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PROKKA_03308 Locus tags: • Sequence Length: 248

Ruminiclostridium herbifermentans MA18, DSM 109966 GCF_005473905.2

5050100100150150200200250250
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PROKKA_03303 unknown PROKKA_03305 unknown PROKKA_03308 PROKKA_03310 PROKKA_03312 PROKKA_03313 
    [PF01520]_[PF05036]

    [21:PF01520]_[199:PF05036]

    [2:IPR036505]_[9:IPR002502]_[21:IPR002502]_[21:IPR002502]_[194:IPR036680]_[196:IPR007730]_[199:IPR007730]

Looking for similar signatures in the working genomes

PF01520:Amidase_3. N-acetylmuramoyl-L-alanine amidase

Found 245 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003515313.1:LOMAGDGF_0038428-174
WP_003515629.1:LOMAGDGF_0122184-260
WP_003515588.1:LOMAGDGF_01242169-343
WP_003512264.1:LOMAGDGF_02118767-941
WP_003520686.1:LOMAGDGF_0245220-149
WP_003515830.1:LOMAGDGF_0254946-234
Clostridium acetobutylicum, DSM 1731 WP_010966373.1:FHOCHPCF_0313840-225
Acetivibrio alkalicellulosi, DSM 17461 2510060540:NJMEOJLD_0078785-261
2510060563:NJMEOJLD_008111202-1340
2510061487:NJMEOJLD_01711855-982
2510062094:NJMEOJLD_0230128-176
2510062535:NJMEOJLD_02734757-930
2510062954:NJMEOJLD_0314046-234
Pseudobacteroides cellulosolvens, DSM 2933 WP_050752939.1:NEIHKHHH_001106-185
WP_081927308.1:NEIHKHHH_0027625-171
WP_050752987.1:NEIHKHHH_0035076-251
WP_036943979.1:NEIHKHHH_00563164-333
WP_050753128.1:NEIHKHHH_0105637-224
WP_050753327.1:NEIHKHHH_02030800-973
WP_036944037.1:NEIHKHHH_0279244-232
WP_050753578.1:NEIHKHHH_03571554-727
WP_036937310.1:NEIHKHHH_043426-172
WP_050753864.1:NEIHKHHH_0536944-231
Ruminococcus albus_7, DSM 20455 WP_013497999.1:HCIAFFOI_0135750-235
WP_013498517.1:HCIAFFOI_0191699-277
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11139:GJLLLGJL_00135714-896
GJLLLGJL_0108826-156
Ga0065332_112456:GJLLLGJL_0241050-234
Paenibacillus guangzhouensis, KCTC 33171 WP_227793495.1:KDFAKKPF_01734281-412
WP_152393747.1:KDFAKKPF_024444-188
WP_227793566.1:KDFAKKPF_02592327-497
WP_152393880.1:KDFAKKPF_02593326-496
WP_152394336.1:KDFAKKPF_0312543-226
WP_227793257.1:KDFAKKPF_0375048-219
WP_152395397.1:KDFAKKPF_0437758-244
Clostridium acetobutylicum, ATCC 824 WP_010966373.1:OJAMHIDJ_0314740-225
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_244648318.1:PROKKA_00469112-314
WP_137697527.1:PROKKA_0057758-227
WP_137697572.1:PROKKA_0063154-242
WP_244648358.1:PROKKA_01495425-600
WP_137698850.1:PROKKA_02691822-997
WP_009052873.1:PROKKA_0306821-164
WP_137699002.1:PROKKA_0330821-164
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0083921-150
OINOEOOJ_0168923-165
OINOEOOJ_0176820-152
OINOEOOJ_0192621-163
OINOEOOJ_02079642-820
OINOEOOJ_0242349-233
FD_25_22, AnGL7 AnGL7_0301630-167
AnGL7_03230161-379
FD_25_27, AnGL8 AnGL8_01490161-379
AnGL8_0286928-170
FD_MS_7_1, AnGL28 AnGL28_01168120-312
FD_SO4_25_1_F22, AnGL30 AnGL30_0027435-253
FD_SO4_37_1, AnGL2 AnGL2_00298120-312
FD_YE_25_21, AnGL21 AnGL21_00242169-389
AnGL21_0261427-168
FD_YE_37_3, AnGL26 AnGL26_00971125-334
AnGL26_0404723-156
AnGL26_0429933-252
FD_YE_37_8_2, AnGL3 AnGL3_020223-201
AnGL3_02862108-315
AnGL3_0364337-256
FD_YE_37_9_2, AnGL4 AnGL4_00234537-717
AnGL4_00941580-756
Syntrophus buswellii, Sbus Sbus_00726149-365
Sbus_0164847-241
Syntrophomonas curvata, Scurva Scurva_00218620-802
Scurva_0237917-149
Scurva_0276435-219
Scurva_0297418-148
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0017321-149
Sespor_0109449-233
Sespor_012623-124
Sespor_01493642-820
Sespor_016025-169
Sespor_0170221-164
Sespor_0186920-152
Sespor_0194723-165
Syntrophomonas wolfei methylbutyratica, Swm Swm_00135710-892
Swm_002735-170
Swm_0084632-151
Swm_0279350-233
Terrisporobacter hibernicus, AnGL54 AnGL54_0480638-157
AnGL54_0437391-263
AnGL54_000946-206
AnGL54_0082038-157
AnGL54_0101738-157
AnGL54_012296-206
AnGL54_014986-206
AnGL54_0174857-256
AnGL54_0283364-263
AnGL54_0332742-230
FD-25-21, AnGL21 AnGL21_03019161-379
AnGL21_0321030-167
Sunxiuqinia elliptica, AnGL22 AnGL22_00972125-334
AnGL22_0404323-156
AnGL22_0429533-252
Paraclostridium benzoelyticum, AnGL27 AnGL27_003864-173
AnGL27_036674-173
AnGL27_0078641-229
AnGL27_014884-169
AnGL27_0170632-199
AnGL27_019894-170
AnGL27_022383-169
AnGL27_02699137-306
AnGL27_0333880-252
AnGL27_03348623-800
AnGL27_0340461-260
FD-MS-7-8, AnGL9 AnGL9_01424120-312
FD-YE-37-9-3, AnGL29 AnGL29_00959537-717
AnGL29_01666580-756
Methylobacterium radiotolerans, GTSA1 PaGL#34_0222625-152
PaGL#34_04802177-393
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0053771-196
PaGL#35_0274826-246
PaGL#35_0341255-300
PaGL#35_0381325-177
PaGL#35_0544744-268
Syntrophomonas erecta, GB-438 Ga0610585_0083921-150
Ga0610585_0168923-165
Ga0610585_0176820-152
Ga0610585_0192621-163
Ga0610585_02079642-820
Ga0610585_0242349-233
Variovorax sp., EBFNA2 PaGL#33_0087841-179
PaGL#33_0238948-181
PaGL#33_04049261-482
Variovorax paradoxus, 2u118 PaGL#32_0089637-176
PaGL#32_0215829-192
PaGL#32_0340929-203
PaGL#32_03566283-504
Dietzia cinnamea, 55 PaGL#56_00304301-452
PaGL#56_00405178-336
PaGL#56_03363189-367
Maridesulfovibrio salexigens, AnGL23 AnGL23_03511366-574
Exiguobacterium mexicanum, AnGL24 AnGL24_00531256-435
AnGL24_02071527-701
Clostridium subterminale, CB-LS10-1 AnGL53_002308-175
AnGL53_016113-175
AnGL53_02440157-331
AnGL53_0331359-244
Priestia megaterium, 10L1 PaGL#57_0209141-226
PaGL#57_00420258-431
PaGL#57_01244414-605
PaGL#57_02922120-287
PaGL#57_034513-176
PaGL#57_043163-176
PaGL#57_04418407-576
PaGL#57_05395322-452
PaGL#57_053983-176
PaGL#57_0637284-284
Variovorax paradoxus, SPNA7 PaGL#43_0088737-176
PaGL#43_0241829-192
PaGL#43_03604282-503
PaGL#43_0362349-223
Geodermatophilus sp., RDM14 PaGL#36_00116199-373
PaGL#36_00143200-357
PaGL#36_0042451-258
PaGL#36_0042565-218
Methylorubrum populi, CTY4 PaGL#39_0076026-152
PaGL#39_03283198-413
Fictibacillus phosphorivorans, TY7 PaGL#38_00083257-426
PaGL#38_0055842-226
PaGL#38_01693149-305
PaGL#38_01867365-535
PaGL#38_0194125-143
PaGL#38_028973-172
PaGL#38_0297415-148
PaGL#38_036983-171
PaGL#38_04220293-466
Syntrophomonas wolfei, saponavida Swsap_0093050-234
Swsap_01304598-776
Swsap_019212-172
Swsap_022520-125
Swsap_03181368-552
Bacillus subtilis, 30VD-1 PaGL#66_0001542-226
PaGL#66_00741321-490
PaGL#66_01585345-514
PaGL#66_0171822-141
PaGL#66_0187329-199
PaGL#66_023883-172
PaGL#66_0286122-140
PaGL#66_0290023-142
Peribacillus frigoritolerans, 30N-5 PaGL#67_0009942-226
PaGL#67_02022417-585
PaGL#67_036673-171
PaGL#67_049804-115
Micromonospora inositola, Utrum1 PaGL#61_00194175-355
PaGL#61_00297298-427
PaGL#61_0408668-205
PaGL#61_0451267-205
PaGL#61_0477366-205
Sphingomonas sp., CR2A3 PaGL#62_0022819-147
PaGL#62_02963190-404
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_040026-206
AnGL54_0016328-216
AnGL54_0120291-263
AnGL54_0155038-157
AnGL54_0174538-157
AnGL54_019576-206
AnGL54_0217538-157
AnGL54_023056-206
AnGL54_0255257-256
AnGL54_0363664-263
Niallia taxi, AG-1 PaGL#37_0017846-230
PaGL#37_020013-176
PaGL#37_027663-172
PaGL#37_02812339-507
MPOB, Sfum 639701491:Sfum_00757256-468
639704537:Sfum_03860138-269
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_0201447-229
Spalm_0171017-149
Spalm_01449412-590
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11139:Swol_00135714-896
Swol_0108826-156
Ga0065332_112456:Swol_0241050-234
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1289:Szehn_016684-170
Ga0124040_13918:Szehn_0224420-149
Ga0124040_12118:Szehn_01168232-410
Ga0124040_10576:Szehn_00488623-801
Ga0124040_127179:Szehn_0163820-152
Ga0124040_11888:Szehn_0032650-235
Ga0124040_11848:Szehn_0036621-171
Syntrophus aciditrophicus, SB 637859410:SYN_01024163-379
637859941:SYN_015270-193
Syntrophus gentianae, DSM8423 Ga0074853_1229:Sgen_02497164-380
Sgen_0270021-215
Mucilaginibacter gossypii, cycad 4 PaGL#42_00972301-473
PaGL#42_0127853-299
PaGL#42_0297755-275
PaGL#42_0327437-261
PaGL#42_0463995-220
Ruminococcus callidus, ATCC 27760 Rcal_0027281-231
Rcal_0039051-238
Rcal_0134222-150
Rcal_013625-105
Rcal_0149840-156
Rcal_0165740-156
Rcal_0180540-156
Rcal_0181740-156
Rcal_0199618-160
Rcal_02476352-530
Rcal_0248717-136

PF05036:SPOR. SPOR domain

Found 102 similar signatures
Paenibacillus guangzhouensis, KCTC 33171 WP_193726712.1:KDFAKKPF_00109215-280
WP_193726714.1:KDFAKKPF_00136183-244
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_009052873.1:PROKKA_03068196-228
WP_137699002.1:PROKKA_03308199-232
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00839196-227
OINOEOOJ_01689291-324
OINOEOOJ_01926176-230
FD_25_22, AnGL7 AnGL7_00049107-176
AnGL7_00986187-256
AnGL7_01783116-186
AnGL7_02965649-720
FD_25_27, AnGL8 AnGL8_0012163-132
AnGL8_01714197-271
AnGL8_02497105-169
AnGL8_03049106-175
FD_SO4_25_1_F22, AnGL30 AnGL30_0151282-157
AnGL30_0169183-149
AnGL30_02229305-367
FD_YE_25_21, AnGL21 AnGL21_0004764-125
AnGL21_0004866-139
AnGL21_00210405-479
AnGL21_0223398-167
AnGL21_02410186-257
AnGL21_02914105-175
AnGL21_03202107-179
FD_YE_37_3, AnGL26 AnGL26_0142578-142
AnGL26_0189593-154
AnGL26_0207661-133
AnGL26_02164231-296
FD_YE_37_8_2, AnGL3 AnGL3_01172153-228
AnGL3_0131769-143
AnGL3_01818288-330
AnGL3_0198663-126
AnGL3_0351295-158
Syntrophus buswellii, Sbus Sbus_01018237-313
Sbus_0147162-125
Sbus_01738362-423
Sbus_0196734-76
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00173196-228
Sespor_01702176-230
Sespor_01947286-324
FD-25-21, AnGL21 AnGL21_00806116-186
AnGL21_01566187-256
AnGL21_02571107-176
AnGL21_03260674-745
Sunxiuqinia elliptica, AnGL22 AnGL22_0142778-142
AnGL22_0189293-154
AnGL22_0207361-133
AnGL22_02161231-296
Methylobacterium radiotolerans, GTSA1 PaGL#34_00964408-487
PaGL#34_00985235-317
PaGL#34_03019380-457
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0634768-139
Syntrophomonas erecta, GB-438 Ga0610585_00839196-227
Ga0610585_01689291-324
Ga0610585_01926176-230
Variovorax sp., EBFNA2 PaGL#33_00507173-245
PaGL#33_04579215-284
PaGL#33_05932294-369
Variovorax paradoxus, 2u118 PaGL#32_00497167-239
PaGL#32_03865218-285
PaGL#32_05139311-386
Dietzia cinnamea, 55 PaGL#56_0118111-46
Maridesulfovibrio salexigens, AnGL23 AnGL23_0053030-92
AnGL23_02539160-233
AnGL23_03357212-284
AnGL23_03397161-224
AnGL23_03516533-595
Clostridium subterminale, CB-LS10-1 AnGL53_0118691-139
Priestia megaterium, 10L1 PaGL#57_02879180-247
Variovorax paradoxus, SPNA7 PaGL#43_00474166-238
PaGL#43_03912218-291
PaGL#43_05341311-386
Methylorubrum populi, CTY4 PaGL#39_01670224-305
PaGL#39_03100403-480
PaGL#39_04728413-492
Fictibacillus phosphorivorans, TY7 PaGL#38_01941183-215
PaGL#38_02897193-259
Bacillus subtilis, 30VD-1 PaGL#66_01537178-233
PaGL#66_02388182-252
Peribacillus frigoritolerans, 30N-5 PaGL#67_0325781-158
Sphingomonas sp., CR2A3 PaGL#62_00118239-298
PaGL#62_00121350-428
PaGL#62_00921326-388
PaGL#62_01312164-240
PaGL#62_01319498-573
Niallia taxi, AG-1 PaGL#37_02766186-254
MPOB, Sfum 639701316:Sfum_00576180-257
639701937:Sfum_01215222-296
639704072:Sfum_03383178-251
639704825:Sfum_04148459-528
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_11848:Szehn_00366181-237
Syntrophus aciditrophicus, SB 637859628:SYN_0122664-127
637859648:SYN_0124544-109
637859894:SYN_01485363-432
637860678:SYN_02220286-363
Syntrophus gentianae, DSM8423 Ga0074853_11232:Sgen_01796365-426
Ga0074853_11148:Sgen_0170762-126
Ga0074853_11752:Sgen_02221239-315
Ga0074853_11167:Sgen_0172641-109
Mucilaginibacter gossypii, cycad 4 PaGL#42_03050274-339
PaGL#42_0580668-138
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