Cellulosome Database Gene Detail

HCIAFFOI_01484 Locus tags: • Sequence Length: 416

Ruminococcus albus_7, DSM 20455 GCF_000179635.2

Show complete sequence

Click domain (colored bar) to show sequence

    [SP]_[PF00404]_[PF14220]_[TM]

    [SP]_[34:PF00404]_[233:PF14220]_[TM]

    [SP]_[29:IPR016134]_[32:IPR036439]_[34:IPR002105]_[95:IPR001480]_[95:IPR001480]_[103:IPR036426]_[233:IPR025479]_[TM]

Looking for similar signatures in the working genomes

PF00404:Dockerin_1. Dockerin type I domain

Found 27 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_014522594.1:LOMAGDGF_00651	1288-1341
Acetivibrio alkalicellulosi, DSM 17461	2510060822:NJMEOJLD_01063	1-42
	2510062226:NJMEOJLD_02426	155-177
	2510062800:NJMEOJLD_02993	2027-2083
Pseudobacteroides cellulosolvens, DSM 2933	WP_050752998.1:NEIHKHHH_00461	97-148
	WP_036946480.1:NEIHKHHH_00478	13-69
	WP_036943995.1:NEIHKHHH_00551	129-173
	WP_050753071.1:NEIHKHHH_00820	116-171
	WP_050753111.1:NEIHKHHH_00935	597-651
	NEIHKHHH_01207	117-168
	WP_036945773.1:NEIHKHHH_01261	673-728
	WP_050753224.1:NEIHKHHH_01469	115-171
	WP_050753260.1:NEIHKHHH_01688	128-184
	WP_082225132.1:NEIHKHHH_01754	536-586
	WP_036944505.1:NEIHKHHH_02505	346-399
	WP_036942631.1:NEIHKHHH_02616	503-554
	WP_036944080.1:NEIHKHHH_02762	867-923
	NEIHKHHH_03158	209-259
	WP_050753563.1:NEIHKHHH_03492	187-241
	WP_036937628.1:NEIHKHHH_04191	31-82
	WP_050753775.1:NEIHKHHH_04930	812-867
	WP_081927234.1:NEIHKHHH_05221	341-390
	WP_050753851.1:NEIHKHHH_05337	120-171
	WP_050753935.1:NEIHKHHH_05706	596-647
Ruminococcus albus_7, DSM 20455	WP_013498114.1:HCIAFFOI_01484	34-85
Paenibacillus guangzhouensis, KCTC 33171	WP_152396572.1:KDFAKKPF_05773	409-460
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_137697840.1:PROKKA_02529	820-874

PF14220:DUF4329. Domain of unknown function (DUF4329)

Found 8 similar signatures

Acetivibrio thermocellus, DSM 1313	WP_003523036.1:LOMAGDGF_00910	1793-1906
Pseudobacteroides cellulosolvens, DSM 2933	WP_050754003.1:NEIHKHHH_05942	116-231
Ruminococcus albus_7, DSM 20455	WP_013498114.1:HCIAFFOI_01484	233-349
FD_MS_7_1, AnGL28	AnGL28_01480	314-417
FD_SO4_37_1, AnGL2	AnGL2_00609	314-417
Variovorax paradoxus, 2u118	PaGL#32_00286	21-139
Variovorax paradoxus, SPNA7	PaGL#43_00253	21-139
MPOB, Sfum	Sfum_01107	52-155

Search by locus tag: Search

↑ Top