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NEIHKHHH_02562 Locus tags: • Sequence Length: 231

Pseudobacteroides cellulosolvens, DSM 2933 GCF_001262605.1

5050100100150150200200250250
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rplX rplN rpsQ rpmC rplP NEIHKHHH_02562rpsC NEIHKHHH_02565rplB NEIHKHHH_02566 NEIHKHHH_02567rplD 
    [PF07650]_[PF00189]

    [37:PF07650]_[119:PF00189]

    [1:IPR009019]_[37:IPR004044]_[38:IPR004044]_[59:IPR004087]_[107:IPR036419]_[119:IPR001351]

Looking for similar signatures in the working genomes

PF07650:KH_2. KH domain

Found 330 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514635.1:LOMAGDGF_0046837-111
WP_003515732.1:LOMAGDGF_01162217-271
WP_003515685.1:LOMAGDGF_01186205-284
WP_003516315.1:LOMAGDGF_015001-74
WP_003519032.1:LOMAGDGF_01860559-614
WP_003516468.1:LOMAGDGF_0312166-131
Clostridium acetobutylicum, DSM 1731 WP_010966995.1:FHOCHPCF_0379562-131
WP_010964607.1:FHOCHPCF_01349203-280
WP_010965063.1:FHOCHPCF_018001-74
WP_010965114.1:FHOCHPCF_01852555-612
WP_010965122.1:FHOCHPCF_01860206-265
WP_010966406.1:FHOCHPCF_0317237-110
Acetivibrio alkalicellulosi, DSM 17461 2510060383:NJMEOJLD_006311-74
2510060857:NJMEOJLD_0109463-134
2510061244:NJMEOJLD_0147437-111
2510061718:NJMEOJLD_01933205-284
2510062022:NJMEOJLD_02230222-276
2510064025:NJMEOJLD_04196559-614
Pseudobacteroides cellulosolvens, DSM 2933 NEIHKHHH_00361200-254
WP_036946323.1:NEIHKHHH_00393559-609
WP_036942970.1:NEIHKHHH_006751-74
WP_036940355.1:NEIHKHHH_01007205-284
WP_036945071.1:NEIHKHHH_0256237-110
WP_036943240.1:NEIHKHHH_0507564-132
Ruminococcus albus_7, DSM 20455 WP_013496805.1:HCIAFFOI_0004359-126
WP_013497167.1:HCIAFFOI_004361-76
WP_013498491.1:HCIAFFOI_01890204-286
WP_013499263.1:HCIAFFOI_02743559-614
WP_013499613.1:HCIAFFOI_03128214-268
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_00927553-610
GJLLLGJL_01295208-251
GJLLLGJL_015641-74
Ga0065332_111665:GJLLLGJL_01633202-280
GJLLLGJL_0244236-109
Ga0065332_112744:GJLLLGJL_0269763-134
Paenibacillus guangzhouensis, KCTC 33171 WP_152392156.1:KDFAKKPF_00602208-286
WP_152392433.1:KDFAKKPF_009341-74
WP_152392516.1:KDFAKKPF_01028554-612
WP_152392541.1:KDFAKKPF_01054206-262
WP_152395413.1:KDFAKKPF_0440636-109
WP_152395808.1:KDFAKKPF_0490090-155
Clostridium acetobutylicum, ATCC 824 WP_010964607.1:OJAMHIDJ_01353203-280
WP_010965063.1:OJAMHIDJ_018081-74
WP_010965114.1:OJAMHIDJ_01860555-612
WP_010965122.1:OJAMHIDJ_01868206-265
WP_010966406.1:OJAMHIDJ_0318137-110
WP_010966995.1:OJAMHIDJ_0380862-131
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697966.1:PROKKA_0072238-110
WP_137696291.1:PROKKA_01730213-267
WP_137696049.1:PROKKA_01994560-614
WP_137695988.1:PROKKA_020591-74
WP_137698582.1:PROKKA_02383204-282
WP_137697045.1:PROKKA_0385167-134
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00329202-280
OINOEOOJ_00618209-263
OINOEOOJ_01036540-598
OINOEOOJ_015481-74
OINOEOOJ_0221964-135
OINOEOOJ_0239336-110
FD_25_22, AnGL7 AnGL7_00683205-282
AnGL7_02823554-612
AnGL7_0353737-111
FD_25_27, AnGL8 AnGL8_0128137-111
AnGL8_01664206-284
AnGL8_02400557-601
FD_MS_7_1, AnGL28 AnGL28_012821-74
AnGL28_02091241-291
AnGL28_02564555-613
AnGL28_02629219-295
AnGL28_0285937-110
FD_SO4_25_1_F22, AnGL30 AnGL30_00468205-259
AnGL30_00616202-279
AnGL30_0094436-110
AnGL30_01439559-620
FD_SO4_37_1, AnGL2 AnGL2_004121-74
AnGL2_01220241-291
AnGL2_01693555-613
AnGL2_01758219-295
AnGL2_0198837-110
FD_YE_25_21, AnGL21 AnGL21_00436229-307
AnGL21_02538557-614
AnGL21_0286437-111
FD_YE_37_3, AnGL26 AnGL26_00477211-264
AnGL26_0112536-110
AnGL26_01244203-280
AnGL26_02342565-626
FD_YE_37_8_2, AnGL3 AnGL3_00303202-253
AnGL3_0142136-110
AnGL3_01439203-280
AnGL3_02756561-622
FD_YE_37_9_2, AnGL4 AnGL4_00022559-614
AnGL4_00067212-270
AnGL4_00212203-282
AnGL4_0170561-133
AnGL4_0237136-109
AnGL4_033361-74
Syntrophus buswellii, Sbus Sbus_0047837-109
Sbus_010211-74
Sbus_01084203-281
Sbus_01128121-185
Sbus_02144215-268
Sbus_02524563-620
Syntrophomonas curvata, Scurva Scurva_01306554-612
Scurva_01680191-234
Scurva_020701-74
Scurva_02103202-280
Scurva_0280136-109
Scurva_0302562-134
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00386209-263
Sespor_00676202-280
Sespor_0112436-110
Sespor_0135364-135
Sespor_020891-74
Sespor_02612540-598
Syntrophomonas wolfei methylbutyratica, Swm Swm_01019553-610
Swm_01463208-251
Swm_017271-74
Swm_01836202-280
Swm_0282536-110
Swm_0305263-134
Terrisporobacter hibernicus, AnGL54 AnGL54_01976219-278
AnGL54_01987555-613
AnGL54_020721-74
AnGL54_02381203-282
AnGL54_0316067-137
AnGL54_0328839-108
FD-25-21, AnGL21 AnGL21_01916205-282
AnGL21_0273537-111
AnGL21_03399555-612
Sunxiuqinia elliptica, AnGL22 AnGL22_00478211-264
AnGL22_0112736-110
AnGL22_01246203-280
AnGL22_02339565-626
Paraclostridium benzoelyticum, AnGL27 AnGL27_0062992-162
AnGL27_0075539-110
AnGL27_01381203-282
AnGL27_01570554-613
AnGL27_01582205-264
AnGL27_031571-74
FD-MS-7-8, AnGL9 AnGL9_01242555-613
AnGL9_022631-74
AnGL9_02343219-267
AnGL9_02685218-295
AnGL9_0304938-110
FD-YE-37-9-3, AnGL29 AnGL29_005941-74
AnGL29_00747559-614
AnGL29_00792212-270
AnGL29_00937203-282
AnGL29_0243061-133
AnGL29_0309636-109
Methylobacterium radiotolerans, GTSA1 PaGL#34_01113556-614
PaGL#34_0247838-110
PaGL#34_03773254-315
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00363202-279
PaGL#35_01689218-268
PaGL#35_03398560-621
PaGL#35_0589236-110
Syntrophomonas erecta, GB-438 Ga0610585_00329202-280
Ga0610585_00618209-263
Ga0610585_01036540-598
Ga0610585_015481-74
Ga0610585_0221964-135
Ga0610585_0239336-110
Variovorax sp., EBFNA2 PaGL#33_04117557-616
PaGL#33_04743237-308
PaGL#33_0560337-110
Variovorax paradoxus, 2u118 PaGL#32_01386237-308
PaGL#32_03618557-616
PaGL#32_0488937-110
Dietzia cinnamea, 55 PaGL#56_01146211-291
PaGL#56_01749601-657
PaGL#56_017986-67
PaGL#56_0233936-109
Maridesulfovibrio salexigens, AnGL23 AnGL23_0203637-109
AnGL23_02165202-272
AnGL23_02245562-619
AnGL23_030612-75
AnGL23_03282213-291
AnGL23_03650211-269
Exiguobacterium mexicanum, AnGL24 AnGL24_01315556-613
AnGL24_01745212-269
AnGL24_01914207-286
AnGL24_0296737-109
Clostridium subterminale, CB-LS10-1 AnGL53_011401-74
AnGL53_01172555-612
AnGL53_01180209-264
AnGL53_01252203-281
AnGL53_0334438-112
AnGL53_0368864-131
Priestia megaterium, 10L1 PaGL#57_0212136-109
PaGL#57_0226466-128
PaGL#57_03002207-285
PaGL#57_033372-74
PaGL#57_03404556-615
PaGL#57_03431212-266
Variovorax paradoxus, SPNA7 PaGL#43_01385237-308
PaGL#43_03657557-616
PaGL#43_0507637-110
Methanospirillum lacunae, Ki8-1 MLKi8_0043818-85
MLKi8_009156-58
100-148
MLKi8_021623-67
77-134
MLKi8_0238416-72
75-134
Geodermatophilus sp., RDM14 PaGL#36_01556231-314
PaGL#36_03212596-654
PaGL#36_032702-65
PaGL#36_0378237-109
Methylorubrum populi, CTY4 PaGL#39_0191238-110
PaGL#39_02015230-302
PaGL#39_03901556-614
Fictibacillus phosphorivorans, TY7 PaGL#38_0052836-107
PaGL#38_022552-74
PaGL#38_02328553-611
PaGL#38_02354214-270
PaGL#38_03105207-286
PaGL#38_0479964-131
Methanospirillum hungatei, GP1 MhGP1_0065820-86
MhGP1_009086-60
100-148
MhGP1_0262822-77
80-137
MhGP1_026833-67
78-130
Methanospirillum stamsii, Pt1 MLKi8_0090720-86
MLKi8_011616-60
MLKi8_0332916-71
75-131
MLKi8_033853-67
Syntrophomonas wolfei, saponavida Swsap_00092538-596
Swsap_0095836-110
Swsap_0116463-134
Swsap_02058202-280
Swsap_020881-74
Swsap_02632202-259
Bacillus subtilis, 30VD-1 PaGL#66_0004636-109
PaGL#66_0019667-131
PaGL#66_01761207-285
PaGL#66_02436213-267
PaGL#66_02461556-615
PaGL#66_025306-79
Peribacillus frigoritolerans, 30N-5 PaGL#67_0013036-109
PaGL#67_0027967-128
PaGL#67_02168214-293
PaGL#67_03903212-269
PaGL#67_03931555-614
PaGL#67_040041-74
Micromonospora inositola, Utrum1 PaGL#61_016735-64
PaGL#61_01767584-642
PaGL#61_01825281-319
PaGL#61_05740210-287
PaGL#61_0640936-109
Sphingomonas sp., CR2A3 PaGL#62_02553204-282
PaGL#62_02888554-612
PaGL#62_0348937-110
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0012439-108
AnGL54_02779219-278
AnGL54_02790555-613
AnGL54_028751-74
AnGL54_03185203-282
AnGL54_0396367-137
Niallia taxi, AG-1 PaGL#37_0014536-107
PaGL#37_013841-74
PaGL#37_01457558-614
PaGL#37_01486216-270
PaGL#37_02719212-290
PaGL#37_0396961-130
Methanospirillum.hungatei GP1, MhGP1 8064046847:MhGP1_002203-67
78-130
8064046902:MhGP1_0027522-77
80-137
8064048667:MhGP1_019946-60
100-148
8064048921:MhGP1_0224420-86
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111690:Mhun_0169116-72
76-131
Ga0065338_111746:Mhun_017473-67
78-130
Mhun_0323220-86
Ga0065338_113465:Mhun_034616-59
MPOB, Sfum 639700773:Sfum_000253-76
639701637:Sfum_00908211-290
639702002:Sfum_01279553-611
Sfum_0161036-110
639703349:Sfum_02659213-267
639703369:Sfum_0267867-136
639703812:Sfum_030792-75
639703963:Sfum_032736-79
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_024721-74
Spalm_0269736-110
Spalm_00035202-280
Spalm_0192812-82
Spalm_01338209-262
Spalm_01417538-595
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_00927553-610
Swol_01295208-251
Swol_015641-74
Ga0065332_111665:Swol_01633202-280
Swol_0244236-109
Ga0065332_112744:Swol_0269763-134
Syntrophomonas zehnderi, OL-4 Szehn Szehn_02423202-280
Ga0124040_11253:Szehn_0084465-136
Szehn_01770209-264
Ga0124040_13187:Szehn_019141-74
Szehn_01580533-590
Szehn_0029036-110
Syntrophus aciditrophicus, SB 637858615:SYN_0028636-109
637859044:SYN_00688214-267
637859465:SYN_01071115-183
SYN_020281-74
637860648:SYN_02191203-281
637860675:SYN_022171-74
637861017:SYN_02520563-620
Syntrophus gentianae, DSM8423 Sgen_03093215-268
Ga0074853_10712:Sgen_01176125-189
Ga0074853_11533:Sgen_02041203-281
Ga0074853_11754:Sgen_022231-74
Sgen_0028236-109
Ga0074853_101149:Sgen_00148563-620
Mucilaginibacter gossypii, cycad 4 PaGL#42_02515560-621
PaGL#42_04489202-279
PaGL#42_05727218-268
PaGL#42_0587336-110
Ruminococcus callidus, ATCC 27760 Rcal_00075139-204
Rcal_0012738-110
Rcal_001751-76
Rcal_00263221-259
Rcal_00586204-283
Rcal_00745558-615

PF00189:Ribosomal_S3_C. Ribosomal protein S3, C-terminal domain

Found 63 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514635.1:LOMAGDGF_00468119-202
Clostridium acetobutylicum, DSM 1731 WP_010966406.1:FHOCHPCF_03172120-203
Acetivibrio alkalicellulosi, DSM 17461 2510061244:NJMEOJLD_01474119-202
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945071.1:NEIHKHHH_02562119-202
Ruminococcus albus_7, DSM 20455 WP_013496805.1:HCIAFFOI_00043135-218
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_02442118-201
Paenibacillus guangzhouensis, KCTC 33171 WP_152395413.1:KDFAKKPF_04406119-202
Clostridium acetobutylicum, ATCC 824 WP_010966406.1:OJAMHIDJ_03181120-203
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697966.1:PROKKA_00722119-202
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02393118-201
FD_25_22, AnGL7 AnGL7_03537119-202
FD_25_27, AnGL8 AnGL8_01281119-202
FD_MS_7_1, AnGL28 AnGL28_02859119-202
FD_SO4_25_1_F22, AnGL30 AnGL30_00944118-201
FD_SO4_37_1, AnGL2 AnGL2_01988119-202
FD_YE_25_21, AnGL21 AnGL21_02864119-202
FD_YE_37_3, AnGL26 AnGL26_01125118-201
FD_YE_37_8_2, AnGL3 AnGL3_01421118-201
FD_YE_37_9_2, AnGL4 AnGL4_02371118-201
Syntrophus buswellii, Sbus Sbus_00478118-201
Syntrophomonas curvata, Scurva Scurva_02801118-201
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01124118-201
Syntrophomonas wolfei methylbutyratica, Swm Swm_02825118-201
Terrisporobacter hibernicus, AnGL54 AnGL54_03288120-203
FD-25-21, AnGL21 AnGL21_02735119-202
Sunxiuqinia elliptica, AnGL22 AnGL22_01127118-201
Paraclostridium benzoelyticum, AnGL27 AnGL27_00755120-203
FD-MS-7-8, AnGL9 AnGL9_03049119-202
FD-YE-37-9-3, AnGL29 AnGL29_03096118-201
Methylobacterium radiotolerans, GTSA1 PaGL#34_02478119-202
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_05892118-201
Syntrophomonas erecta, GB-438 Ga0610585_02393118-201
Variovorax sp., EBFNA2 PaGL#33_05603119-202
Variovorax paradoxus, 2u118 PaGL#32_04889119-202
Dietzia cinnamea, 55 PaGL#56_02339118-202
Maridesulfovibrio salexigens, AnGL23 AnGL23_02036118-201
Exiguobacterium mexicanum, AnGL24 AnGL24_02967119-202
Clostridium subterminale, CB-LS10-1 AnGL53_03344120-203
Priestia megaterium, 10L1 PaGL#57_02121118-201
Variovorax paradoxus, SPNA7 PaGL#43_05076119-202
Methanospirillum lacunae, Ki8-1 MLKi8_0043898-182
Geodermatophilus sp., RDM14 PaGL#36_03782118-202
Methylorubrum populi, CTY4 PaGL#39_01912119-202
Fictibacillus phosphorivorans, TY7 PaGL#38_00528118-201
Methanospirillum hungatei, GP1 MhGP1_0065898-181
Methanospirillum stamsii, Pt1 MLKi8_0090798-181
Syntrophomonas wolfei, saponavida Swsap_00958118-201
Bacillus subtilis, 30VD-1 PaGL#66_00046118-201
Peribacillus frigoritolerans, 30N-5 PaGL#67_00130118-201
Micromonospora inositola, Utrum1 PaGL#61_06409118-202
Sphingomonas sp., CR2A3 PaGL#62_03489119-202
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00124120-203
Niallia taxi, AG-1 PaGL#37_00145118-201
Methanospirillum.hungatei GP1, MhGP1 8064048921:MhGP1_0224498-181
Methanospirillum.hungatei.JF-1, MhunJF1 Mhun_0323298-181
MPOB, Sfum Sfum_01610118-201
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_02697118-201
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_02442118-201
Syntrophomonas zehnderi, OL-4 Szehn Szehn_00290118-201
Syntrophus aciditrophicus, SB 637858615:SYN_00286118-201
Syntrophus gentianae, DSM8423 Sgen_00282118-201
Mucilaginibacter gossypii, cycad 4 PaGL#42_05873118-201
Ruminococcus callidus, ATCC 27760 Rcal_00127119-202
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