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NEIHKHHH_03492 Locus tags: • Sequence Length: 688

Pseudobacteroides cellulosolvens, DSM 2933 GCF_001262605.1

Adaptor Scaffoldin

5050100100150150200200250250300300350350400400450450500500550550600600650650700700
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NEIHKHHH_03488 NEIHKHHH_03489 NEIHKHHH_03490 NEIHKHHH_03492 
    [SP]_[PF00963]_[PF00404]_[PF13517]_[PF13517]_[PF13517]_[TM]

    [SP]_[43:PF00963]_[187:PF00404]_[295:PF13517]_[405:PF13517]_[515:PF13517]_[TM]

    [SP]_[42:IPR008965]_[43:IPR002102]_[182:IPR016134]_[185:IPR036439]_[187:IPR002105]_[292:IPR028994]_[295:IPR013517]_[405:IPR013517]_[515:IPR013517]_[TM]

Looking for similar signatures in the working genomes

PF00963:Cohesin. Cohesin domain

Found 234 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_014522594.1:LOMAGDGF_0065130-167
184-321
555-696
719-859
884-1024
1048-1188
WP_014522595.1:LOMAGDGF_0065233-168
204-340
408-542
610-739
WP_003519375.1:LOMAGDGF_0065335-174
206-335
WP_003519374.1:LOMAGDGF_0065433-172
WP_003516982.1:LOMAGDGF_0098533-168
WP_003516263.1:LOMAGDGF_0153441-175
217-353
418-552
611-746
804-939
974-1110
1144-1279
WP_003516262.1:LOMAGDGF_01535107-242
WP_235825069.1:LOMAGDGF_01825119-241
Clostridium acetobutylicum, DSM 1731 WP_010964228.1:FHOCHPCF_00957382-520
615-754
859-997
1102-1240
1344-1482
WP_010964232.1:FHOCHPCF_0096141-180
Acetivibrio alkalicellulosi, DSM 17461 2510060007:NJMEOJLD_0026534-141
186-241
2510060190:NJMEOJLD_0044438-173
2510060338:NJMEOJLD_0058634-83
2510060361:NJMEOJLD_0060936-170
207-341
384-519
563-695
2510060362:NJMEOJLD_00610110-249
2510060389:NJMEOJLD_00637244-354
2510061487:NJMEOJLD_01711402-457
2510061752:NJMEOJLD_0196735-140
186-299
2510062037:NJMEOJLD_0224535-147
168-302
308-423
2510062642:NJMEOJLD_02838673-780
913-1037
2510062796:NJMEOJLD_0298933-169
2510062797:NJMEOJLD_0299034-170
NJMEOJLD_029919-146
158-288
2510062799:NJMEOJLD_0299232-167
202-336
371-505
2510062800:NJMEOJLD_0299334-168
198-332
367-501
532-666
903-1040
1056-1192
1232-1369
1409-1546
1596-1733
1781-1918
2510062939:NJMEOJLD_03125133-254
2510063022:NJMEOJLD_0320839-151
188-292
2510063232:NJMEOJLD_0341836-173
196-304
347-470
2510063299:NJMEOJLD_0348540-175
198-311
2510063692:NJMEOJLD_0387047-171
2510063937:NJMEOJLD_04109111-232
Pseudobacteroides cellulosolvens, DSM 2933 WP_050752983.1:NEIHKHHH_0033837-161
WP_050753121.1:NEIHKHHH_0103443-170
WP_036940409.1:NEIHKHHH_0103540-183
WP_036940412.1:NEIHKHHH_0103633-168
WP_036943826.1:NEIHKHHH_0140373-207
245-375
412-548
584-713
764-894
944-1080
1126-1257
1303-1434
1477-1609
1639-1766
WP_036943809.1:NEIHKHHH_01413289-380
WP_036941393.1:NEIHKHHH_01685150-261
WP_036937916.1:NEIHKHHH_0182440-158
191-309
384-505
WP_050753288.1:NEIHKHHH_01831570-674
WP_036938069.1:NEIHKHHH_01898164-298
WP_050753330.1:NEIHKHHH_0206734-171
181-318
351-491
496-636
681-806
860-998
1041-1181
1318-1458
1549-1688
1744-1884
WP_050753331.1:NEIHKHHH_0206832-170
224-362
408-546
589-727
771-908
1151-1290
1321-1453
1493-1629
1678-1814
1870-2007
2070-2210
WP_036947391.1:NEIHKHHH_02300146-266
325-433
WP_050753370.1:NEIHKHHH_02301114-250
319-455
511-628
WP_050753371.1:NEIHKHHH_0230234-161
WP_036941772.1:NEIHKHHH_02347512-608
WP_036945445.1:NEIHKHHH_029531068-1166
WP_036944741.1:NEIHKHHH_0295733-160
WP_036944739.1:NEIHKHHH_0295837-152
WP_036944738.1:NEIHKHHH_0295936-149
249-358
WP_050753468.1:NEIHKHHH_0296137-157
WP_036944734.1:NEIHKHHH_0296331-165
WP_036944733.1:NEIHKHHH_0296437-153
248-350
414-553
WP_036945658.1:NEIHKHHH_032301063-1194
WP_050753563.1:NEIHKHHH_0349243-184
WP_050753599.1:NEIHKHHH_0371530-166
184-303
347-484
504-638
682-807
876-1015
1032-1160
WP_050753639.1:NEIHKHHH_04008213-344
445-576
WP_036937628.1:NEIHKHHH_04191100-231
WP_050753749.1:NEIHKHHH_04754243-375
441-574
634-767
840-973
WP_050753797.1:NEIHKHHH_050711424-1517
WP_036945212.1:NEIHKHHH_0547232-171
WP_036945220.1:NEIHKHHH_0547644-180
WP_050753883.1:NEIHKHHH_054781050-1167
Paenibacillus guangzhouensis, KCTC 33171 WP_152391660.1:KDFAKKPF_00049267-379
WP_152392021.1:KDFAKKPF_00451192-323
WP_193726735.1:KDFAKKPF_004521976-2104
WP_152392023.1:KDFAKKPF_004531322-1441
WP_152392027.1:KDFAKKPF_004571704-1833
WP_193726741.1:KDFAKKPF_005221285-1409
WP_152392087.1:KDFAKKPF_005231285-1409
WP_152392088.1:KDFAKKPF_005241680-1804
WP_152392094.1:KDFAKKPF_00531787-917
WP_227793601.1:KDFAKKPF_011661520-1640
WP_152392644.1:KDFAKKPF_01167752-877
KDFAKKPF_01505910-1041
WP_193726830.1:KDFAKKPF_0168237-156
WP_227793613.1:KDFAKKPF_017821023-1156
WP_227793500.1:KDFAKKPF_01784395-522
WP_227793624.1:KDFAKKPF_02068832-968
WP_152393458.1:KDFAKKPF_02112945-1070
WP_152393505.1:KDFAKKPF_021701106-1236
WP_152393581.1:KDFAKKPF_0225832-147
WP_152393582.1:KDFAKKPF_022591314-1443
WP_193726878.1:KDFAKKPF_022601133-1262
WP_227793639.1:KDFAKKPF_032871842-1966
WP_152394480.1:KDFAKKPF_03294978-1109
WP_227793642.1:KDFAKKPF_033341524-1632
WP_193726518.1:KDFAKKPF_0339434-140
243-378
WP_193726531.1:KDFAKKPF_03596965-1095
WP_152395021.1:KDFAKKPF_03924774-885
WP_152395201.1:KDFAKKPF_041291126-1249
WP_193726646.1:KDFAKKPF_054321087-1211
WP_152396571.1:KDFAKKPF_0577234-145
WP_152396573.1:KDFAKKPF_05774878-1001
WP_193727025.1:KDFAKKPF_063011702-1827
Clostridium acetobutylicum, ATCC 824 WP_010964228.1:OJAMHIDJ_00960382-520
615-754
859-997
1102-1240
1344-1482
WP_010964232.1:OJAMHIDJ_0096441-180
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_190530455.1:PROKKA_00348285-421
431-567
577-713
723-859
869-1005
1015-1151
1161-1297
1394-1528
1884-2019
2027-2163
2171-2307
2408-2545
2644-2781
2792-2928
WP_137699049.1:PROKKA_0035378-216
WP_171003656.1:PROKKA_00363282-419
513-651
745-883
978-1116
1211-1346
1708-1840
WP_190530457.1:PROKKA_00365281-414
514-642
738-874
882-1020
1203-1340
1346-1485
1754-1891
WP_190530459.1:PROKKA_00366281-418
513-647
744-882
888-1027
1210-1348
WP_171003596.1:PROKKA_00800217-336
WP_171003469.1:PROKKA_0218171-208
Terrisporobacter hibernicus, AnGL54 AnGL54_0228868-204
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0309168-204
Niallia taxi, AG-1 PaGL#37_0335031-168
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11359:Spalm_01947576-697
713-835
Ruminococcus callidus, ATCC 27760 Rcal_0015233-153
Rcal_01096247-299

PF00404:Dockerin_1. Dockerin type I domain

Found 27 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_014522594.1:LOMAGDGF_006511288-1341
Acetivibrio alkalicellulosi, DSM 17461 2510060822:NJMEOJLD_010631-42
2510062226:NJMEOJLD_02426155-177
2510062800:NJMEOJLD_029932027-2083
Pseudobacteroides cellulosolvens, DSM 2933 WP_050752998.1:NEIHKHHH_0046197-148
WP_036946480.1:NEIHKHHH_0047813-69
WP_036943995.1:NEIHKHHH_00551129-173
WP_050753071.1:NEIHKHHH_00820116-171
WP_050753111.1:NEIHKHHH_00935597-651
NEIHKHHH_01207117-168
WP_036945773.1:NEIHKHHH_01261673-728
WP_050753224.1:NEIHKHHH_01469115-171
WP_050753260.1:NEIHKHHH_01688128-184
WP_082225132.1:NEIHKHHH_01754536-586
WP_036944505.1:NEIHKHHH_02505346-399
WP_036942631.1:NEIHKHHH_02616503-554
WP_036944080.1:NEIHKHHH_02762867-923
NEIHKHHH_03158209-259
WP_050753563.1:NEIHKHHH_03492187-241
WP_036937628.1:NEIHKHHH_0419131-82
WP_050753775.1:NEIHKHHH_04930812-867
WP_081927234.1:NEIHKHHH_05221341-390
WP_050753851.1:NEIHKHHH_05337120-171
WP_050753935.1:NEIHKHHH_05706596-647
Ruminococcus albus_7, DSM 20455 WP_013498114.1:HCIAFFOI_0148434-85
Paenibacillus guangzhouensis, KCTC 33171 WP_152396572.1:KDFAKKPF_05773409-460
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697840.1:PROKKA_02529820-874

PF13517:FG-GAP_3. FG-GAP-like repeat

Found 137 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_014519117.1:FHOCHPCF_0395290-158
386-454
WP_010966226.1:FHOCHPCF_0299059-130
235-305
WP_013913602.1:FHOCHPCF_02991117-187
235-306
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753563.1:NEIHKHHH_03492295-361
405-471
515-581
Clostridium acetobutylicum, ATCC 824 WP_010966226.1:OJAMHIDJ_0299959-130
235-305
WP_010966227.1:OJAMHIDJ_03000117-187
235-306
WP_014519117.1:OJAMHIDJ_0396590-158
386-454
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697507.1:PROKKA_0055223-92
FD_MS_7_1, AnGL28 AnGL28_00583118-179
AnGL28_03241206-265
457-528
FD_SO4_37_1, AnGL2 AnGL2_02371206-265
457-528
AnGL2_03262118-179
FD_YE_37_3, AnGL26 AnGL26_00362296-367
578-643
AnGL26_00386309-379
510-587
AnGL26_01022613-679
FD_YE_37_8_2, AnGL3 AnGL3_02317401-463
Syntrophus buswellii, Sbus Sbus_0129334-94
230-290
Sbus_01694239-299
Sbus_0209330-91
128-189
Sbus_0258426-86
222-283
Sunxiuqinia elliptica, AnGL22 AnGL22_00363296-367
578-643
AnGL22_00387309-379
510-587
AnGL22_01023613-679
FD-MS-7-8, AnGL9 AnGL9_00856109-171
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0101644-109
116-165
225-288
681-751
798-859
PaGL#35_02595265-336
384-452
476-523
PaGL#35_03488298-361
408-478
PaGL#35_0349078-145
154-201
261-324
361-407
712-785
830-892
PaGL#35_04572301-364
PaGL#35_05260431-484
PaGL#35_05582305-368
PaGL#35_05583310-373
PaGL#35_0558513-77
203-266
685-756
808-871
Geodermatophilus sp., RDM14 PaGL#36_02848316-384
PaGL#36_02849307-376
Micromonospora inositola, Utrum1 PaGL#61_00001289-364
PaGL#61_04955807-874
MPOB, Sfum 639702386:Sfum_01668164-226
293-361
439-486
639702387:Sfum_01669288-355
395-458
496-563
639702392:Sfum_01674139-201
264-332
639704450:Sfum_03766150-218
364-428
Syntrophus aciditrophicus, SB 637859555:SYN_01154239-299
Syntrophus gentianae, DSM8423 Ga0074853_10813:Sgen_01320230-289
Ga0074853_11281:Sgen_01845239-299
Mucilaginibacter gossypii, cycad 4 PaGL#42_0037563-127
253-316
732-803
855-918
PaGL#42_00377310-373
PaGL#42_00378302-365
PaGL#42_01015441-510
PaGL#42_01436120-189
249-312
654-719
733-778
827-886
PaGL#42_0143782-146
155-202
262-325
728-796
846-907
PaGL#42_0153865-129
255-318
399-495
719-790
842-905
PaGL#42_01539299-370
418-486
509-557
PaGL#42_01989314-378
479-544
PaGL#42_0240279-146
156-202
262-324
362-408
453-498
663-725
740-786
831-893
PaGL#42_02404300-363
PaGL#42_0258352-94
PaGL#42_0258463-127
252-315
447-492
719-790
842-905
PaGL#42_0368272-136
256-319
718-789
837-897
PaGL#42_04472284-355
403-471
495-542
PaGL#42_0548485-150
274-337
372-420
460-509
671-735
784-856

PF13517:FG-GAP_3. FG-GAP-like repeat

Found 137 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_014519117.1:FHOCHPCF_0395290-158
386-454
WP_010966226.1:FHOCHPCF_0299059-130
235-305
WP_013913602.1:FHOCHPCF_02991117-187
235-306
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753563.1:NEIHKHHH_03492295-361
405-471
515-581
Clostridium acetobutylicum, ATCC 824 WP_010966226.1:OJAMHIDJ_0299959-130
235-305
WP_010966227.1:OJAMHIDJ_03000117-187
235-306
WP_014519117.1:OJAMHIDJ_0396590-158
386-454
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697507.1:PROKKA_0055223-92
FD_MS_7_1, AnGL28 AnGL28_00583118-179
AnGL28_03241206-265
457-528
FD_SO4_37_1, AnGL2 AnGL2_02371206-265
457-528
AnGL2_03262118-179
FD_YE_37_3, AnGL26 AnGL26_00362296-367
578-643
AnGL26_00386309-379
510-587
AnGL26_01022613-679
FD_YE_37_8_2, AnGL3 AnGL3_02317401-463
Syntrophus buswellii, Sbus Sbus_0129334-94
230-290
Sbus_01694239-299
Sbus_0209330-91
128-189
Sbus_0258426-86
222-283
Sunxiuqinia elliptica, AnGL22 AnGL22_00363296-367
578-643
AnGL22_00387309-379
510-587
AnGL22_01023613-679
FD-MS-7-8, AnGL9 AnGL9_00856109-171
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0101644-109
116-165
225-288
681-751
798-859
PaGL#35_02595265-336
384-452
476-523
PaGL#35_03488298-361
408-478
PaGL#35_0349078-145
154-201
261-324
361-407
712-785
830-892
PaGL#35_04572301-364
PaGL#35_05260431-484
PaGL#35_05582305-368
PaGL#35_05583310-373
PaGL#35_0558513-77
203-266
685-756
808-871
Geodermatophilus sp., RDM14 PaGL#36_02848316-384
PaGL#36_02849307-376
Micromonospora inositola, Utrum1 PaGL#61_00001289-364
PaGL#61_04955807-874
MPOB, Sfum 639702386:Sfum_01668164-226
293-361
439-486
639702387:Sfum_01669288-355
395-458
496-563
639702392:Sfum_01674139-201
264-332
639704450:Sfum_03766150-218
364-428
Syntrophus aciditrophicus, SB 637859555:SYN_01154239-299
Syntrophus gentianae, DSM8423 Ga0074853_10813:Sgen_01320230-289
Ga0074853_11281:Sgen_01845239-299
Mucilaginibacter gossypii, cycad 4 PaGL#42_0037563-127
253-316
732-803
855-918
PaGL#42_00377310-373
PaGL#42_00378302-365
PaGL#42_01015441-510
PaGL#42_01436120-189
249-312
654-719
733-778
827-886
PaGL#42_0143782-146
155-202
262-325
728-796
846-907
PaGL#42_0153865-129
255-318
399-495
719-790
842-905
PaGL#42_01539299-370
418-486
509-557
PaGL#42_01989314-378
479-544
PaGL#42_0240279-146
156-202
262-324
362-408
453-498
663-725
740-786
831-893
PaGL#42_02404300-363
PaGL#42_0258352-94
PaGL#42_0258463-127
252-315
447-492
719-790
842-905
PaGL#42_0368272-136
256-319
718-789
837-897
PaGL#42_04472284-355
403-471
495-542
PaGL#42_0548485-150
274-337
372-420
460-509
671-735
784-856

PF13517:FG-GAP_3. FG-GAP-like repeat

Found 137 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_014519117.1:FHOCHPCF_0395290-158
386-454
WP_010966226.1:FHOCHPCF_0299059-130
235-305
WP_013913602.1:FHOCHPCF_02991117-187
235-306
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753563.1:NEIHKHHH_03492295-361
405-471
515-581
Clostridium acetobutylicum, ATCC 824 WP_010966226.1:OJAMHIDJ_0299959-130
235-305
WP_010966227.1:OJAMHIDJ_03000117-187
235-306
WP_014519117.1:OJAMHIDJ_0396590-158
386-454
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697507.1:PROKKA_0055223-92
FD_MS_7_1, AnGL28 AnGL28_00583118-179
AnGL28_03241206-265
457-528
FD_SO4_37_1, AnGL2 AnGL2_02371206-265
457-528
AnGL2_03262118-179
FD_YE_37_3, AnGL26 AnGL26_00362296-367
578-643
AnGL26_00386309-379
510-587
AnGL26_01022613-679
FD_YE_37_8_2, AnGL3 AnGL3_02317401-463
Syntrophus buswellii, Sbus Sbus_0129334-94
230-290
Sbus_01694239-299
Sbus_0209330-91
128-189
Sbus_0258426-86
222-283
Sunxiuqinia elliptica, AnGL22 AnGL22_00363296-367
578-643
AnGL22_00387309-379
510-587
AnGL22_01023613-679
FD-MS-7-8, AnGL9 AnGL9_00856109-171
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0101644-109
116-165
225-288
681-751
798-859
PaGL#35_02595265-336
384-452
476-523
PaGL#35_03488298-361
408-478
PaGL#35_0349078-145
154-201
261-324
361-407
712-785
830-892
PaGL#35_04572301-364
PaGL#35_05260431-484
PaGL#35_05582305-368
PaGL#35_05583310-373
PaGL#35_0558513-77
203-266
685-756
808-871
Geodermatophilus sp., RDM14 PaGL#36_02848316-384
PaGL#36_02849307-376
Micromonospora inositola, Utrum1 PaGL#61_00001289-364
PaGL#61_04955807-874
MPOB, Sfum 639702386:Sfum_01668164-226
293-361
439-486
639702387:Sfum_01669288-355
395-458
496-563
639702392:Sfum_01674139-201
264-332
639704450:Sfum_03766150-218
364-428
Syntrophus aciditrophicus, SB 637859555:SYN_01154239-299
Syntrophus gentianae, DSM8423 Ga0074853_10813:Sgen_01320230-289
Ga0074853_11281:Sgen_01845239-299
Mucilaginibacter gossypii, cycad 4 PaGL#42_0037563-127
253-316
732-803
855-918
PaGL#42_00377310-373
PaGL#42_00378302-365
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