyticum, AnGL27 AnGL27_0354126-106
Methylobacterium radiotolerans, GTSA1 PaGL#34_0025645-124
PaGL#34_0661813-97
PaGL#34_0113423-106
PaGL#34_0356633-103
165-237
PaGL#34_0357037-118
PaGL#34_0471647-101
PaGL#34_0489724-107
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0026227-105
PaGL#35_0048612-94
PaGL#35_0087242-98
PaGL#35_0090555-101
PaGL#35_0090749-117
PaGL#35_0091253-100
PaGL#35_01078140-185
PaGL#35_0234127-98
PaGL#35_0259334-70
PaGL#35_0315450-116
PaGL#35_0316546-103
PaGL#35_0322443-121
PaGL#35_0322542-118
PaGL#35_0336932-115
PaGL#35_0365562-111
PaGL#35_0417042-119
PaGL#35_0463811-94
PaGL#35_0474220-70
85-151
PaGL#35_0474320-71
PaGL#35_0474632-70
PaGL#35_0546644-105
PaGL#35_0571043-115
PaGL#35_0573153-102
PaGL#35_061970-41
Syntrophomonas erecta, GB-438 Sere_093129-105
Sere_128823-101
Variovorax sp., EBFNA2 PaGL#33_0608914-95
PaGL#33_0625046-120
PaGL#33_0626035-115
PaGL#33_0093242-121
PaGL#33_0235839-126
PaGL#33_0240846-128
PaGL#33_0269562-145
PaGL#33_0293650-121
PaGL#33_0319643-127
PaGL#33_0357211-93
PaGL#33_036105-64
PaGL#33_0361711-93
PaGL#33_0399552-119
PaGL#33_0503540-126
PaGL#33_0593318-97
Variovorax paradoxus, 2u118 PaGL#32_0545750-128
PaGL#32_0547730-107
PaGL#32_0555413-95
PaGL#32_0045769-140
PaGL#32_0601210-92
PaGL#32_0604211-93
PaGL#32_0630350-118
PaGL#32_064475-88
PaGL#32_0266242-120
PaGL#32_0339245-122
PaGL#32_0342941-128
PaGL#32_0367350-114
PaGL#32_0377943-129
PaGL#32_0514115-97
Dietzia cinnamea, 55 PaGL#56_0149494-168
PaGL#56_0201541-118
PaGL#56_0238712-96
PaGL#56_0269570-140
PaGL#56_0305238-118
PaGL#56_0305641-95
PaGL#56_0309167-145
Maridesulfovibrio salexigens, AnGL23 AnGL23_0329923-102
AnGL23_0353721-95
Clostridium subterminale, CB-LS10-1 AnGL53_0101027-106
Priestia megaterium, 10L1 PaGL#57_0252938-122
PaGL#57_0255627-110
PaGL#57_0386017-101
PaGL#57_0389435-119
PaGL#57_0390619-104
PaGL#57_064260-75
107-181
Variovorax paradoxus, SPNA7 PaGL#43_0552741-118
PaGL#43_0556413-95
PaGL#43_0043073-144
PaGL#43_0625450-118
PaGL#43_0639227-110
PaGL#43_0192841-109
PaGL#43_0343245-94
PaGL#43_0346741-128
PaGL#43_0371350-115
PaGL#43_0382343-129
PaGL#43_0410537-100
PaGL#43_0416646-118
PaGL#43_0534315-97
Methanospirillum lacunae, Ki8-1 MLKi8_0053157-128
MLKi8_0106051-117
MLKi8_0138626-102
MLKi8_034488-78
Geodermatophilus sp., RDM14 PaGL#36_0095540-124
PaGL#36_0265636-119
Fictibacillus phosphorivorans, TY7 PaGL#38_0378812-94
PaGL#38_0391232-115
Methanospirillum stamsii, Pt1 MLKi8_003658-79
MLKi8_0061454-126
MLKi8_0102357-127
MLKi8_0173726-102
MLKi8_0246237-112
Syntrophomonas wolfei, saponavida Swsap_0076020-102
Swsap_0146025-101
Bacillus subtilis, 30VD-1 PaGL#66_0103726-109
PaGL#66_0164416-53
PaGL#66_0364711-91
Peribacillus frigoritolerans, 30N-5 PaGL#67_0135314-93
PaGL#67_0273426-107
162-245
PaGL#67_0359726-103
PaGL#67_0483327-109
Micromonospora inositola, Utrum1 PaGL#61_0052549-109
PaGL#61_0158795-175
PaGL#61_0266914-96
PaGL#61_0270641-87
PaGL#61_0286734-116
PaGL#61_0334040-123
PaGL#61_0368345-96
PaGL#61_0370618-102
PaGL#61_0389328-100
PaGL#61_0479356-109
PaGL#61_0490064-104
PaGL#61_0582110-91
PaGL#61_0671914-96
Sphingomonas sp., CR2A3 PaGL#62_0016213-92
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0256827-106
Niallia taxi, AG-1 PaGL#37_0556226-106
162-245
PaGL#37_0513426-107
162-242
PaGL#37_0326227-110
Methanospirillum.hungatei GP1, MhGP1 8064047730:MhGP1_0108352-126
8064048115:MhGP1_0145526-102
8064048808:MhGP1_0213457-127
8064049506:MhGP1_028208-87
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11280:Mhun_0028026-102
Ga0065338_112531:Mhun_025298-80
Ga0065338_113291:Mhun_0328857-127
MPOB, Sfum 639702865:Sfum_0215969-155
202-288
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112189:Swol_0214416-97
Syntrophus aciditrophicus, SB 637860270:SYN_0183874-150
Syntrophus gentianae, DSM8423 Sgen_0124444-120
Ga0074853_104177:Sgen_0081417-99
Ga0074853_103210:Sgen_006342-66
121-193
Mucilaginibacter gossypii, cycad 4 PaGL#42_0029311-93
PaGL#42_0087744-117
PaGL#42_0161719-94
PaGL#42_04244140-188
PaGL#42_0461427-105
PaGL#42_0542823-94
PaGL#42_0549821-94
Ruminococcus callidus, ATCC 27760 Rcal_0269916-103

PF02627:CMD. Carboxymuconolactone decarboxylase family

Found 197 similar signatures
Ruminococcus albus_7, DSM 20455 WP_013497235.1:HCIAFFOI_0051218-104
Paenibacillus guangzhouensis, KCTC 33171 WP_152391940.1:KDFAKKPF_0036534-114
WP_152395580.1:KDFAKKPF_0460911-93
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697525.1:PROKKA_0057533-118
184-256
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0095729-105
OINOEOOJ_0131523-101
FD_25_27, AnGL8 AnGL8_0054878-151
AnGL8_0095446-125
AnGL8_0098737-113
AnGL8_0099545-120
FD_YE_25_21, AnGL21 AnGL21_0418227-107
AnGL21_0082134-78
AnGL21_0127643-95
AnGL21_0193847-136
FD_YE_37_3, AnGL26 AnGL26_0142726-106
AnGL26_0352315-93
AnGL26_0403443-104
FD_YE_37_8_2, AnGL3 AnGL3_0069122-103
AnGL3_0102455-92
AnGL3_0131928-107
AnGL3_0351752-92
Syntrophus buswellii, Sbus Sbus_0181944-120
Syntrophomonas curvata, Scurva Scurva_0154262-142
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0004829-105
Sespor_0232324-102
Syntrophomonas wolfei methylbutyratica, Swm Swm_0255516-97
Terrisporobacter hibernicus, AnGL54 AnGL54_0176427-106
Sunxiuqinia elliptica, AnGL22 AnGL22_0142926-106
AnGL22_0351815-93
AnGL22_0403043-104
Paraclostridium benzoelyticum, AnGL27 AnGL27_0354126-106
Methylobacterium radiotolerans, GTSA1 PaGL#34_0025645-124
PaGL#34_0661813-97
PaGL#34_0113423-106
PaGL#34_0356633-103
165-237
PaGL#34_0357037-118
PaGL#34_0471647-101
PaGL#34_0489724-107
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0026227-105
PaGL#35_0048612-94
PaGL#35_0087242-98
PaGL#35_0090555-101
PaGL#35_0090749-117
PaGL#35_0091253-100
PaGL#35_01078140-185
PaGL#35_0234127-98
PaGL#35_0259334-70
PaGL#35_0315450-116
PaGL#35_0316546-103
PaGL#35_0322443-121
PaGL#35_0322542-118
PaGL#35_0336932-115
PaGL#35_0365562-111
PaGL#35_0417042-119
PaGL#35_0463811-94
PaGL#35_0474220-70
85-151
PaGL#35_0474320-71
PaGL#35_0474632-70
PaGL#35_0546644-105
PaGL#35_0571043-115
PaGL#35_0573153-102
PaGL#35_061970-41
Syntrophomonas erecta, GB-438 Sere_093129-105
Sere_128823-101
Variovorax sp., EBFNA2 PaGL#33_0608914-95
PaGL#33_0625046-120
PaGL#33_0626035-115
PaGL#33_0093242-121
PaGL#33_0235839-126
PaGL#33_0240846-128
PaGL#33_0269562-145
PaGL#33_0293650-121
PaGL#33_0319643-127
PaGL#33_0357211-93
PaGL#33_036105-64
PaGL#33_0361711-93
PaGL#33_0399552-119
PaGL#33_0503540-126
PaGL#33_0593318-97
Variovorax paradoxus, 2u118 PaGL#32_0545750-128
PaGL#32_0547730-107
PaGL#32_0555413-95
PaGL#32_0045769-140
PaGL#32_0601210-92
PaGL#32_0604211-93
PaGL#32_0630350-118
PaGL#32_064475-88
PaGL#32_0266242-120
PaGL#32_0339245-122
PaGL#32_0342941-128
PaGL#32_0367350-114
PaGL#32_0377943-129
PaGL#32_0514115-97
Dietzia cinnamea, 55 PaGL#56_0149494-168
PaGL#56_0201541-118
PaGL#56_0238712-96
PaGL#56_0269570-140
PaGL#56_0305238-118
PaGL#56_0305641-95
PaGL#56_0309167-145
Maridesulfovibrio salexigens, AnGL23 AnGL23_0329923-102
AnGL23_0353721-95
Clostridium subterminale, CB-LS10-1 AnGL53_0101027-106
Priestia megaterium, 10L1 PaGL#57_0252938-122
PaGL#57_0255627-110
PaGL#57_0386017-101
PaGL#57_0389435-119
PaGL#57_0390619-104
PaGL#57_064260-75
107-181
Variovorax paradoxus, SPNA7 PaGL#43_0552741-118
PaGL#43_0556413-95
PaGL#43_0043073-144
PaGL#43_0625450-118
PaGL#43_0639227-110
PaGL#43_0192841-109
PaGL#43_0343245-94
PaGL#43_0346741-128
PaGL#43_0371350-115
PaGL#43_0382343-129
PaGL#43_0410537-100
PaGL#43_0416646-118
PaGL#43_0534315-97
Methanospirillum lacunae, Ki8-1 MLKi8_0053157-128
MLKi8_0106051-117
MLKi8_0138626-102
MLKi8_034488-78
Geodermatophilus sp., RDM14 PaGL#36_0095540-124
PaGL#36_0265636-119
Fictibacillus phosphorivorans, TY7 PaGL#38_0378812-94
PaGL#38_0391232-115
Methanospirillum stamsii, Pt1 MLKi8_003658-79
MLKi8_0061454-126
MLKi8_0102357-127
MLKi8_0173726-102
MLKi8_0246237-112
Syntrophomonas wolfei, saponavida Swsap_0076020-102
Swsap_0146025-101
Bacillus subtilis, 30VD-1 PaGL#66_0103726-109
PaGL#66_0164416-53
PaGL#66_0364711-91
Peribacillus frigoritolerans, 30N-5 PaGL#67_0135314-93
PaGL#67_0273426-107
162-245
PaGL#67_0359726-103
PaGL#67_0483327-109
Micromonospora inositola, Utrum1 PaGL#61_0052549-109
PaGL#61_0158795-175
PaGL#61_0266914-96
PaGL#61_0270641-87
PaGL#61_0286734-116
PaGL#61_0334040-123
PaGL#61_0368345-96
PaGL#61_0370618-102
PaGL#61_0389328-100
PaGL#61_0479356-109
PaGL#61_0490064-104
PaGL#61_0582110-91
PaGL#61_0671914-96
Sphingomonas sp., CR2A3 PaGL#62_0016213-92
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0256827-106
Niallia taxi, AG-1 PaGL#37_0556226-106
162-245
PaGL#37_0513426-107
162-242
PaGL#37_0326227-110
Methanospirillum.hungatei GP1, MhGP1 8064047730:MhGP1_0108352-126
8064048115:MhGP1_0145526-102
8064048808:MhGP1_0213457-127
8064049506:MhGP1_028208-87
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11280:Mhun_0028026-102
Ga0065338_112531:Mhun_025298-80
Ga0065338_113291:Mhun_0328857-127
MPOB, Sfum 639702865:Sfum_0215969-155
202-288
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112189:Swol_0214416-97
Syntrophus aciditrophicus, SB 637860270:SYN_0183874-150
Syntrophus gentianae, DSM8423 Sgen_0124444-120
Ga0074853_104177:Sgen_0081417-99
Ga0074853_103210:Sgen_006342-66
121-193
Mucilaginibacter gossypii, cycad 4 PaGL#42_0029311-93
PaGL#42_0087744-117
PaGL#42_0161719-94
PaGL#42_04244140-188
PaGL#42_0461427-105
PaGL#42_0542823-94
PaGL#42_0549821-94
Ruminococcus callidus, ATCC 27760 Rcal_0269916-103
Search by locus tag: Search
↑ Top




v4.1 @copyright 2026 UCLA