Cellulosome Database Search

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Genome ifo

Gs0120309: Syntrophomonas wolfei (Swol), Goettingen.DSM2245B [+] (IMG)

Genbanks info:

Genbank_acc: Swol_00843
Genome uid: 409
940837-941811 [+] (324)

Sequence:

QNYLSNAFLAAAIAIVVSIIMGPIMIPFLKRLKVGQSIREEGPKGHYAKAGTPTMGGIIIITAVMLASFIMAGTSTEALA
AVLLMLAFGSVGFWDDYIKVVLKRSLGLRAREKLGLQLLIAFLFGLLLILYFKRGTAILIPFTGHAVDLGWWYLPFIVFV
VVSTANAVNLTDGLDGLASGVSFFVSLALAVICVMTGHYSLSVFCGALAGACLGFLVFNRHPARVFMGDTGSMALGGAVA
AVAALTRSEIALIIIGGVYVIETLSVILQVISYQTTRKRIFRMAPLHHHYELKGWPETRVVRYFWGLSFVFMLLGIWSFW
GVG

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	0	5			5025725	1779932	3	136:Membrane Protein	0	0	0	828	0	1
2	DeepTMHMM:outside		outside	1	8			5034189	1779932	10025	0	0	0	828	0	2
3	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	5	30			5025719	1779932	5	136:Membrane Protein	0	0	0	828	0	3
4	DeepTMHMM:TMhelix		TMhelix	9	27			5034190	1779932	2056	141:DeepTMHMM: helix	0	0	0	828	6	4
5	DeepTMHMM:inside		inside	28	57			5034191	1779932	9730	0	0	0	828	0	5
6	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	30	50			5025732	1779932	18	136:Membrane Protein	0	0	0	828	0	6
7	CDD:cd06852	IPR003524	GT_MraY	42	319			5025735	1779932	3455	0	0	0	828	0	7
8	PFAM:PF10555	IPR018480	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1	49	62	24	1.8E-5	5025712	1779932	4005	0	0	0	828	0	8
9	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	50	73			5025718	1779932	5	136:Membrane Protein	0	0	0	828	0	9
10	DeepTMHMM:TMhelix		TMhelix	58	73			5034192	1779932	2056	141:DeepTMHMM: helix	0	0	0	828	6	10
11	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	73	78			5025727	1779932	3	136:Membrane Protein	0	0	0	828	0	11
12	DeepTMHMM:outside		outside	74	78			5034193	1779932	10025	0	0	0	828	0	12
13	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	78	95			5025721	1779932	5	136:Membrane Protein	0	0	0	828	0	13
14	DeepTMHMM:TMhelix		TMhelix	79	99			5034194	1779932	2056	141:DeepTMHMM: helix	0	0	0	828	6	14
15	PFAM:PF00953	IPR000715	Glycosyl transferase family 4	80	245	136.6	7.4E-40	5025713	1779932	134	0	0	0	828	0	15
16	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	95	114			5025734	1779932	18	136:Membrane Protein	0	0	0	828	0	16
17	DeepTMHMM:inside		inside	100	114			5034195	1779932	9730	0	0	0	828	0	17
18	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	114	133			5025722	1779932	5	136:Membrane Protein	0	0	0	828	0	18
19	DeepTMHMM:TMhelix		TMhelix	115	131			5034196	1779932	2056	141:DeepTMHMM: helix	0	0	0	828	6	19
20	DeepTMHMM:outside		outside	132	152			5034197	1779932	10025	0	0	0	828	0	20
21	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	133	152			5025729	1779932	3	136:Membrane Protein	0	0	0	828	0	21
22	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	152	171			5025715	1779932	5	136:Membrane Protein	0	0	0	828	0	22
23	DeepTMHMM:TMhelix		TMhelix	153	169			5034198	1779932	2056	141:DeepTMHMM: helix	0	0	0	828	6	23
24	DeepTMHMM:inside		inside	170	176			5034199	1779932	9730	0	0	0	828	0	24
25	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	171	177			5025731	1779932	18	136:Membrane Protein	0	0	0	828	0	25
26	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	177	196			5025717	1779932	5	136:Membrane Protein	0	0	0	828	0	26
27	DeepTMHMM:TMhelix		TMhelix	177	197			5034200	1779932	2056	141:DeepTMHMM: helix	0	0	0	828	6	27
28	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	196	201			5025726	1779932	3	136:Membrane Protein	0	0	0	828	0	28
29	DeepTMHMM:outside		outside	198	201			5034201	1779932	10025	0	0	0	828	0	29
30	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	201	219			5025714	1779932	5	136:Membrane Protein	0	0	0	828	0	30
31	DeepTMHMM:TMhelix		TMhelix	202	219			5034202	1779932	2056	141:DeepTMHMM: helix	0	0	0	828	6	31
32	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	219	225			5025730	1779932	18	136:Membrane Protein	0	0	0	828	0	32
33	DeepTMHMM:inside		inside	220	226			5034203	1779932	9730	0	0	0	828	0	33
34	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	225	245			5025716	1779932	5	136:Membrane Protein	0	0	0	828	0	34
35	DeepTMHMM:TMhelix		TMhelix	227	246			5034204	1779932	2056	141:DeepTMHMM: helix	0	0	0	828	6	35
36	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	245	250			5025724	1779932	3	136:Membrane Protein	0	0	0	828	0	36
37	DeepTMHMM:outside		outside	247	250			5034205	1779932	10025	0	0	0	828	0	37
38	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	250	274			5025720	1779932	5	136:Membrane Protein	0	0	0	828	0	38
39	DeepTMHMM:TMhelix		TMhelix	251	272			5034206	1779932	2056	141:DeepTMHMM: helix	0	0	0	828	6	39
40	DeepTMHMM:inside		inside	273	300			5034207	1779932	9730	0	0	0	828	0	40
41	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	274	300			5025733	1779932	18	136:Membrane Protein	0	0	0	828	0	41
42	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	300	321			5025723	1779932	5	136:Membrane Protein	0	0	0	828	0	42
43	DeepTMHMM:TMhelix		TMhelix	301	321			5034208	1779932	2056	141:DeepTMHMM: helix	0	0	0	828	6	43
44	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	321	324			5025728	1779932	3	136:Membrane Protein	0	0	0	828	0	44
45	DeepTMHMM:outside		outside	322	324			5034209	1779932	10025	0	0	0	828	0	45

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