SMPP Home

NEIHKHHH_00879 Locus tags: • Sequence Length: 2623

Pseudobacteroides cellulosolvens, DSM 2933 GCF_001262605.1

20020040040060060080080010001000120012001400140016001600180018002000200022002200240024002600260028002800
Show complete sequence
Click domain (colored bar) to show sequence
NEIHKHHH_00875 NEIHKHHH_00879 NEIHKHHH_00880 NEIHKHHH_00881 
    [PF03534]_[PF12256]_[PF12255]_[TM]

    [49:PF03534]_[695:PF12256]_[919:PF12255]_[TM]

    [47:IPR003284]_[49:IPR003284]_[218:IPR003284]_[326:IPR003284]_[451:IPR028994]_[695:IPR022045]_[919:IPR022044]_[TM]

Looking for similar signatures in the working genomes

PF03534:SpvB. Salmonella virulence plasmid 65kDa B protein

Found 8 similar signatures
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753083.1:NEIHKHHH_0087949-346
FD_25_22, AnGL7 AnGL7_0188346-354
FD_YE_37_3, AnGL26 AnGL26_01022112-204
FD_YE_37_8_2, AnGL3 AnGL3_02317110-161
Sunxiuqinia elliptica, AnGL22 AnGL22_01023112-204
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0324533-203
PaGL#35_0533444-335
Micromonospora inositola, Utrum1 PaGL#61_04967173-411

PF12256:TcdB_toxin_midN. Insecticide toxin TcdB middle/N-terminal region

Found 3 similar signatures
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753083.1:NEIHKHHH_00879695-829
FD_25_22, AnGL7 AnGL7_01883709-846
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_05334696-830

PF12255:TcdB_toxin_midC. Insecticide toxin TcdB middle/C-terminal region

Found 3 similar signatures
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753083.1:NEIHKHHH_00879919-1062
FD_25_22, AnGL7 AnGL7_01883937-1067
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_05334903-1034
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA