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PROKKA_03345 Locus tags: • Sequence Length: 329

Ruminiclostridium herbifermentans MA18, DSM 109966 GCF_005473905.2

5050100100150150200200250250300300350350
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PROKKA_03340 PROKKA_03341 unknown unknown PROKKA_03345 PROKKA_03346 PROKKA_03348 PROKKA_03349 PROKKA_03350 
    [PF07508]_[PF13408]

    [22:PF07508]_[119:PF13408]

    [6:IPR011109]_[22:IPR011109]_[119:IPR025827]

Looking for similar signatures in the working genomes

PF07508:Recombinase. Recombinase

Found 190 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518524.1:LOMAGDGF_00502185-309
LOMAGDGF_01000140-245
WP_003519449.1:LOMAGDGF_01696192-297
WP_003520694.1:LOMAGDGF_02448199-307
WP_003520690.1:LOMAGDGF_02450190-296
Clostridium acetobutylicum, DSM 1731 WP_010964541.1:FHOCHPCF_01284181-304
WP_010965170.1:FHOCHPCF_01907184-308
WP_010965254.1:FHOCHPCF_01997183-316
WP_010965259.1:FHOCHPCF_02003183-309
WP_010965545.1:FHOCHPCF_02285179-296
Acetivibrio alkalicellulosi, DSM 17461 2510059973:NJMEOJLD_0023554-163
2510060744:NJMEOJLD_00985172-281
2510060766:NJMEOJLD_01007202-311
2510063713:NJMEOJLD_03891186-291
2510063871:NJMEOJLD_04046181-305
Pseudobacteroides cellulosolvens, DSM 2933 NEIHKHHH_0000358-96
NEIHKHHH_0000422-91
WP_035269295.1:NEIHKHHH_00005191-313
WP_036939291.1:NEIHKHHH_00025187-307
WP_036939293.1:NEIHKHHH_00028191-291
WP_036939296.1:NEIHKHHH_00029213-309
WP_242853091.1:NEIHKHHH_00045203-311
WP_036939363.1:NEIHKHHH_00064181-290
WP_050752948.1:NEIHKHHH_00141185-318
WP_036939516.1:NEIHKHHH_00145181-292
WP_036946462.1:NEIHKHHH_00463164-258
WP_081927382.1:NEIHKHHH_02094115-223
WP_050753349.1:NEIHKHHH_02163177-297
WP_050753478.1:NEIHKHHH_03009202-321
WP_028308464.1:NEIHKHHH_03010190-308
WP_036937324.1:NEIHKHHH_04334200-309
WP_036937322.1:NEIHKHHH_04335188-296
WP_050753760.1:NEIHKHHH_04818197-304
Ruminococcus albus_7, DSM 20455 HCIAFFOI_035767-83
WP_013483463.1:HCIAFFOI_03580175-240
WP_242837763.1:HCIAFFOI_03634188-315
WP_013483611.1:HCIAFFOI_03735189-322
WP_013483758.1:HCIAFFOI_03890187-277
WP_013483789.1:HCIAFFOI_03929190-294
WP_013483791.1:HCIAFFOI_03931202-311
WP_013483873.1:HCIAFFOI_04025187-289
WP_013483874.1:HCIAFFOI_04026199-308
WP_013483878.1:HCIAFFOI_04030202-311
WP_013483879.1:HCIAFFOI_0403122-78
WP_013483880.1:HCIAFFOI_04032190-295
WP_242843397.1:HCIAFFOI_00561190-322
WP_013497908.1:HCIAFFOI_01261177-297
WP_013498148.1:HCIAFFOI_01530178-297
WP_013498924.1:HCIAFFOI_02372183-304
WP_013499431.1:HCIAFFOI_02942177-298
WP_013499509.1:HCIAFFOI_03022178-298
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111553:GJLLLGJL_015221-70
Ga0065332_111565:GJLLLGJL_01534188-312
Paenibacillus guangzhouensis, KCTC 33171 WP_152394703.1:KDFAKKPF_03551180-297
Clostridium acetobutylicum, ATCC 824 WP_010964541.1:OJAMHIDJ_01287181-304
WP_010965170.1:OJAMHIDJ_01915184-308
WP_010965254.1:OJAMHIDJ_02005183-316
WP_010965259.1:OJAMHIDJ_02011183-309
WP_010965545.1:OJAMHIDJ_02294179-296
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696471.1:PROKKA_01530182-294
WP_137699291.1:PROKKA_02326181-303
WP_137697866.1:PROKKA_02501172-282
WP_137697859.1:PROKKA_02506188-301
WP_137697849.1:PROKKA_02516198-307
WP_137697021.1:PROKKA_03064200-306
WP_137697023.1:PROKKA_03066190-296
WP_137699136.1:PROKKA_03126198-306
WP_137699202.1:PROKKA_0322320-95
WP_190530372.1:PROKKA_03248171-280
WP_190530374.1:PROKKA_03249188-296
WP_190530376.1:PROKKA_03272172-280
WP_190530378.1:PROKKA_03273188-296
WP_137699000.1:PROKKA_03310192-296
PROKKA_033132-87
WP_171003647.1:PROKKA_0334522-100
WP_137698972.1:PROKKA_03346195-302
WP_244648269.1:PROKKA_03348182-291
WP_244648270.1:PROKKA_03349189-296
WP_190530390.1:PROKKA_03363172-280
WP_190530392.1:PROKKA_03364188-296
PROKKA_03222150-257
PROKKA_0333278-185
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00669196-318
OINOEOOJ_00841190-296
OINOEOOJ_00843200-306
OINOEOOJ_0168373-182
OINOEOOJ_01684202-306
818-927
OINOEOOJ_01685208-317
OINOEOOJ_0168613-50
OINOEOOJ_01922199-307
OINOEOOJ_01923188-296
FD_25_22, AnGL7 AnGL7_01155217-309
FD_YE_25_21, AnGL21 AnGL21_01650192-292
AnGL21_01682205-304
FD_YE_37_9_2, AnGL4 AnGL4_02043187-296
Syntrophus buswellii, Sbus Sbus_00100203-297
Sbus_02055176-226
Syntrophomonas curvata, Scurva Scurva_00075174-276
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00169200-306
Sespor_00171190-296
Sespor_01598200-309
Sespor_01599189-295
Sespor_01705188-296
Sespor_01706199-307
Sespor_01949210-318
Sespor_01950208-317
Sespor_01951202-306
818-927
Sespor_0195273-182
Syntrophomonas wolfei methylbutyratica, Swm Swm_00270200-309
Swm_00271189-295
Swm_00536203-311
Swm_0053738-96
Swm_01957188-313
Terrisporobacter hibernicus, AnGL54 AnGL54_00017180-283
AnGL54_00798180-282
FD-25-21, AnGL21 AnGL21_02163187-282
Paraclostridium benzoelyticum, AnGL27 AnGL27_00154174-250
AnGL27_03671173-247
AnGL27_01464185-308
FD-YE-37-9-3, AnGL29 AnGL29_02768187-296
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_02430179-262
Syntrophomonas erecta, GB-438 Ga0610585_00669196-318
Ga0610585_00841190-296
Ga0610585_00843200-306
Ga0610585_0168373-182
Ga0610585_01684202-306
818-927
Ga0610585_01685208-317
Ga0610585_0168613-50
Ga0610585_01922199-307
Ga0610585_01923188-296
Variovorax sp., EBFNA2 PaGL#33_03312193-280
Clostridium subterminale, CB-LS10-1 AnGL53_00185183-315
Geodermatophilus sp., RDM14 PaGL#36_01518183-260
Fictibacillus phosphorivorans, TY7 PaGL#38_02964190-299
PaGL#38_03171168-285
Syntrophomonas wolfei, saponavida Swsap_01411180-271
Swsap_01412187-291
Swsap_01418179-287
Bacillus subtilis, 30VD-1 PaGL#66_02146182-284
Peribacillus frigoritolerans, 30N-5 PaGL#67_04353195-276
PaGL#67_05333178-269
Micromonospora inositola, Utrum1 PaGL#61_01122190-305
PaGL#61_01689174-256
PaGL#61_05081196-302
PaGL#61_05775192-306
Sphingomonas sp., CR2A3 PaGL#62_01921187-282
PaGL#62_01934217-321
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01528180-282
AnGL54_02247180-283
Niallia taxi, AG-1 PaGL#37_00755171-268
PaGL#37_00820171-259
MPOB, Sfum 639704549:Sfum_03874191-289
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_00326172-258
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111553:Swol_015221-70
Ga0065332_111565:Swol_01534188-312
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1283:Szehn_01662158-266
Ga0124040_1264:Szehn_01240170-260
Ga0124040_1284:Szehn_01663193-297
Szehn_01664201-308
Ga0124040_1286:Szehn_01665189-295
Ga0124040_13913:Szehn_02239199-307
Szehn_02241112-218
Ga0124040_10921:Szehn_00592180-304
Ga0124040_11852:Szehn_00999199-305
Szehn_00364191-296
Ruminococcus callidus, ATCC 27760 Rcal_00004173-304
Rcal_01449191-303
Rcal_01476182-287
Rcal_01485172-278
Rcal_01495197-306
Rcal_01496188-296
Rcal_01647175-290
Rcal_01654197-305
Rcal_01655185-293
Rcal_01711189-298
Rcal_01807189-294
Rcal_01809197-306
Rcal_01813197-306
Rcal_0181419-73
Rcal_01815190-296
Rcal_01875183-296
Rcal_02255559-680
Rcal_02277193-322
Rcal_02288184-302
Rcal_0235161-170
Rcal_0236820-82
Rcal_02369191-297

PF13408:Zn_ribbon_recom. Recombinase zinc beta ribbon domain

Found 147 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518524.1:LOMAGDGF_00502324-386
LOMAGDGF_01000260-317
WP_003519449.1:LOMAGDGF_01696313-370
WP_003520694.1:LOMAGDGF_02448326-387
WP_003520690.1:LOMAGDGF_02450313-373
Clostridium acetobutylicum, DSM 1731 WP_010964418.1:FHOCHPCF_011603-59
WP_010964541.1:FHOCHPCF_01284321-376
WP_010965170.1:FHOCHPCF_01907322-386
WP_010965254.1:FHOCHPCF_01997329-393
WP_010965259.1:FHOCHPCF_02003323-386
WP_010965545.1:FHOCHPCF_02285313-372
Acetivibrio alkalicellulosi, DSM 17461 2510059973:NJMEOJLD_00235182-242
2510059979:NJMEOJLD_0024145-104
2510060766:NJMEOJLD_01007325-386
2510063713:NJMEOJLD_03891305-362
2510063871:NJMEOJLD_04046316-376
Pseudobacteroides cellulosolvens, DSM 2933 NEIHKHHH_00004114-174
WP_036939291.1:NEIHKHHH_00025322-389
WP_036939296.1:NEIHKHHH_00029324-380
WP_242853091.1:NEIHKHHH_00045325-390
WP_050752948.1:NEIHKHHH_00141331-395
WP_036946462.1:NEIHKHHH_00463271-331
WP_050753349.1:NEIHKHHH_02163324-384
WP_050753478.1:NEIHKHHH_03009344-404
WP_028308464.1:NEIHKHHH_03010324-384
WP_036937324.1:NEIHKHHH_04334321-380
WP_036937322.1:NEIHKHHH_04335309-365
WP_050753760.1:NEIHKHHH_04818324-385
Ruminococcus albus_7, DSM 20455 HCIAFFOI_0357694-154
WP_013483611.1:HCIAFFOI_03735335-400
WP_013483758.1:HCIAFFOI_03890295-365
WP_013483789.1:HCIAFFOI_03929307-362
WP_013483791.1:HCIAFFOI_03931333-394
WP_013483874.1:HCIAFFOI_04026326-386
WP_013483878.1:HCIAFFOI_04030333-394
WP_013483880.1:HCIAFFOI_04032307-362
WP_242843397.1:HCIAFFOI_00561335-400
WP_013497908.1:HCIAFFOI_01261309-369
WP_013498148.1:HCIAFFOI_01530309-369
WP_013498924.1:HCIAFFOI_02372316-376
WP_013499431.1:HCIAFFOI_02942309-369
WP_013499509.1:HCIAFFOI_03022309-369
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111565:GJLLLGJL_01534322-383
Paenibacillus guangzhouensis, KCTC 33171 WP_152394703.1:KDFAKKPF_03551309-371
Clostridium acetobutylicum, ATCC 824 WP_010964418.1:OJAMHIDJ_011633-59
WP_010964541.1:OJAMHIDJ_01287321-376
WP_010965170.1:OJAMHIDJ_01915322-386
WP_010965254.1:OJAMHIDJ_02005329-393
WP_010965259.1:OJAMHIDJ_02011323-386
WP_010965545.1:OJAMHIDJ_02294313-372
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696471.1:PROKKA_01530308-364
WP_137699291.1:PROKKA_02326316-382
WP_137697866.1:PROKKA_02501297-363
WP_137697859.1:PROKKA_02506319-387
WP_137697849.1:PROKKA_02516321-393
WP_137697014.1:PROKKA_030558-71
WP_137697021.1:PROKKA_03064328-388
WP_137697023.1:PROKKA_03066314-373
WP_137699136.1:PROKKA_03126326-388
WP_137699202.1:PROKKA_03223118-177
WP_190530372.1:PROKKA_03248299-360
WP_190530374.1:PROKKA_03249313-367
WP_190530376.1:PROKKA_03272299-361
WP_190530378.1:PROKKA_03273313-367
WP_137699000.1:PROKKA_03310313-372
PROKKA_03313109-169
WP_171003647.1:PROKKA_03345119-173
WP_137698972.1:PROKKA_03346320-382
WP_244648269.1:PROKKA_03348310-371
WP_244648270.1:PROKKA_03349313-370
WP_190530390.1:PROKKA_03363299-362
WP_190530392.1:PROKKA_03364313-367
PROKKA_03222286-348
PROKKA_03332214-276
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00669329-389
OINOEOOJ_00841314-373
OINOEOOJ_00843328-388
OINOEOOJ_01685336-403
OINOEOOJ_0168663-117
OINOEOOJ_01922318-378
OINOEOOJ_01923310-365
FD_YE_37_9_2, AnGL4 AnGL4_02043319-375
Syntrophus buswellii, Sbus Sbus_00100311-374
Syntrophomonas curvata, Scurva Scurva_00075291-349
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00169328-388
Sespor_00171314-373
Sespor_01598320-379
Sespor_01599310-365
Sespor_01705310-365
Sespor_01706318-378
Sespor_01949331-385
Sespor_01950336-403
Syntrophomonas wolfei methylbutyratica, Swm Swm_00270320-380
Swm_00271310-365
Swm_00536324-384
Swm_00537111-169
246-281
Swm_01957323-383
Swm_0270515-70
FD-25-21, AnGL21 AnGL21_02163303-360
Paraclostridium benzoelyticum, AnGL27 AnGL27_01464323-380
FD-YE-37-9-3, AnGL29 AnGL29_02768319-375
Syntrophomonas erecta, GB-438 Ga0610585_00669329-389
Ga0610585_00841314-373
Ga0610585_00843328-388
Ga0610585_01685336-403
Ga0610585_0168663-117
Ga0610585_01922318-378
Ga0610585_01923310-365
Clostridium subterminale, CB-LS10-1 AnGL53_00185332-389
AnGL53_0349715-72
Fictibacillus phosphorivorans, TY7 PaGL#38_02964312-364
PaGL#38_03171298-359
Syntrophomonas wolfei, saponavida Swsap_01412308-369
Swsap_01418303-364
Micromonospora inositola, Utrum1 PaGL#61_05081316-372
Niallia taxi, AG-1 PaGL#37_00755280-334
PaGL#37_00820271-317
MPOB, Sfum 639704549:Sfum_03874303-364
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_00326271-333
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111565:Swol_01534322-383
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1264:Szehn_01240273-337
Ga0124040_1284:Szehn_01663302-358
Szehn_01664321-380
Ga0124040_1286:Szehn_01665310-366
Ga0124040_13913:Szehn_02239326-387
Szehn_02241235-295
Ga0124040_10921:Szehn_00592316-377
Ga0124040_11852:Szehn_00999327-387
Szehn_00364314-372
Syntrophus aciditrophicus, SB SYN_01958278-333
Ruminococcus callidus, ATCC 27760 Rcal_00004317-372
Rcal_01485291-347
Rcal_01495318-377
Rcal_01647304-372
Rcal_01654318-378
Rcal_01655306-358
Rcal_01807312-369
Rcal_01809324-383
Rcal_01813324-383
Rcal_01815314-370
Rcal_01875312-377
Rcal_02255694-757
Rcal_02277332-392
Rcal_02288318-377
Rcal_02351192-253
Rcal_02369310-366
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