Cellulosome Database Search

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Genome ifo

Gs0120309: Syntrophomonas wolfei (Swol), Goettingen.DSM2245B [+] (IMG)

Genbanks info:

Genbank_acc: Swol_00997
Genome uid: 409
1100462-1102795 [+] (777)

Sequence:

VQRSLKTRIILMLVIFNLLVFGFFYWNSLMLQRMLVKDFEKEYIAQTSDTVAECVRDAEKEAQILSNSLFANAAIKEAFI
QQDRAELLGLVLPVYEQWQKDHHISQLNFFSADGTAILRAQKPEQYGDDVSYRKALARVIQSRQQVMAAEKGVTGFGIRC
LNPLVVEDRLVGIYEVGISLEEAVGEALSELQQGKYGILALEKQESSVLWQSSALGVNPEAADLEKLEQGNSLSRKTSDN
RVILTLVPIKDVEGNAIAFVQGEIPRDTFIQAENRAKSRSLLIVIVSLLLVCIIAYLVLNRALRHLQPLRDSMVRVGEGD
LTAVIDLSSKDEIGKLAHGFSDLLERFREVMYALFAKSSNLTTNAYFLNDVASSSVVKLGQTAEQLDYVGGQLQGAGQNL
READTGVEEIAGASSMVAEQAQNLQETYMKLSQAAQEGKEEMKRFEEVGQLLKERGESTVHSARELEKISRDIGEITSTI
MSVSEQTNLLALNAAIESARAGEHGRGFAVVAEEIRKLAEQTAGYTRQISSLISGVQGNIGNFVVEIESMGTAIEEENQT
TSRVIARMEHIIRQIVNIQDAVMDISSAMQEQSAASQEISAVVSTVNDNMLLLISNLDQIIEDINQQMDNFSAIVDIAGE
TNDISQAFRDILEQYRLPDKVVLRQVIDDHHGFVRKYQFIVEHNLFAEPDSVPTHMQCRLARWFKSVQDKGTLELYQQLA
ANPHEQVHTLAREAIQANNQGHKDEARAHIQAMIAASDKIIAALEQLIAFKSNEGN

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	0	5			5025837	1780083	3	136:Membrane Protein	0	0	0	979	0	1
2	DeepTMHMM:inside		inside	1	9			5034528	1780083	9730	0	0	0	979	0	2
3	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	5	27			5025840	1780083	5	136:Membrane Protein	0	0	0	979	0	3
4	DeepTMHMM:TMhelix		TMhelix	10	27			5034529	1780083	2056	141:DeepTMHMM: helix	0	0	0	979	6	4
5	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	27	281			5025839	1780083	18	136:Membrane Protein	0	0	0	979	0	5
6	DeepTMHMM:outside		outside	28	281			5034530	1780083	10025	0	0	0	979	0	6
7	PFAM:PF14827	IPR029150	Double sensory domain of two-component sensor kinase	46	259	52.9	3.9E-14	5025835	1780083	6632	0	0	0	979	0	7
8	SUPERFAMILY:SSF103190	IPR029151	Periplasmic sensor-like domain superfamily	54	183			5025847	1780083	2028	0	0	0	979	0	8
9	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	281	300			5025841	1780083	5	136:Membrane Protein	0	0	0	979	0	9
10	DeepTMHMM:TMhelix		TMhelix	282	300			5034531	1780083	2056	141:DeepTMHMM: helix	0	0	0	979	6	10
11	PFAM:PF00672	IPR003660	HAMP domain	298	349	31.9	1.2E-7	5025836	1780083	454	0	0	0	979	0	11
12	SMART:SM00304	IPR003660		300	353			5025832	1780083	1	0	0	0	979	0	12
13	PROSITE_PROFILES:PS50885	IPR003660	HAMP domain profile.	300	353			5025843	1780083	455	0	0	0	979	0	13
14	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	300	777			5025838	1780083	3	136:Membrane Protein	0	0	0	979	0	14
15	DeepTMHMM:inside		inside	301	777			5034532	1780083	9730	0	0	0	979	0	15
16	CDD:cd06225		HAMP	303	347			5025845	1780083	457	0	0	0	979	0	16
17	SUPERFAMILY:SSF58104		-	320	656			5025846	1780083	12	0	0	0	979	0	17
18	PROSITE_PROFILES:PS50111	IPR004089	Bacterial chemotaxis sensory transducers domain profile.	371	608			5025842	1780083	601	0	0	0	979	0	18
19	SMART:SM00283	IPR004089		381	657			5025833	1780083	1	0	0	0	979	0	19
20	CDD:cd11386		MCP_signal	408	608			5025844	1780083	602	0	0	0	979	0	20
21	PFAM:PF00015	IPR004089	Methyl-accepting chemotaxis protein (MCP) signalling domain	458	609	127.5	4.4E-37	5025834	1780083	600	135:all secretion /signal peptide, lipo	0	0	0	979	3	21

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