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PROKKA_02459 Locus tags: • Sequence Length: 468

Ruminiclostridium herbifermentans MA18, DSM 109966 GCF_005473905.2

5050100100150150200200250250300300350350400400450450500500
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PROKKA_02454 PROKKA_02455 PROKKA_02456 PROKKA_02458 PROKKA_02459 PROKKA_02460 PROKKA_02462 PROKKA_02463 
    [PF02321]_[PF13437]_[TM]

    [93:PF02321]_[252:PF13437]_[TM]

    [93:IPR003423]_[TM]

Looking for similar signatures in the working genomes

PF02321:OEP. Outer membrane efflux protein

Found 588 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515923.1:LOMAGDGF_0250696-190
WP_003515919.1:LOMAGDGF_0250892-192
258-360
WP_003515917.1:LOMAGDGF_02509109-204
279-378
WP_003514235.1:LOMAGDGF_02867110-197
Acetivibrio alkalicellulosi, DSM 17461 2510060198:NJMEOJLD_00452119-207
272-380
2510060199:NJMEOJLD_0045391-193
272-378
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11147:GJLLLGJL_00143106-201
245-363
Paenibacillus guangzhouensis, KCTC 33171 WP_193726834.1:KDFAKKPF_01805193-285
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697904.1:PROKKA_0245993-205
WP_137698634.1:PROKKA_03664106-208
WP_137698635.1:PROKKA_03665142-239
308-413
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02072137-233
294-383
FD_25_22, AnGL7 AnGL7_0033060-262
286-452
AnGL7_0036326-208
233-419
AnGL7_0056967-244
274-450
AnGL7_0148639-222
254-431
AnGL7_0186065-248
276-454
AnGL7_0239572-251
279-455
AnGL7_0250731-222
247-436
FD_25_27, AnGL8 AnGL8_0001724-216
236-420
AnGL8_0005024-214
237-424
AnGL8_0030764-248
277-454
AnGL8_0032798-257
AnGL8_0033934-237
265-446
AnGL8_0155425-215
238-431
AnGL8_0049267-243
274-450
AnGL8_0231263-242
267-448
FD_MS_7_1, AnGL28 AnGL28_0007425-205
232-399
AnGL28_0038032-261
291-478
AnGL28_0044129-208
241-425
AnGL28_0211184-316
344-520
AnGL28_0225726-219
245-434
AnGL28_0267257-238
269-444
AnGL28_0296866-257
287-448
AnGL28_0305160-249
277-455
AnGL28_0336327-212
235-414
FD_SO4_25_1_F22, AnGL30 AnGL30_0015260-242
268-433
AnGL30_0025225-266
294-467
AnGL30_0066141-247
273-425
AnGL30_0110649-238
277-428
AnGL30_0113247-238
262-445
AnGL30_0119627-211
233-425
AnGL30_0141624-203
225-403
AnGL30_0165998-282
AnGL30_017131112-1288
1308-1479
AnGL30_018741073-1273
1303-1478
FD_SO4_37_1, AnGL2 AnGL2_0124084-316
344-520
AnGL2_0138626-219
245-434
AnGL2_0180157-238
269-444
AnGL2_0209766-257
287-448
AnGL2_0218060-249
277-455
AnGL2_0249327-212
235-414
AnGL2_0275325-205
232-399
AnGL2_0305932-261
291-478
AnGL2_0312029-208
241-425
FD_YE_25_21, AnGL21 AnGL21_0400769-251
282-459
AnGL21_0151123-209
229-407
AnGL21_0151423-205
229-410
AnGL21_0161157-280
301-482
AnGL21_0170365-244
270-450
AnGL21_0270524-210
233-418
AnGL21_0349265-256
288-464
FD_YE_37_3, AnGL26 AnGL26_0023525-220
240-417
AnGL26_0053428-205
232-412
AnGL26_0081560-246
273-453
AnGL26_0127044-229
251-441
AnGL26_01352122-265
289-470
AnGL26_0147428-223
254-430
AnGL26_0158026-216
245-428
AnGL26_0164163-252
277-459
AnGL26_0169629-264
342-470
AnGL26_0180129-221
248-431
AnGL26_0184330-232
266-446
AnGL26_0196628-234
262-437
AnGL26_0214724-203
234-406
AnGL26_0244133-279
306-486
AnGL26_0349840-217
239-405
FD_YE_37_8_2, AnGL3 AnGL3_0051231-214
244-425
AnGL3_009501167-1342
1389-1539
AnGL3_0100124-219
252-411
AnGL3_01275121-266
288-476
AnGL3_0194128-237
268-449
AnGL3_0217763-246
274-453
AnGL3_0224426-209
236-423
AnGL3_0230231-222
252-430
AnGL3_0242025-203
226-414
AnGL3_0255428-277
305-484
AnGL3_0304826-218
253-428
AnGL3_0307025-216
250-423
AnGL3_0310928-263
284-468
AnGL3_036351076-1254
1291-1446
FD_YE_37_9_2, AnGL4 AnGL4_01065105-202
267-370
Syntrophus buswellii, Sbus Sbus_0070953-233
255-441
Sbus_0083879-265
294-475
Sbus_0113239-239
263-450
Sbus_0127257-250
276-457
Sbus_0138366-251
274-454
Sbus_0286570-261
290-468
Sbus_0287664-252
281-460
Syntrophomonas curvata, Scurva Scurva_00249252-357
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01500137-233
294-387
Syntrophomonas wolfei methylbutyratica, Swm Swm_00143105-213
268-365
FD-25-21, AnGL21 AnGL21_0358725-207
232-419
AnGL21_0015531-222
247-436
AnGL21_0066464-248
277-454
AnGL21_0106939-222
254-431
AnGL21_0203767-244
274-450
AnGL21_0226926-208
233-419
AnGL21_0230460-262
286-452
Sunxiuqinia elliptica, AnGL22 AnGL22_0023625-220
240-417
AnGL22_0053528-205
232-412
AnGL22_0081660-246
273-453
AnGL22_0127244-229
251-441
AnGL22_01354122-265
289-470
AnGL22_0147628-223
254-430
AnGL22_0158226-216
245-428
AnGL22_0163863-252
277-459
AnGL22_0169329-264
342-470
AnGL22_0179829-221
248-431
AnGL22_0184030-232
266-446
AnGL22_0196328-234
262-437
AnGL22_0214424-203
234-406
AnGL22_0243833-279
306-486
AnGL22_0349340-217
239-405
FD-MS-7-8, AnGL9 AnGL9_0008758-247
274-453
AnGL9_0023030-218
241-425
AnGL9_0035326-210
249-428
AnGL9_0063925-205
230-399
AnGL9_0076330-257
281-468
AnGL9_0086426-210
233-413
AnGL9_0185482-327
355-530
AnGL9_0272127-203
235-407
AnGL9_0272757-238
266-444
AnGL9_0297966-257
285-451
FD-YE-37-9-3, AnGL29 AnGL29_01790105-202
267-370
Methylobacterium radiotolerans, GTSA1 PaGL#34_00041114-308
334-517
PaGL#34_00459310-495
PaGL#34_0153720-197
229-411
PaGL#34_0401486-280
306-489
PaGL#34_0445277-272
296-497
PaGL#34_0476090-272
300-479
PaGL#34_0587811-281
310-484
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0015830-235
266-446
PaGL#35_0053429-223
244-432
PaGL#35_0080634-206
232-405
PaGL#35_0108146-241
263-451
PaGL#35_0234931-224
256-438
PaGL#35_0245351-248
270-458
PaGL#35_0262129-237
271-445
PaGL#35_026371074-1249
1276-1455
PaGL#35_0265221-195
226-395
PaGL#35_0311732-215
241-417
PaGL#35_0319264-258
283-467
PaGL#35_0346535-219
PaGL#35_0354638-229
254-467
PaGL#35_036781076-1250
1274-1460
PaGL#35_0383663-260
288-469
PaGL#35_0394432-233
275-424
PaGL#35_0404642-239
263-439
PaGL#35_0405842-238
280-449
PaGL#35_0421861-257
286-466
PaGL#35_0442228-228
259-437
PaGL#35_0450227-216
PaGL#35_0460164-256
282-464
PaGL#35_0480428-263
306-471
PaGL#35_0513547-242
273-452
PaGL#35_0557830-236
263-448
PaGL#35_0614933-224
251-464
PaGL#35_0618665-270
296-478
PaGL#35_0642237-227
254-433
Syntrophomonas erecta, GB-438 Ga0610585_02072137-233
294-383
Variovorax sp., EBFNA2 PaGL#33_0628971-263
293-463
PaGL#33_0059663-260
291-459
PaGL#33_0079366-258
288-466
PaGL#33_0150668-259
288-469
PaGL#33_01900725-919
944-1127
PaGL#33_0200926-220
244-430
PaGL#33_0271364-262
289-473
PaGL#33_0280482-270
295-477
PaGL#33_0322872-255
288-463
PaGL#33_0342627-241
267-440
PaGL#33_0409372-264
295-472
PaGL#33_0416649-222
247-431
PaGL#33_0422978-264
289-471
PaGL#33_0434195-268
PaGL#33_0439830-224
247-434
PaGL#33_0520068-246
272-453
PaGL#33_0552863-254
285-465
PaGL#33_0572663-253
283-462
Variovorax paradoxus, 2u118 PaGL#32_0545235-218
248-413
PaGL#32_0567275-266
297-479
PaGL#32_0580526-212
236-400
PaGL#32_0592966-260
288-462
PaGL#32_0636171-243
271-447
PaGL#32_0645845-220
243-415
PaGL#32_0172250-258
299-477
PaGL#32_0210625-219
242-429
PaGL#32_0270455-174
262-447
PaGL#32_0301774-262
287-469
PaGL#32_0309965-265
292-476
PaGL#32_0359472-264
295-472
PaGL#32_0366748-221
250-426
PaGL#32_0371280-265
290-472
PaGL#32_0382530-224
247-434
PaGL#32_04350725-918
944-1127
PaGL#32_0449565-242
266-447
PaGL#32_0480162-253
284-464
Maridesulfovibrio salexigens, AnGL23 AnGL23_0017062-253
283-457
AnGL23_0036650-227
253-426
AnGL23_0059163-252
273-465
AnGL23_00999102-283
305-482
AnGL23_0112869-269
296-476
AnGL23_0352650-212
249-436
AnGL23_0357148-291
316-508
Variovorax paradoxus, SPNA7 PaGL#43_0550335-218
248-413
PaGL#43_0566275-266
297-479
PaGL#43_0579426-212
233-400
PaGL#43_0630971-243
272-447
PaGL#43_0640745-221
244-416
PaGL#43_0652372-241
282-465
PaGL#43_0171050-258
299-477
PaGL#43_0200666-260
288-459
PaGL#43_0221625-219
242-429
PaGL#43_0307074-262
287-469
PaGL#43_0315265-265
292-476
PaGL#43_0363372-264
295-472
PaGL#43_0370748-219
250-424
PaGL#43_0375380-265
290-472
PaGL#43_0386930-224
247-434
PaGL#43_0388150-236
261-442
PaGL#43_04516725-918
944-1127
PaGL#43_0466365-242
266-447
PaGL#43_0498062-253
284-464
Methylorubrum populi, CTY4 PaGL#39_0016969-270
302-481
PaGL#39_0222595-277
304-484
PaGL#39_046251-180
208-385
Syntrophomonas wolfei, saponavida Swsap_01585104-200
268-363
Sphingomonas sp., CR2A3 PaGL#62_0047869-260
291-447
PaGL#62_0050266-262
287-469
PaGL#62_0051567-263
292-464
PaGL#62_0088051-236
255-449
PaGL#62_0183561-251
281-461
PaGL#62_0216462-262
290-470
PaGL#62_0280152-247
274-457
PaGL#62_03171109-304
336-513
PaGL#62_0334359-249
279-458
MPOB, Sfum 639701203:Sfum_0045970-275
305-485
639701524:Sfum_0079234-214
246-425
639701842:Sfum_0111656-249
272-456
639701850:Sfum_0112458-245
275-454
639702224:Sfum_0150463-254
278-462
639702756:Sfum_0204954-252
279-467
Sfum_0229562-234
271-449
639703201:Sfum_0250451-232
253-433
639703583:Sfum_0288783-279
311-490
639703887:Sfum_0319437-242
265-457
639704150:Sfum_0346376-277
305-487
639704451:Sfum_0376770-258
286-465
639704696:Sfum_0401698-291
321-508
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_0090494-196
250-354
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11147:Swol_00143106-201
245-363
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_10592:Szehn_00504258-356
Syntrophus aciditrophicus, SB 637859085:SYN_0072658-250
276-457
637859470:SYN_0107538-238
260-449
637860122:SYN_0170036-224
248-427
637860855:SYN_0237078-264
294-474
637861184:SYN_0266048-247
269-452
637861496:SYN_0294870-261
288-468
Syntrophus gentianae, DSM8423 Ga0074853_1038:Sgen_0043378-264
293-474
Ga0074853_10716:Sgen_0118039-238
260-449
Ga0074853_10521:Sgen_0084157-250
276-457
Ga0074853_12526:Sgen_0264841-226
248-434
Sgen_006864-108
136-316
Ga0074853_10758:Sgen_0121957-250
273-457
Ga0074853_10864:Sgen_0137134-219
240-422
Ga0074853_10460:Sgen_0069670-261
290-468
Mucilaginibacter gossypii, cycad 4 PaGL#42_0038631-237
257-450
PaGL#42_0081537-233
255-443
PaGL#42_0114941-225
248-427
PaGL#42_0130265-269
295-477
PaGL#42_0131264-257
283-465
PaGL#42_0146235-229
251-440
PaGL#42_0147125-219
240-414
PaGL#42_0190217-234
261-432
PaGL#42_0197320-225
253-426
PaGL#42_0218528-221
246-459
PaGL#42_0225045-238
276-455
PaGL#42_0234436-220
PaGL#42_0250760-257
284-466
PaGL#42_0261628-263
285-471
PaGL#42_0331826-216
262-412
PaGL#42_0361331-230
256-438
PaGL#42_0421330-236
266-447
PaGL#42_0425045-240
264-450
PaGL#42_0464730-225
246-435
PaGL#42_0496863-259
289-468
PaGL#42_0497761-242
266-453
PaGL#42_0500265-261
285-470
PaGL#42_0533933-224
251-465
PaGL#42_0543421-226
257-439
PaGL#42_0556137-227
253-432

PF13437:HlyD_3. HlyD family secretion protein

Found 177 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516379.1:LOMAGDGF_014745-421
WP_003515923.1:LOMAGDGF_02506228-333
Clostridium acetobutylicum, DSM 1731 WP_010966823.1:FHOCHPCF_03612112-213
WP_010966544.1:FHOCHPCF_03323129-230
Acetivibrio alkalicellulosi, DSM 17461 2510059964:NJMEOJLD_00226227-330
2510060134:NJMEOJLD_00392220-330
2510062000:NJMEOJLD_022087-428
Pseudobacteroides cellulosolvens, DSM 2933 WP_036938168.1:NEIHKHHH_0195510-416
WP_050753603.1:NEIHKHHH_03742142-239
335-434
WP_050753751.1:NEIHKHHH_04762542-632
Ruminococcus albus_7, DSM 20455 WP_013498644.1:HCIAFFOI_0205219-389
Paenibacillus guangzhouensis, KCTC 33171 WP_152393202.1:KDFAKKPF_01807268-360
WP_152394532.1:KDFAKKPF_0335386-198
WP_152395239.1:KDFAKKPF_04170177-259
Clostridium acetobutylicum, ATCC 824 WP_010966544.1:OJAMHIDJ_03333129-230
WP_010966823.1:OJAMHIDJ_03624112-213
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_171003543.1:PROKKA_00099288-385
WP_137697687.1:PROKKA_00410239-315
WP_137697616.1:PROKKA_00681357-461
WP_137698160.1:PROKKA_00899479-597
WP_244648353.1:PROKKA_01358138-235
333-437
WP_137696302.1:PROKKA_017184-416
WP_137697904.1:PROKKA_02459252-356
WP_137696941.1:PROKKA_02982238-345
FD_25_22, AnGL7 AnGL7_00331140-233
AnGL7_00332323-429
AnGL7_00570195-302
AnGL7_00765449-554
AnGL7_00836157-254
AnGL7_00837161-259
AnGL7_01330185-290
AnGL7_02508307-404
AnGL7_02797194-297
FD_25_27, AnGL8 AnGL8_00328277-382
AnGL8_01425205-310
AnGL8_00462334-441
AnGL8_00491184-292
AnGL8_00944297-398
AnGL8_02311210-323
FD_MS_7_1, AnGL28 AnGL28_03362124-219
FD_SO4_25_1_F22, AnGL30 AnGL30_01105190-296
AnGL30_01194189-283
FD_SO4_37_1, AnGL2 AnGL2_02492124-219
FD_YE_25_21, AnGL21 AnGL21_03335261-381
AnGL21_03891315-430
AnGL21_04325161-262
AnGL21_04326157-262
AnGL21_01702204-314
AnGL21_01845156-254
AnGL21_03491246-334
FD_YE_37_3, AnGL26 AnGL26_00088182-274
AnGL26_01136290-388
AnGL26_01272194-284
AnGL26_01800235-331
FD_YE_37_8_2, AnGL3 AnGL3_01000180-262
AnGL3_02246191-283
FD_YE_37_9_2, AnGL4 AnGL4_01988253-332
AnGL4_02063265-369
AnGL4_02235265-347
AnGL4_02294229-320
AnGL4_02670243-342
AnGL4_0342911-351
Syntrophus buswellii, Sbus Sbus_00707303-406
Sbus_02877214-320
Terrisporobacter hibernicus, AnGL54 AnGL54_00755199-311
AnGL54_021791-114
122-350
FD-25-21, AnGL21 AnGL21_00154307-404
AnGL21_00580205-310
AnGL21_01239185-290
AnGL21_01761161-259
AnGL21_01762157-254
AnGL21_01834449-554
AnGL21_02036196-301
AnGL21_02303140-233
Sunxiuqinia elliptica, AnGL22 AnGL22_00088182-274
AnGL22_01138290-388
AnGL22_01274194-284
AnGL22_01797235-331
Paraclostridium benzoelyticum, AnGL27 AnGL27_01478225-333
AnGL27_01697156-234
AnGL27_032694-402
FD-MS-7-8, AnGL9 AnGL9_00088189-287
AnGL9_00865124-214
AnGL9_01855297-411
AnGL9_02722122-215
FD-YE-37-9-3, AnGL29 AnGL29_0068711-351
AnGL29_02713253-332
AnGL29_02788265-369
AnGL29_02960265-347
AnGL29_03019229-320
AnGL29_03395243-342
Methylobacterium radiotolerans, GTSA1 PaGL#34_06421305-409
PaGL#34_06564293-402
PaGL#34_00608264-348
PaGL#34_00650186-263
PaGL#34_01881256-370
PaGL#34_02664156-238
PaGL#34_03761264-385
PaGL#34_03939293-395
PaGL#34_04454205-324
PaGL#34_05232164-243
PaGL#34_05248286-373
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01080219-340
PaGL#35_02452218-340
PaGL#35_03516232-317
PaGL#35_03943120-208
PaGL#35_04501180-283
PaGL#35_04805233-328
PaGL#35_05811239-341
Variovorax sp., EBFNA2 PaGL#33_06533202-299
PaGL#33_00792162-246
PaGL#33_01898297-384
PaGL#33_02010308-410
PaGL#33_04233221-323
PaGL#33_05201287-388
Variovorax paradoxus, 2u118 PaGL#32_05454260-366
PaGL#32_01726209-321
PaGL#32_02105308-410
PaGL#32_03715212-314
PaGL#32_04352281-368
PaGL#32_04496288-392
Maridesulfovibrio salexigens, AnGL23 AnGL23_00171195-304
AnGL23_00368281-382
AnGL23_00866202-313
AnGL23_00995279-391
AnGL23_03287167-260
AnGL23_03548316-432
Priestia megaterium, 10L1 PaGL#57_0593486-198
PaGL#57_0651284-201
Variovorax paradoxus, SPNA7 PaGL#43_05505260-366
PaGL#43_06106202-301
PaGL#43_01714209-321
PaGL#43_02215308-410
PaGL#43_03756212-314
PaGL#43_04518302-389
PaGL#43_04664288-392
Methylorubrum populi, CTY4 PaGL#39_00109156-242
PaGL#39_00167255-336
PaGL#39_01098196-298
PaGL#39_01173264-343
PaGL#39_02449306-413
PaGL#39_03536277-359
PaGL#39_03540308-410
PaGL#39_03577299-401
PaGL#39_03760215-320
PaGL#39_03946263-352
PaGL#39_04681195-270
Fictibacillus phosphorivorans, TY7 PaGL#38_01956183-270
Bacillus subtilis, 30VD-1 PaGL#66_0326284-201
Peribacillus frigoritolerans, 30N-5 PaGL#67_0034196-192
PaGL#67_0490386-202
PaGL#67_05416205-305
Micromonospora inositola, Utrum1 PaGL#61_06559286-369
Sphingomonas sp., CR2A3 PaGL#62_00278235-327
PaGL#62_00479254-371
PaGL#62_00505194-296
PaGL#62_01446246-335
PaGL#62_02797208-317
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_029821-114
122-350
Niallia taxi, AG-1 PaGL#37_00599105-203
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_00777148-260
Syntrophomonas zehnderi, OL-4 Szehn Szehn_01435109-292
Syntrophus aciditrophicus, SB SYN_01424205-302
637861503:SYN_02955215-321
Syntrophus gentianae, DSM8423 Ga0074853_12528:Sgen_02650295-398
Sgen_0096685-158
Mucilaginibacter gossypii, cycad 4 PaGL#42_01470192-296
PaGL#42_02212232-317
PaGL#42_02619233-329
PaGL#42_04249220-341
Ruminococcus callidus, ATCC 27760 Rcal_00845184-292
Rcal_00847402-502
Rcal_012055-421
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