Cellulosome Database Search

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Genome ifo

GCF_032478635.1: Clostridium sp., na [+] (ncbi)

Genbanks info:

Genbank_acc: WP_027096740.1:PROKKA_00514
Genome uid: 235
248632-250344 [+] (570)

Sequence:

NFLHKYFKKYYKMFFLAVGCVMLEVLCDLLQPTLTSIIIDDGISTNDMSMVLKYGFIMIGVSIFGAFIAINRNRVATTVA
QDFGAELRLDVFNKIQSFDFDNIDKFERGSLITRLTNDITNIQNFIYGLMRIFVRAPLLAIGCIIMSIRLDFKMALIVLT
IVPIVGGLIYLNLRYGYPYFLKVQRAIDKVNGVIREYLRGVRVVKAFNRFDFEEEKFENVNDDLTCKSIASMRFMAVFNP
IITLIVNIAIAIIIWSGARRVNLGTIQVGKIVAFINYMTQLLFALMSTTMIFSSLIRAKTSSERINEIFLEENNVKEVKD
KTYNSSEKGNIKYENVTFSYKGLKGDPIIDDISFTLEKGMTLGIVGSTGSGKTTLVNLIPRFYYAKLGRILIDGIDIRKY
TFEELRAKISIVPQKTVLFSGTIKENIRWGKEDATDDEIVEVCKIADADSFISGFNRGYDSIVGQGGSNLSGGQKQRISI
ARALIKKPEILILDDSTSALDTDTEYRIRKSLKKYSKDMTTILIAQKISSVISADKIIVLDHGKIVGEGTHDELMSNCET
YKDIYKSQQ

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:SIGNAL_PEPTIDE_N_REGION		N-terminal region of a signal peptide.	0	14			3264339	995940	21	135:all secretion /signal peptide, lipo	0	0	0	3100	3	1
2	PHOBIUS:SIGNAL_PEPTIDE		Signal peptide region	0	28			3264333	995940	19	135:all secretion /signal peptide, lipo	0	0	0	3100	3	2
3	DeepTMHMM:inside		inside	1	13			3288161	995940	9730	0	0	0	3100	0	3
4	SUPERFAMILY:SSF90123	IPR036640	ABC transporter type 1, transmembrane domain superfamily	3	310			3264343	995940	442	137:Transmembrane	0	0	0	3100	0	4
5	DeepTMHMM:TMhelix		TMhelix	14	31			3288162	995940	2056	141:DeepTMHMM: helix	0	0	0	3100	6	5
6	CDD:cd18548		ABC_6TM_Tm287_like	14	306			3264342	995940	440	0	0	0	3100	0	6
7	PHOBIUS:SIGNAL_PEPTIDE_H_REGION		Hydrophobic region of a signal peptide.	14	24			3264337	995940	24	135:all secretion /signal peptide, lipo	0	0	0	3100	3	7
8	PFAM:PF00664	IPR011527	ABC transporter transmembrane region	15	285	152.9	1.26117E-44	3264323	995940	432	137:Transmembrane	0	0	0	3100	0	8
9	PROSITE_PROFILES:PS50929	IPR011527	ABC transporter integral membrane type-1 fused domain profile.	15	298			3264341	995940	436	136:Membrane Protein	0	0	0	3100	0	9
10	PHOBIUS:SIGNAL_PEPTIDE_C_REGION		C-terminal region of a signal peptide.	24	28			3264338	995940	26	135:all secretion /signal peptide, lipo	0	0	0	3100	3	10
11	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	28	51			3264332	995940	3	136:Membrane Protein	0	0	0	3100	0	11
12	DeepTMHMM:outside		outside	32	56			3288163	995940	10025	0	0	0	3100	0	12
13	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	51	71			3264326	995940	5	136:Membrane Protein	0	0	0	3100	0	13
14	DeepTMHMM:TMhelix		TMhelix	57	78			3288164	995940	2056	141:DeepTMHMM: helix	0	0	0	3100	6	14
15	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	71	132			3264335	995940	18	136:Membrane Protein	0	0	0	3100	0	15
16	DeepTMHMM:inside		inside	79	129			3288165	995940	9730	0	0	0	3100	0	16
17	DeepTMHMM:TMhelix		TMhelix	130	150			3288166	995940	2056	141:DeepTMHMM: helix	0	0	0	3100	6	17
18	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	132	149			3264327	995940	5	136:Membrane Protein	0	0	0	3100	0	18
19	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	149	154			3264330	995940	3	136:Membrane Protein	0	0	0	3100	0	19
20	DeepTMHMM:outside		outside	151	154			3288167	995940	10025	0	0	0	3100	0	20
21	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	154	174			3264328	995940	5	136:Membrane Protein	0	0	0	3100	0	21
22	DeepTMHMM:TMhelix		TMhelix	155	178			3288168	995940	2056	141:DeepTMHMM: helix	0	0	0	3100	6	22
23	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	174	237			3264336	995940	18	136:Membrane Protein	0	0	0	3100	0	23
24	DeepTMHMM:inside		inside	179	234			3288169	995940	9730	0	0	0	3100	0	24
25	DeepTMHMM:TMhelix		TMhelix	235	255			3288170	995940	2056	141:DeepTMHMM: helix	0	0	0	3100	6	25
26	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	237	258			3264329	995940	5	136:Membrane Protein	0	0	0	3100	0	26
27	DeepTMHMM:outside		outside	256	271			3288171	995940	10025	0	0	0	3100	0	27
28	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	258	277			3264331	995940	3	136:Membrane Protein	0	0	0	3100	0	28
29	DeepTMHMM:TMhelix		TMhelix	272	297			3288172	995940	2056	141:DeepTMHMM: helix	0	0	0	3100	6	29
30	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	277	297			3264325	995940	5	136:Membrane Protein	0	0	0	3100	0	30
31	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	297	570			3264334	995940	18	136:Membrane Protein	0	0	0	3100	0	31
32	DeepTMHMM:inside		inside	298	570			3288173	995940	9730	0	0	0	3100	0	32
33	SUPERFAMILY:SSF52540	IPR027417	P-loop containing nucleoside triphosphate hydrolase	324	569			3264344	995940	78	0	0	0	3100	0	33
34	PROSITE_PROFILES:PS50893	IPR003439	ATP-binding cassette, ABC transporter-type domain profile.	331	568			3264340	995940	76	0	0	0	3100	0	34
35	PFAM:PF00005	IPR003439	ABC transporter	350	499	114.6	4.7E-33	3264324	995940	75	0	0	0	3100	0	35
36	SMART:SM00382	IPR003593		358	545			3264322	995940	1	0	0	0	3100	0	36

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