Cellulosome Database Search

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Genome ifo

GCF_022782785.1: Clostridium sp., na [+] (ncbi)

Genbanks info:

Genbank_acc: PROKKA_01973
Genome uid: 227
6860-6952 [+] (30)
Sequence:
```
KKKTREKMIYAISVFMLISFILGLIPVLM
```

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	0	23			2662740	957260	3	136:Membrane Protein	0	0	0	1276	0	1
2	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	8			2863967	957260	18	136:Membrane Protein	0	0	0	1276	0	2
3	DeepTMHMM:inside		inside	1	8			2881410	957260	9730	0	0	0	1276	0	3
4	DeepTMHMM:inside		inside	1	23			2681375	957260	9730	0	0	0	1276	0	4
5	SUPERFAMILY:SSF53623	IPR036565	Mur-like, catalytic domain superfamily	4	276			2709393	957260	64	0	0	0	1276	0	5
6	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	8	29			2863969	957260	5	136:Membrane Protein	0	0	0	1276	0	6
7	DeepTMHMM:TMhelix		TMhelix	9	26			2881411	957260	2056	141:DeepTMHMM: helix	0	0	0	1276	6	7
8	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	23	42			2662750	957260	5	136:Membrane Protein	0	0	0	1276	0	8
9	DeepTMHMM:TMhelix		TMhelix	24	39			2681376	957260	2056	141:DeepTMHMM: helix	0	0	0	1276	6	9
10	PFAM:PF12698		ABC-2 family transporter protein	25	369	160.2	0	2662737	957260	603	0	0	0	1276	0	10
11	DeepTMHMM:outside		outside	27	30			2881412	957260	10025	0	0	0	1276	0	11
12	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	29	30			2863968	957260	3	136:Membrane Protein	0	0	0	1276	0	12
13	PFAM:PF08245	IPR013221	Mur ligase middle domain	31	254	41.8	1.1E-10	2709392	957260	61	0	0	0	1276	0	13
14	SUPERFAMILY:SSF53041	IPR036162	Resolvase-like, N-terminal catalytic domain superfamily	40	190			2726958	957260	1527	0	0	0	1276	0	14
15	PROSITE_PROFILES:PS51736	IPR006119	Resolvase/invertase-type recombinase catalytic domain profile.	40	189			2726955	957260	1533	0	0	0	1276	0	15
16	DeepTMHMM:outside		outside	40	187			2681377	957260	10025	0	0	0	1276	0	16
17	PFAM:PF00239	IPR006119	Resolvase, N terminal domain	41	189	118	3.5E-34	2726954	957260	1523	0	0	0	1276	0	17
18	SMART:SM00857	IPR006119		41	191			2726951	957260	1	0	0	0	1276	0	18
19	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	42	181			2662745	957260	18	136:Membrane Protein	0	0	0	1276	0	19
20	CDD:cd00338		Ser_Recombinase	43	178			2726957	957260	1534	0	0	0	1276	0	20
21	PROSITE_PROFILES:PS51012	IPR000412	ABC transporter integral membrane type-2 domain profile.	129	375			2662753	957260	3756	136:Membrane Protein	0	0	0	1276	0	21
22	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	181	205			2662748	957260	5	136:Membrane Protein	0	0	0	1276	0	22
23	DeepTMHMM:TMhelix		TMhelix	188	199			2681378	957260	2056	141:DeepTMHMM: helix	0	0	0	1276	6	23
24	PROSITE_PROFILES:PS51737	IPR011109	DNA-binding recombinase domain profile.	195	322			2726956	957260	1526	0	0	0	1276	0	24
25	DeepTMHMM:inside		inside	200	230			2681379	957260	9730	0	0	0	1276	0	25
26	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	205	230			2662738	957260	3	136:Membrane Protein	0	0	0	1276	0	26
27	PFAM:PF07508	IPR011109	Recombinase	210	318	77.2	1.1E-21	2726953	957260	1525	0	0	0	1276	0	27
28	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	230	254			2662751	957260	5	136:Membrane Protein	0	0	0	1276	0	28
29	DeepTMHMM:TMhelix		TMhelix	231	253			2681380	957260	2056	141:DeepTMHMM: helix	0	0	0	1276	6	29
30	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	254	260			2662742	957260	18	136:Membrane Protein	0	0	0	1276	0	30
31	DeepTMHMM:outside		outside	254	261			2681381	957260	10025	0	0	0	1276	0	31
32	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	260	285			2662746	957260	5	136:Membrane Protein	0	0	0	1276	0	32
33	DeepTMHMM:TMhelix		TMhelix	262	282			2681382	957260	2056	141:DeepTMHMM: helix	0	0	0	1276	6	33
34	PFAM:PF02875	IPR004101	Mur ligase family, glutamate ligase domain	278	332	35.8	6.9E-9	2709391	957260	62	0	0	0	1276	0	34
35	SUPERFAMILY:SSF53244	IPR036615	Mur ligase, C-terminal domain superfamily	280	413			2709394	957260	65	0	0	0	1276	0	35
36	DeepTMHMM:inside		inside	283	293			2681383	957260	9730	0	0	0	1276	0	36
37	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	285	290			2662741	957260	3	136:Membrane Protein	0	0	0	1276	0	37
38	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	290	311			2662747	957260	5	136:Membrane Protein	0	0	0	1276	0	38
39	DeepTMHMM:TMhelix		TMhelix	294	303			2681384	957260	2056	141:DeepTMHMM: helix	0	0	0	1276	6	39
40	DeepTMHMM:outside		outside	304	353			2681385	957260	10025	0	0	0	1276	0	40
41	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	311	322			2662744	957260	18	136:Membrane Protein	0	0	0	1276	0	41
42	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	322	342			2662752	957260	5	136:Membrane Protein	0	0	0	1276	0	42
43	PFAM:PF13408	IPR025827	Recombinase zinc beta ribbon domain	331	385	41.9	1.0E-10	2726952	957260	1524	0	0	0	1276	0	43
44	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	342	347			2662739	957260	3	136:Membrane Protein	0	0	0	1276	0	44
45	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	347	372			2662749	957260	5	136:Membrane Protein	0	0	0	1276	0	45
46	DeepTMHMM:TMhelix		TMhelix	354	370			2681386	957260	2056	141:DeepTMHMM: helix	0	0	0	1276	6	46
47	DeepTMHMM:inside		inside	371	377			2681387	957260	9730	0	0	0	1276	0	47
48	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	372	377			2662743	957260	18	136:Membrane Protein	0	0	0	1276	0	48

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