Cellulosome Database Search

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Genome ifo

GCF_000007065.1: Methanosarcina mazei, Go1 [-] (ncbi)

Genbanks info:

Genbank_acc: WP_011034866.1:PCEFANMJ_03125
Genome uid: 22
3577497-3580016 [+] (839)

Sequence:

FSNTPLRTKMIVYTVLGVFLILTASTAVIISTVTTQEEKLAYQQSVEMASNYANQFDADMKANLAIARTISTTMESYETA
DRDEALLILENLLRDNPHLLGTYVAFEPDAFDGKDAEYTNSPAHDGTGRFVPYWNKMNGTASVAPLLHYDSSDYYQLPKA
TEKDVLTEPYFYEGVFMVSYVSPIMKEGEFAGIGGVDVSLEYVDEVVSKVRTFDTGYAFMVSNSGVILSHPTHKDWIGKK
DLYDFGGEELEKASRDIKNGIGGHLETADPTTGKTVILFYEPVETGDFAFVLVVPKEEMLAGVADLRERLLIISAVSILF
MAALAYMIARSVTEPINRIVKDFKSIAQDAVKGELGVRADTDVEIDFQEIPKGLNEILNAVVIPIRETMRVTNALAKGEL
KERVNVDVQGEFRELEDTLDKFSETLNMIIDDSNAVLKAFQHNNFKRPIQVKGQGDFKLLTDGIEETRLVLDRVTTQRRE
AEKSLLEYARKLEHSNRLKEELESIINSSPVIVFLWKYEEGWPIEFVSENVTRLGYEVEDFTSRKILYGNIVYPGDLEKV
ERELARNIEFGCEDYSSEYRILTKSGEVRWVDERTFIQRDEKGEIRLQGIILDITEHKKAEEALLQMVEIRKKEIHHRIK
NNLQVISTLLYLESGNFSDEKVIEAFRESQHRVKSMALVHEKLYQSEDMISVDFSDYIQNLANYLFGAYSVGDKNISLKL
DVDNIFLGMDTSVPLGIIINELVSNALKHAFQKKESGEICVCLKKEEQGSSEKNCFSLVVRDNGRGFPEEIDFRETDSLG
LQLVINLVDQIEGSIELNTHEGTEFRIRFKELRYRQRM

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	0	11			724646	45989	3	136:Membrane Protein	15	0	1	3063	0	1
2	DeepTMHMM:inside		inside	1	11			806714	45989	9730	15	0	1	3063	0	2
3	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	11	34			724650	45989	5	136:Membrane Protein	15	0	1	3063	0	3
4	DeepTMHMM:TMhelix		TMhelix	12	31			806716	45989	2056	141:DeepTMHMM: helix	15	0	1	3063	5	4
5	DeepTMHMM:outside		outside	32	310			806717	45989	10025	15	0	1	3063	0	5
6	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	34	310			724654	45989	18	136:Membrane Protein	15	0	1	3063	0	6
7	PFAM:PF02743	IPR033479	Cache domain	44	292	73.6	1.6E-20	724644	45989	1162	15	0	1	3063	0	7
8	CDD:cd12911		HK_sensor	84	201			724825	45989	7774	15	0	1	3063	0	8
9	CDD:cd12911		HK_sensor	202	297			724826	45989	7774	15	0	1	3063	0	9
10	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	310	330			724652	45989	5	136:Membrane Protein	15	0	1	3063	0	10
11	DeepTMHMM:TMhelix		TMhelix	311	330			806719	45989	2056	141:DeepTMHMM: helix	15	0	1	3063	5	11
12	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	330	839			724648	45989	3	136:Membrane Protein	15	0	1	3063	0	12
13	DeepTMHMM:inside		inside	331	839			806721	45989	9730	15	0	1	3063	0	13
14	PFAM:PF18947	IPR003660	HAMP domain	366	428	47.3	1.5E-12	724640	45989	454	15	0	1	3063	0	14
15	PROSITE_PROFILES:PS50885	IPR003660	HAMP domain profile.	379	432			724656	45989	455	15	0	1	3063	0	15
16	SMART:SM00304	IPR003660		379	432			724630	45989	1	15	0	1	3063	0	16
17	CDD:cd06225		HAMP	384	427			724827	45989	457	15	0	1	3063	0	17
18	SUPERFAMILY:SSF55785	IPR035965	PAS domain superfamily	505	621			724830	45989	289	15	0	1	3063	0	18
19	CDD:cd00130	IPR000014	PAS	509	615			724828	45989	285	15	0	1	3063	0	19
20	PFAM:PF08447	IPR013655	PAS fold	526	611	64.4	8.5E-18	724642	45989	453	15	0	1	3063	0	20
21	PROSITE_PROFILES:PS50113	IPR000700	PAC domain profile.	575	627			724658	45989	280	15	0	1	3063	0	21
22	SMART:SM00086	IPR001610		576	618			724627	45989	1	15	0	1	3063	0	22
23	PROSITE_PROFILES:PS50109	IPR005467	Histidine kinase domain profile.	634	834			724659	45989	103	15	0	1	3063	0	23
24	PFAM:PF07568	IPR011495	Histidine kinase	634	710	104.3	2.6E-30	724636	45989	1640	15	0	1	3063	0	24
25	SUPERFAMILY:SSF55874	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	692	830			724829	45989	122	15	0	1	3063	0	25
26	SMART:SM00387	IPR003594		730	834			724623	45989	1	15	0	1	3063	0	26
27	PFAM:PF02518	IPR003594	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	734	832	36.4	5.9E-9	724633	45989	99	15	0	1	3063	0	27

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