SMPP Home

NEIHKHHH_01390 Locus tags: • Sequence Length: 222

Pseudobacteroides cellulosolvens, DSM 2933 GCF_001262605.1

5050100100150150200200250250
Show complete sequence
Click domain (colored bar) to show sequence
NEIHKHHH_01386 NEIHKHHH_01387 NEIHKHHH_01393 
    [PF03050]_[PF13817]

    [3:PF03050]_[143:PF13817]

    [3:IPR004291]_[143:IPR039552]

Looking for similar signatures in the working genomes

PF03050:DDE_Tnp_IS66. Transposase IS66 family

Found 109 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510060965:NJMEOJLD_00547185-472
2510060545:NJMEOJLD_00792194-486
2510061590:NJMEOJLD_01809185-472
2510061685:NJMEOJLD_01901185-472
2510061691:NJMEOJLD_01906185-472
2510063338:NJMEOJLD_035218-230
NJMEOJLD_03522185-255
NJMEOJLD_035650-136
2510063394:NJMEOJLD_03573185-472
NJMEOJLD_0417281-291
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753038.1:NEIHKHHH_00647183-469
NEIHKHHH_013903-138
WP_050753207.1:NEIHKHHH_013947-75
WP_050753038.1:NEIHKHHH_02868183-469
WP_050753454.1:NEIHKHHH_02902163-439
WP_160317740.1:NEIHKHHH_0348621-132
NEIHKHHH_0348716-179
WP_050753568.1:NEIHKHHH_03509183-469
WP_050753869.1:NEIHKHHH_05424163-439
WP_050753914.1:NEIHKHHH_05602183-469
Ruminococcus albus_7, DSM 20455 WP_043551139.1:HCIAFFOI_03614176-395
WP_013483770.1:HCIAFFOI_03906186-470
WP_080557327.1:HCIAFFOI_0394936-319
WP_013483394.1:HCIAFFOI_04043176-459
WP_013483805.1:HCIAFFOI_001571-215
WP_050793248.1:HCIAFFOI_0015884-146
WP_013497105.1:HCIAFFOI_00366176-451
HCIAFFOI_007214-287
WP_242843408.1:HCIAFFOI_007870-133
WP_050793258.1:HCIAFFOI_00789176-287
WP_050793267.1:HCIAFFOI_01189176-459
WP_013498099.1:HCIAFFOI_01468187-470
WP_013483805.1:HCIAFFOI_015210-243
HCIAFFOI_015368-190
WP_013498634.1:HCIAFFOI_02040175-458
WP_013483805.1:HCIAFFOI_02115176-459
WP_013483394.1:HCIAFFOI_0238684-276
HCIAFFOI_023871-74
WP_013499131.1:HCIAFFOI_02593125-409
WP_013483805.1:HCIAFFOI_028004-287
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112363:GJLLLGJL_02306175-461
GJLLLGJL_02396189-475
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_190530276.1:PROKKA_02271173-459
WP_190530276.1:PROKKA_02692142-428
WP_244648271.1:PROKKA_03382204-490
PROKKA_010791-75
Syntrophomonas erecta, DSM 16215 OINOEOOJ_016601-61
OINOEOOJ_01968174-460
FD_25_22, AnGL7 AnGL7_00231161-436
AnGL7_016292-226
AnGL7_0343034-309
FD_25_27, AnGL8 AnGL8_00040191-475
AnGL8_003543-142
AnGL8_01069156-423
AnGL8_031766-168
AnGL8_03179157-258
FD_YE_25_21, AnGL21 AnGL21_01464176-460
AnGL21_0140513-77
AnGL21_0140676-156
AnGL21_014110-204
AnGL21_014141-42
AnGL21_014202-61
AnGL21_014270-191
AnGL21_01440198-497
AnGL21_014830-191
FD_YE_37_8_2, AnGL3 AnGL3_00590215-496
AnGL3_0241850-99
Syntrophus buswellii, Sbus Sbus_00711157-391
Sbus_02062157-386
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00088174-460
Sespor_019781-61
Syntrophomonas wolfei methylbutyratica, Swm Swm_01524189-472
Swm_024993-218
FD-25-21, AnGL21 AnGL21_00679157-434
AnGL21_01904157-434
AnGL21_02633157-434
Methylobacterium radiotolerans, GTSA1 PaGL#34_0149057-161
PaGL#34_02860171-462
PaGL#34_06099136-397
Syntrophomonas erecta, GB-438 Ga0610585_016601-61
Ga0610585_01968174-460
Maridesulfovibrio salexigens, AnGL23 AnGL23_01104178-465
AnGL23_0114897-384
Clostridium subterminale, CB-LS10-1 AnGL53_02408191-483
AnGL53_02427124-390
AnGL53_026841-135
Variovorax paradoxus, SPNA7 PaGL#43_02244184-471
PaGL#43_04137191-480
Methanospirillum hungatei, GP1 MhGP1_00406161-438
MhGP1_02571161-438
Methanospirillum stamsii, Pt1 MLKi8_00549167-447
MLKi8_005851-234
MLKi8_00805181-463
MLKi8_0153624-81
Methanospirillum.hungatei GP1, MhGP1 8064049851:MhGP1_00332161-438
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11370:Mhun_00368182-465
Ga0065338_112164:Mhun_02161167-311
Ga0065338_112473:Mhun_02471182-465
MPOB, Sfum Sfum_0383245-160
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112363:Swol_02306175-461
Swol_02396189-475
Syntrophus gentianae, DSM8423 Sgen_020090-109
Ga0074853_1622:Sgen_03381195-475
Ga0074853_1515:Sgen_0332610-290
Ga0074853_101212:Sgen_002115-115
Ruminococcus callidus, ATCC 27760 Rcal_0172150-331
Rcal_01735194-474
Rcal_02205194-276
Rcal_022062-195

PF13817:DDE_Tnp_IS66_C. IS66 C-terminal element

Found 49 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510060965:NJMEOJLD_00547478-519
2510061590:NJMEOJLD_01809478-519
2510061685:NJMEOJLD_01901478-519
2510061691:NJMEOJLD_01906478-519
2510063338:NJMEOJLD_03521236-277
NJMEOJLD_03565142-183
2510063394:NJMEOJLD_03573478-519
Pseudobacteroides cellulosolvens, DSM 2933 NEIHKHHH_01390143-184
Ruminococcus albus_7, DSM 20455 WP_013483770.1:HCIAFFOI_03906475-517
WP_080557327.1:HCIAFFOI_03949324-366
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112363:GJLLLGJL_02306467-508
GJLLLGJL_02396481-522
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_190530276.1:PROKKA_02271464-505
WP_190530276.1:PROKKA_02692433-474
WP_244648271.1:PROKKA_03382496-537
PROKKA_0227523-64
PROKKA_0107980-121
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0166066-92
OINOEOOJ_01968465-506
FD_25_22, AnGL7 AnGL7_00231441-478
AnGL7_01629231-268
AnGL7_03430314-351
FD_YE_25_21, AnGL21 AnGL21_01464466-503
AnGL21_01411209-248
AnGL21_0142067-104
AnGL21_01483198-235
FD_YE_37_8_2, AnGL3 AnGL3_00590502-543
AnGL3_02418105-146
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00088465-506
Sespor_0197866-92
Syntrophomonas wolfei methylbutyratica, Swm Swm_01524477-519
Methylobacterium radiotolerans, GTSA1 PaGL#34_02860468-506
Syntrophomonas erecta, GB-438 Ga0610585_0166066-92
Ga0610585_01968465-506
Maridesulfovibrio salexigens, AnGL23 AnGL23_01104471-509
AnGL23_01148389-425
Clostridium subterminale, CB-LS10-1 AnGL53_02408488-529
AnGL53_024283-44
Variovorax paradoxus, SPNA7 PaGL#43_02244477-515
PaGL#43_04137486-524
MPOB, Sfum Sfum_03832166-204
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112363:Swol_02306467-508
Swol_02396481-522
Syntrophus gentianae, DSM8423 Sgen_02009115-152
Ga0074853_1622:Sgen_03381481-518
Ga0074853_1515:Sgen_03326296-333
Ga0074853_1101:Sgen_019251-38
Ruminococcus callidus, ATCC 27760 Rcal_01735480-522
Rcal_02206201-243
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA