Cellulosome Database Search

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Genome ifo

Syntrophobacter.fumaroxidans.MPOB: MPOB, Sfum [-] (IMG)

Genbanks info:

Genbank_acc: 639703144:Sfum_02442
Genome uid: 407
2934016-2938545 [+] (1509)

Sequence:

RYLKLLVIPLVLVVVCAFLLHAAYVAVNNKTIDQLNDLQRMLAKEAALGLESYFNDCRHHLKTLSEMKDVIHWNDQGKDL
LRMFHRMSEGDIEVILRTDAQGRVVYCFPEESRAEDLARRNIPDGAPAGREPVVSDPLFTEDGWSGIPIRVPVLEDDTYT
GTLIVLIRLDKLAERYLGGIKIGKDGYAWAIDRNGVELYCPVPGHVGKSVFENCRDFPAIITMAKAMTEGQSGVTTYSFD
HIRGELTTVSNKHAVFQPLRMGGTFWSVVVATPENEVLGIIDEFRNTWSYVVGVLLVGAGIWLYYLTRAFLIVEEEKKRK
VAEQALRVSEVKYRTLFESARAAICIIQDWKFVDANESARALLGIREGMDFDSAMENLSPCGLPGGGDSRQLLRERIRAV
LASGAPEAFELRFLRGDGTRLDMYASVDRLELGAQTLVQAIIRDITAYKQAIEATEKSERMLHRIIQASPNPTFVIGKDH
RVLYWNAALEKFSGIGSEDMIGTNRHWSAFYDGERPCMADLLLDEDLKEFSKRYGHAARKSDLVAGAFEATPFLPNLGTG
GKWLHVTAGPVRDSRGAIVGAVQSVQDITERKLAELALQQEKEFSDTLIDVLPGMFFVLDTEGRFVRWNRVVRETIGTSD
EQMDGLDALIPVLAEDRHLIAGAIRNVFERGYADTTARIITGQNEVRHFYFSGKKIVIGKNTFLLATGLDVTERQKAEDA
LISANQQLYDIIEFLPDATLVLDNGKRVIAWNRAIETMTGASKQDMIGKGDNACMVPLYGGPRPHLPDLIDVGDDELESK
YHYVKRAGNVVYAETFLPCVYGGKGAYVMAKAAPLFDAHGNRVGVIESIRDITEYKQAEEALRESRRQLADIIDFLPNAT
FVIDREGRVIAWNRAIEEMTGVNAADMLGRGDYEYALPFYGKRRPILIDLVLHPLGQEGAAYSKIGKGGTVFEAEEHTPT
LRGRGAYLIGTASVLRDSKGNIVGAIESLRDITERKRMEEALARAEEKYRSIFENALEGIFQTTPEGRFLSVNPSLARIL
GYGSPEETIRSVTDLSRQVYVDPERRLELLQLTLERGIVQDFEIQVQRKDRSLAWIKISLRGVRDRGGRLIYMEGTAQDI
TDRKVLESRLLQAQKIEAIGTLAGGIAHDFNNILAAIIGYTEMTRQTVEHPDPRRYLDQVLKACDRARNLVGQILAFSRK
AERDIRPVDVRSIVKEALKFLRATLSSTIKIRQKIAPGTHAVLADPTQIHQVLINLCTNAAHAMREKGGVLQVDLENIDV
RPGSTAFPADLPSGPYLKLTISDTGTGIDHAILHRIFDPFFTTKRPGEGTGLGLSVVYGIVKECGGTVTVSSEPGAGSVF
SVWLPALVEGVEAAVEPVEAVPTGSERILFVDDERVLVELARTMLTALGYTVTATSDSIKAFDIFKNRADEFDLIITDLT
MPRLTGVELARAALSVRPEIPVILCTGYTEMITEEEVKQAGIRQFVMKPLNTKNVARLIRRVLDGGNA

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:SIGNAL_PEPTIDE		Signal peptide region	0	26			4924154	1769224	19	135:all secretion /signal peptide, lipo	0	0	0	2406	3	1
2	PHOBIUS:SIGNAL_PEPTIDE_N_REGION		N-terminal region of a signal peptide.	0	5			4924153	1769224	21	135:all secretion /signal peptide, lipo	0	0	0	2406	3	2
3	DeepTMHMM:signal		signal	1	24			4947954	1769224	2198	0	0	0	2406	0	3
4	PHOBIUS:SIGNAL_PEPTIDE_H_REGION		Hydrophobic region of a signal peptide.	5	21			4924156	1769224	24	135:all secretion /signal peptide, lipo	0	0	0	2406	3	4
5	PHOBIUS:SIGNAL_PEPTIDE_C_REGION		C-terminal region of a signal peptide.	21	26			4924155	1769224	26	135:all secretion /signal peptide, lipo	0	0	0	2406	3	5
6	DeepTMHMM:outside		outside	25	289			4947955	1769224	10025	0	0	0	2406	0	6
7	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	26	288			4924157	1769224	3	136:Membrane Protein	0	0	0	2406	0	7
8	CDD:cd12912		PDC2_MCP_like	176	277			4924178	1769224	1820	0	0	0	2406	0	8
9	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	288	312			4924158	1769224	5	136:Membrane Protein	0	0	0	2406	0	9
10	DeepTMHMM:TMhelix		TMhelix	290	308			4947956	1769224	2056	141:DeepTMHMM: helix	0	0	0	2406	6	10
11	DeepTMHMM:inside		inside	309	1509			4947957	1769224	9730	0	0	0	2406	0	11
12	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	312	1509			4924159	1769224	18	136:Membrane Protein	0	0	0	2406	0	12
13	SUPERFAMILY:SSF55785	IPR035965	PAS domain superfamily	318	447			4924182	1769224	289	0	0	0	2406	0	13
14	SMART:SM00091	IPR000014		331	396			4924142	1769224	1	0	0	0	2406	0	14
15	PFAM:PF13188	IPR000014	PAS domain	332	394	24.3	2.3E-5	4924147	1769224	275	0	0	0	2406	0	15
16	CDD:cd00130	IPR000014	PAS	343	446			4924175	1769224	285	0	0	0	2406	0	16
17	PROSITE_PROFILES:PS50113	IPR000700	PAC domain profile.	407	458			4924167	1769224	280	0	0	0	2406	0	17
18	SMART:SM00086	IPR001610		408	449			4924132	1769224	1	0	0	0	2406	0	18
19	SUPERFAMILY:SSF55785	IPR035965	PAS domain superfamily	444	584			4924183	1769224	289	0	0	0	2406	0	19
20	PROSITE_PROFILES:PS50112	IPR000014	PAS repeat profile.	458	542			4924162	1769224	281	0	0	0	2406	0	20
21	SMART:SM00091	IPR000014		460	529			4924138	1769224	1	0	0	0	2406	0	21
22	PFAM:PF08448	IPR013656	PAS fold	468	593	38.6	1.0E-9	4924150	1769224	453	0	0	0	2406	0	22
23	CDD:cd00130	IPR000014	PAS	469	589			4924177	1769224	285	0	0	0	2406	0	23
24	SMART:SM00086	IPR001610		547	592			4924131	1769224	1	0	0	0	2406	0	24
25	PROSITE_PROFILES:PS50113	IPR000700	PAC domain profile.	548	601			4924165	1769224	280	0	0	0	2406	0	25
26	SUPERFAMILY:SSF55785	IPR035965	PAS domain superfamily	588	713			4924187	1769224	289	0	0	0	2406	0	26
27	PROSITE_PROFILES:PS50112	IPR000014	PAS repeat profile.	601	672			4924161	1769224	281	0	0	0	2406	0	27
28	SMART:SM00091	IPR000014		603	670			4924140	1769224	1	0	0	0	2406	0	28
29	CDD:cd00130	IPR000014	PAS	612	702			4924174	1769224	285	0	0	0	2406	0	29
30	SMART:SM00086	IPR001610		674	715			4924136	1769224	1	0	0	0	2406	0	30
31	SUPERFAMILY:SSF55785	IPR035965	PAS domain superfamily	711	854			4924184	1769224	289	0	0	0	2406	0	31
32	PROSITE_PROFILES:PS50112	IPR000014	PAS repeat profile.	724	770			4924160	1769224	281	0	0	0	2406	0	32
33	SMART:SM00091	IPR000014		726	795			4924137	1769224	1	0	0	0	2406	0	33
34	PFAM:PF08448	IPR013656	PAS fold	735	856	40.3	3.0E-10	4924148	1769224	453	0	0	0	2406	0	34
35	CDD:cd00130	IPR000014	PAS	735	853			4924172	1769224	285	0	0	0	2406	0	35
36	PROSITE_PROFILES:PS50113	IPR000700	PAC domain profile.	811	865			4924169	1769224	280	0	0	0	2406	0	36
37	SMART:SM00086	IPR001610		813	856			4924135	1769224	1	0	0	0	2406	0	37
38	SUPERFAMILY:SSF55785	IPR035965	PAS domain superfamily	851	989			4924186	1769224	289	0	0	0	2406	0	38
39	PROSITE_PROFILES:PS50112	IPR000014	PAS repeat profile.	865	919			4924164	1769224	281	0	0	0	2406	0	39
40	SMART:SM00091	IPR000014		867	934			4924139	1769224	1	0	0	0	2406	0	40
41	PFAM:PF08448	IPR013656	PAS fold	876	998	45.9	5.5E-12	4924149	1769224	453	0	0	0	2406	0	41
42	CDD:cd00130	IPR000014	PAS	876	993			4924176	1769224	285	0	0	0	2406	0	42
43	SMART:SM00086	IPR001610		951	996			4924134	1769224	1	0	0	0	2406	0	43
44	PROSITE_PROFILES:PS50113	IPR000700	PAC domain profile.	952	1005			4924166	1769224	280	0	0	0	2406	0	44
45	SUPERFAMILY:SSF55785	IPR035965	PAS domain superfamily	992	1122			4924185	1769224	289	0	0	0	2406	0	45
46	PROSITE_PROFILES:PS50112	IPR000014	PAS repeat profile.	1005	1082			4924163	1769224	281	0	0	0	2406	0	46
47	SMART:SM00091	IPR000014		1007	1076			4924141	1769224	1	0	0	0	2406	0	47
48	PFAM:PF13426	IPR000014	PAS domain	1018	1123	49.1	5.6E-13	4924152	1769224	275	0	0	0	2406	0	48
49	CDD:cd00130	IPR000014	PAS	1018	1121			4924173	1769224	285	0	0	0	2406	0	49
50	PROSITE_PROFILES:PS50113	IPR000700	PAC domain profile.	1080	1133			4924168	1769224	280	0	0	0	2406	0	50
51	SMART:SM00086	IPR001610		1081	1124			4924133	1769224	1	0	0	0	2406	0	51
52	SUPERFAMILY:SSF47384	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	1133	1201			4924189	1769224	108	0	0	0	2406	0	52
53	CDD:cd00082	IPR003661	HisKA	1136	1200			4924179	1769224	356	0	0	0	2406	0	53
54	SMART:SM00388	IPR003661		1138	1204			4924130	1769224	1	0	0	0	2406	0	54
55	PFAM:PF00512	IPR003661	His Kinase A (phospho-acceptor) domain	1140	1201	35.9	5.7E-9	4924146	1769224	355	0	0	0	2406	0	55
56	PROSITE_PROFILES:PS50109	IPR005467	Histidine kinase domain profile.	1145	1369			4924170	1769224	103	0	0	0	2406	0	56
57	SUPERFAMILY:SSF55874	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	1193	1367			4924181	1769224	122	0	0	0	2406	0	57
58	SMART:SM00387	IPR003594		1244	1369			4924143	1769224	1	0	0	0	2406	0	58
59	PFAM:PF02518	IPR003594	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	1245	1367	76.7	1.8E-21	4924151	1769224	99	0	0	0	2406	0	59
60	PRINTS:PR00344	IPR004358	Bacterial sensor protein C-terminal signature	1297	1312			4924129	1769224	95	0	0	0	2406	0	60
61	PRINTS:PR00344	IPR004358	Bacterial sensor protein C-terminal signature	1315	1326			4924126	1769224	95	0	0	0	2406	0	61
62	PRINTS:PR00344	IPR004358	Bacterial sensor protein C-terminal signature	1328	1347			4924128	1769224	95	0	0	0	2406	0	62
63	PRINTS:PR00344	IPR004358	Bacterial sensor protein C-terminal signature	1352	1366			4924127	1769224	95	0	0	0	2406	0	63
64	SMART:SM00448	IPR001789		1386	1503			4924144	1769224	1	0	0	0	2406	0	64
65	SUPERFAMILY:SSF52172	IPR011006	CheY-like superfamily	1386	1505			4924188	1769224	129	0	0	0	2406	0	65
66	PROSITE_PROFILES:PS50110	IPR001789	Response regulatory domain profile.	1387	1504			4924171	1769224	125	0	0	0	2406	0	66
67	PFAM:PF00072	IPR001789	Response regulator receiver domain	1388	1497	69.6	2.3E-19	4924145	1769224	123	0	0	0	2406	0	67
68	CDD:cd00156		REC	1389	1490			4924180	1769224	791	0	0	0	2406	0	68

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