SMPP Home

NJMEOJLD_03125 Locus tags: • Sequence Length: 1621

Acetivibrio alkalicellulosi, DSM 17461 Gs0011839

Anchoring Scaffoldin

1001002002003003004004005005006006007007008008009009001000100011001100120012001300130014001400150015001600160017001700
Show complete sequence
Click domain (colored bar) to show sequence
NJMEOJLD_03125 NJMEOJLD_03127 NJMEOJLD_03130
    [SP]_[PF00963]_[PF18884]_[PF18884]_[PF00092]_[TM]

    [SP]_[133:PF00963]_[783:PF18884]_[800:PF18884]_[979:PF00092]_[TM]

    [SP]_[50:IPR016134]_[52:IPR036439]_[129:IPR008965]_[133:IPR002102]_[674:IPR036116]_[676:IPR003961]_[678:IPR003961]_[977:IPR002035]_[978:IPR036465]_[979:IPR002035]_[979:IPR002035]_[TM]
    

Looking for similar signatures in the working genomes

PF00963:Cohesin. Cohesin domain

Found 234 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_014522594.1:LOMAGDGF_0065130-167
184-321
555-696
719-859
884-1024
1048-1188
WP_014522595.1:LOMAGDGF_0065233-168
204-340
408-542
610-739
WP_003519375.1:LOMAGDGF_0065335-174
206-335
WP_003519374.1:LOMAGDGF_0065433-172
WP_003516982.1:LOMAGDGF_0098533-168
WP_003516263.1:LOMAGDGF_0153441-175
217-353
418-552
611-746
804-939
974-1110
1144-1279
WP_003516262.1:LOMAGDGF_01535107-242
WP_235825069.1:LOMAGDGF_01825119-241
Clostridium acetobutylicum, DSM 1731 WP_010964228.1:FHOCHPCF_00957382-520
615-754
859-997
1102-1240
1344-1482
WP_010964232.1:FHOCHPCF_0096141-180
Acetivibrio alkalicellulosi, DSM 17461 2510060007:NJMEOJLD_0026534-141
186-241
2510060190:NJMEOJLD_0044438-173
2510060338:NJMEOJLD_0058634-83
2510060361:NJMEOJLD_0060936-170
207-341
384-519
563-695
2510060362:NJMEOJLD_00610110-249
2510060389:NJMEOJLD_00637244-354
2510061487:NJMEOJLD_01711402-457
2510061752:NJMEOJLD_0196735-140
186-299
2510062037:NJMEOJLD_0224535-147
168-302
308-423
2510062642:NJMEOJLD_02838673-780
913-1037
2510062796:NJMEOJLD_0298933-169
2510062797:NJMEOJLD_0299034-170
NJMEOJLD_029919-146
158-288
2510062799:NJMEOJLD_0299232-167
202-336
371-505
2510062800:NJMEOJLD_0299334-168
198-332
367-501
532-666
903-1040
1056-1192
1232-1369
1409-1546
1596-1733
1781-1918
2510062939:NJMEOJLD_03125133-254
2510063022:NJMEOJLD_0320839-151
188-292
2510063232:NJMEOJLD_0341836-173
196-304
347-470
2510063299:NJMEOJLD_0348540-175
198-311
2510063692:NJMEOJLD_0387047-171
2510063937:NJMEOJLD_04109111-232
Pseudobacteroides cellulosolvens, DSM 2933 WP_050752983.1:NEIHKHHH_0033837-161
WP_050753121.1:NEIHKHHH_0103443-170
WP_036940409.1:NEIHKHHH_0103540-183
WP_036940412.1:NEIHKHHH_0103633-168
WP_036943826.1:NEIHKHHH_0140373-207
245-375
412-548
584-713
764-894
944-1080
1126-1257
1303-1434
1477-1609
1639-1766
WP_036943809.1:NEIHKHHH_01413289-380
WP_036941393.1:NEIHKHHH_01685150-261
WP_036937916.1:NEIHKHHH_0182440-158
191-309
384-505
WP_050753288.1:NEIHKHHH_01831570-674
WP_036938069.1:NEIHKHHH_01898164-298
WP_050753330.1:NEIHKHHH_0206734-171
181-318
351-491
496-636
681-806
860-998
1041-1181
1318-1458
1549-1688
1744-1884
WP_050753331.1:NEIHKHHH_0206832-170
224-362
408-546
589-727
771-908
1151-1290
1321-1453
1493-1629
1678-1814
1870-2007
2070-2210
WP_036947391.1:NEIHKHHH_02300146-266
325-433
WP_050753370.1:NEIHKHHH_02301114-250
319-455
511-628
WP_050753371.1:NEIHKHHH_0230234-161
WP_036941772.1:NEIHKHHH_02347512-608
WP_036945445.1:NEIHKHHH_029531068-1166
WP_036944741.1:NEIHKHHH_0295733-160
WP_036944739.1:NEIHKHHH_0295837-152
WP_036944738.1:NEIHKHHH_0295936-149
249-358
WP_050753468.1:NEIHKHHH_0296137-157
WP_036944734.1:NEIHKHHH_0296331-165
WP_036944733.1:NEIHKHHH_0296437-153
248-350
414-553
WP_036945658.1:NEIHKHHH_032301063-1194
WP_050753563.1:NEIHKHHH_0349243-184
WP_050753599.1:NEIHKHHH_0371530-166
184-303
347-484
504-638
682-807
876-1015
1032-1160
WP_050753639.1:NEIHKHHH_04008213-344
445-576
WP_036937628.1:NEIHKHHH_04191100-231
WP_050753749.1:NEIHKHHH_04754243-375
441-574
634-767
840-973
WP_050753797.1:NEIHKHHH_050711424-1517
WP_036945212.1:NEIHKHHH_0547232-171
WP_036945220.1:NEIHKHHH_0547644-180
WP_050753883.1:NEIHKHHH_054781050-1167
Paenibacillus guangzhouensis, KCTC 33171 WP_152391660.1:KDFAKKPF_00049267-379
WP_152392021.1:KDFAKKPF_00451192-323
WP_193726735.1:KDFAKKPF_004521976-2104
WP_152392023.1:KDFAKKPF_004531322-1441
WP_152392027.1:KDFAKKPF_004571704-1833
WP_193726741.1:KDFAKKPF_005221285-1409
WP_152392087.1:KDFAKKPF_005231285-1409
WP_152392088.1:KDFAKKPF_005241680-1804
WP_152392094.1:KDFAKKPF_00531787-917
WP_227793601.1:KDFAKKPF_011661520-1640
WP_152392644.1:KDFAKKPF_01167752-877
KDFAKKPF_01505910-1041
WP_193726830.1:KDFAKKPF_0168237-156
WP_227793613.1:KDFAKKPF_017821023-1156
WP_227793500.1:KDFAKKPF_01784395-522
WP_227793624.1:KDFAKKPF_02068832-968
WP_152393458.1:KDFAKKPF_02112945-1070
WP_152393505.1:KDFAKKPF_021701106-1236
WP_152393581.1:KDFAKKPF_0225832-147
WP_152393582.1:KDFAKKPF_022591314-1443
WP_193726878.1:KDFAKKPF_022601133-1262
WP_227793639.1:KDFAKKPF_032871842-1966
WP_152394480.1:KDFAKKPF_03294978-1109
WP_227793642.1:KDFAKKPF_033341524-1632
WP_193726518.1:KDFAKKPF_0339434-140
243-378
WP_193726531.1:KDFAKKPF_03596965-1095
WP_152395021.1:KDFAKKPF_03924774-885
WP_152395201.1:KDFAKKPF_041291126-1249
WP_193726646.1:KDFAKKPF_054321087-1211
WP_152396571.1:KDFAKKPF_0577234-145
WP_152396573.1:KDFAKKPF_05774878-1001
WP_193727025.1:KDFAKKPF_063011702-1827
Clostridium acetobutylicum, ATCC 824 WP_010964228.1:OJAMHIDJ_00960382-520
615-754
859-997
1102-1240
1344-1482
WP_010964232.1:OJAMHIDJ_0096441-180
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_190530455.1:PROKKA_00348285-421
431-567
577-713
723-859
869-1005
1015-1151
1161-1297
1394-1528
1884-2019
2027-2163
2171-2307
2408-2545
2644-2781
2792-2928
WP_137699049.1:PROKKA_0035378-216
WP_171003656.1:PROKKA_00363282-419
513-651
745-883
978-1116
1211-1346
1708-1840
WP_190530457.1:PROKKA_00365281-414
514-642
738-874
882-1020
1203-1340
1346-1485
1754-1891
WP_190530459.1:PROKKA_00366281-418
513-647
744-882
888-1027
1210-1348
WP_171003596.1:PROKKA_00800217-336
WP_171003469.1:PROKKA_0218171-208
Terrisporobacter hibernicus, AnGL54 AnGL54_0228868-204
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0309168-204
Niallia taxi, AG-1 PaGL#37_0335031-168
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11359:Spalm_01947576-697
713-835
Ruminococcus callidus, ATCC 27760 Rcal_0015233-153
Rcal_01096247-299

PF18884:TSP3_bac. Bacterial TSP3 repeat

Found 100 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516160.1:LOMAGDGF_00709387-409
410-432
433-448
498-520
555-578
578-599
Acetivibrio alkalicellulosi, DSM 17461 2510062939:NJMEOJLD_03125783-799
800-823
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753547.1:NEIHKHHH_03406288-311
311-330
Ruminococcus albus_7, DSM 20455 WP_013483297.1:HCIAFFOI_03386131-153
WP_013497501.1:HCIAFFOI_00820378-398
435-456
458-480
WP_080557271.1:HCIAFFOI_01472453-475
WP_013499416.1:HCIAFFOI_02919102-124
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696147.1:PROKKA_01888106-124
128-150
FD_25_22, AnGL7 AnGL7_03457460-482
FD_MS_7_1, AnGL28 AnGL28_00272151-163
279-300
301-321
791-806
840-856
872-886
969-989
AnGL28_00295103-119
130-150
AnGL28_00667562-582
586-605
1034-1056
AnGL28_013271537-1552
1566-1587
AnGL28_03348130-142
233-243
258-277
280-301
310-330
FD_SO4_37_1, AnGL2 AnGL2_004571537-1552
1566-1587
AnGL2_02478130-142
233-243
258-277
280-301
310-330
AnGL2_02951151-163
279-300
301-321
791-806
840-856
872-886
969-989
AnGL2_02974103-119
130-150
AnGL2_03346562-582
586-605
1034-1056
FD_YE_37_3, AnGL26 AnGL26_019941543-1565
FD-25-21, AnGL21 AnGL21_00515346-367
AnGL21_02815460-482
Sunxiuqinia elliptica, AnGL22 AnGL22_019911543-1565
FD-MS-7-8, AnGL9 AnGL9_00838452-474
AnGL9_01933723-743
746-767
AnGL9_021272681-2703
AnGL9_02464555-575
581-595
606-623
AnGL9_025181041-1062
AnGL9_02563450-472
AnGL9_02667256-278
279-299
305-327
328-349
697-717
723-744
772-793
821-843
844-866
867-888
890-912
913-935
936-958
AnGL9_02668565-586
587-608
610-630
633-655
682-705
705-724
1035-1056
1058-1079
1081-1102
1896-1916
1919-1938
2274-2294
2300-2321
2326-2346
2349-2369
2375-2395
2398-2418

PF18884:TSP3_bac. Bacterial TSP3 repeat

Found 100 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516160.1:LOMAGDGF_00709387-409
410-432
433-448
498-520
555-578
578-599
Acetivibrio alkalicellulosi, DSM 17461 2510062939:NJMEOJLD_03125783-799
800-823
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753547.1:NEIHKHHH_03406288-311
311-330
Ruminococcus albus_7, DSM 20455 WP_013483297.1:HCIAFFOI_03386131-153
WP_013497501.1:HCIAFFOI_00820378-398
435-456
458-480
WP_080557271.1:HCIAFFOI_01472453-475
WP_013499416.1:HCIAFFOI_02919102-124
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696147.1:PROKKA_01888106-124
128-150
FD_25_22, AnGL7 AnGL7_03457460-482
FD_MS_7_1, AnGL28 AnGL28_00272151-163
279-300
301-321
791-806
840-856
872-886
969-989
AnGL28_00295103-119
130-150
AnGL28_00667562-582
586-605
1034-1056
AnGL28_013271537-1552
1566-1587
AnGL28_03348130-142
233-243
258-277
280-301
310-330
FD_SO4_37_1, AnGL2 AnGL2_004571537-1552
1566-1587
AnGL2_02478130-142
233-243
258-277
280-301
310-330
AnGL2_02951151-163
279-300
301-321
791-806
840-856
872-886
969-989
AnGL2_02974103-119
130-150
AnGL2_03346562-582
586-605
1034-1056
FD_YE_37_3, AnGL26 AnGL26_019941543-1565
FD-25-21, AnGL21 AnGL21_00515346-367
AnGL21_02815460-482
Sunxiuqinia elliptica, AnGL22 AnGL22_019911543-1565
FD-MS-7-8, AnGL9 AnGL9_00838452-474
AnGL9_01933723-743
746-767
AnGL9_021272681-2703
AnGL9_02464555-575
581-595
606-623
AnGL9_025181041-1062
AnGL9_02563450-472
AnGL9_02667256-278
279-299
305-327
328-349
697-717
723-744
772-793
821-843
844-866
867-888
890-912
913-935
936-958
AnGL9_02668565-586
587-608
610-630
633-655
682-705
705-724
1035-1056
1058-1079
1081-1102
1896-1916
1919-1938
2274-2294
2300-2321
2326-2346
2349-2369
2375-2395
2398-2418

PF00092:VWA. von Willebrand factor type A domain

Found 226 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003511548.1:LOMAGDGF_00649183-345
WP_003511665.1:LOMAGDGF_00718393-550
WP_003517483.1:LOMAGDGF_01037721-821
Clostridium acetobutylicum, DSM 1731 WP_010963795.1:FHOCHPCF_00518512-669
Acetivibrio alkalicellulosi, DSM 17461 2510060522:NJMEOJLD_0076967-163
407-574
2510060523:NJMEOJLD_0077089-190
2510061024:NJMEOJLD_01256421-513
2510061276:NJMEOJLD_01505393-551
2510062856:NJMEOJLD_03045557-705
2510062939:NJMEOJLD_03125979-1137
2510063187:NJMEOJLD_0337583-275
2510063188:NJMEOJLD_0337683-220
2510063762:NJMEOJLD_03939555-757
2510063764:NJMEOJLD_03941562-765
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943811.1:NEIHKHHH_0141283-215
WP_036937909.1:NEIHKHHH_018211509-1710
WP_050753547.1:NEIHKHHH_03406468-636
WP_036936484.1:NEIHKHHH_0400283-226
250-269
WP_036936480.1:NEIHKHHH_0400383-274
WP_036937571.1:NEIHKHHH_04218321-493
WP_050753838.1:NEIHKHHH_05254174-345
WP_036940050.1:NEIHKHHH_05764392-488
Ruminococcus albus_7, DSM 20455 WP_013483403.1:HCIAFFOI_03511568-732
WP_013497321.1:HCIAFFOI_0060338-202
WP_013497501.1:HCIAFFOI_00820643-801
WP_013498368.1:HCIAFFOI_01764183-348
WP_013499416.1:HCIAFFOI_02919285-465
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11471:GJLLLGJL_00458412-510
GJLLLGJL_0179367-162
408-575
GJLLLGJL_01794111-215
GJLLLGJL_02168278-428
Paenibacillus guangzhouensis, KCTC 33171 WP_152392697.1:KDFAKKPF_01224113-283
WP_152392700.1:KDFAKKPF_0122739-221
WP_152393822.1:KDFAKKPF_02526389-543
WP_152395600.1:KDFAKKPF_0463375-298
WP_152395764.1:KDFAKKPF_04842130-223
WP_152396385.1:KDFAKKPF_0556170-244
Clostridium acetobutylicum, ATCC 824 WP_010963795.1:OJAMHIDJ_00519512-669
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698447.1:PROKKA_01074393-552
WP_137696147.1:PROKKA_01888315-501
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00438412-510
FD_25_22, AnGL7 AnGL7_01822214-382
AnGL7_02242360-517
AnGL7_0280686-279
AnGL7_0280796-203
FD_25_27, AnGL8 AnGL8_004602116-2221
AnGL8_00463998-1109
AnGL8_00465893-1061
AnGL8_0198584-278
AnGL8_0198688-195
FD_MS_7_1, AnGL28 AnGL28_0097390-272
AnGL28_0097486-272
AnGL28_0353989-295
AnGL28_0354083-193
FD_SO4_25_1_F22, AnGL30 AnGL30_0203388-279
AnGL30_0203491-279
FD_SO4_37_1, AnGL2 AnGL2_0010390-272
AnGL2_0010486-272
AnGL2_0266989-295
AnGL2_0267083-193
FD_YE_25_21, AnGL21 AnGL21_0368388-281
AnGL21_0368488-194
AnGL21_0437784-241
AnGL21_015125324-5460
AnGL21_01515406-519
AnGL21_03397100-290
AnGL21_03398101-207
FD_YE_37_3, AnGL26 AnGL26_0402393-288
AnGL26_0402492-283
FD_YE_37_8_2, AnGL3 AnGL3_0342391-227
AnGL3_0342490-281
FD_YE_37_9_2, AnGL4 AnGL4_00573506-656
AnGL4_0227489-176
AnGL4_0227566-161
406-573
AnGL4_03228400-517
Syntrophus buswellii, Sbus Sbus_00020311-458
Syntrophomonas curvata, Scurva Scurva_00910412-510
Scurva_0229567-162
409-570
Scurva_0229689-193
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00565412-510
Syntrophomonas wolfei methylbutyratica, Swm Swm_0201967-162
408-575
Swm_0202089-193
Terrisporobacter hibernicus, AnGL54 AnGL54_0418395-201
AnGL54_0050817-189
FD-25-21, AnGL21 AnGL21_00362361-518
AnGL21_00709214-382
AnGL21_0341596-203
AnGL21_0341686-279
Sunxiuqinia elliptica, AnGL22 AnGL22_0401993-288
AnGL22_0402092-283
Paraclostridium benzoelyticum, AnGL27 AnGL27_03101255-374
FD-MS-7-8, AnGL9 AnGL9_0005286-271
AnGL9_0005390-272
AnGL9_00199324-483
AnGL9_0071382-192
AnGL9_0071489-295
FD-YE-37-9-3, AnGL29 AnGL29_00486400-517
AnGL29_01298506-656
AnGL29_0299989-176
AnGL29_0300066-161
406-573
Methylobacterium radiotolerans, GTSA1 PaGL#34_02071387-491
PaGL#34_0464556-171
PaGL#34_0464790-201
PaGL#34_0474996-200
PaGL#34_04750104-297
PaGL#34_05673332-483
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00061269-432
PaGL#35_0006890-229
PaGL#35_0006994-286
PaGL#35_01285176-275
Syntrophomonas erecta, GB-438 Ga0610585_00438412-510
Variovorax sp., EBFNA2 PaGL#33_00156354-515
PaGL#33_0123987-176
218-303
PaGL#33_038275-93
PaGL#33_04161463-580
Variovorax paradoxus, 2u118 PaGL#32_00021325-472
PaGL#32_00141358-520
PaGL#32_054511309-1417
PaGL#32_0120887-176
217-303
PaGL#32_0314583-202
Dietzia cinnamea, 55 PaGL#56_0159290-204
PaGL#56_03212548-655
Clostridium subterminale, CB-LS10-1 AnGL53_0006389-193
AnGL53_0006466-162
407-576
AnGL53_0050578-197
452-590
AnGL53_01732258-409
Priestia megaterium, 10L1 PaGL#57_0032586-244
PaGL#57_021761-80
Variovorax paradoxus, SPNA7 PaGL#43_055021308-1416
PaGL#43_00021325-472
PaGL#43_00142358-519
PaGL#43_0120187-176
217-303
PaGL#43_01941350-507
PaGL#43_0319883-202
Methanospirillum lacunae, Ki8-1 MLKi8_0137822-181
MLKi8_0222719-180
MLKi8_0282288-274
Geodermatophilus sp., RDM14 PaGL#36_00557500-607
PaGL#36_00850470-568
PaGL#36_0273087-201
Methylorubrum populi, CTY4 PaGL#39_0067299-295
PaGL#39_0067394-198
PaGL#39_01248336-488
PaGL#39_02718434-538
PaGL#39_0401451-166
PaGL#39_0401690-202
Methanospirillum hungatei, GP1 MhGP1_0145622-180
MhGP1_01840494-600
MhGP1_01906438-545
MhGP1_02173122-226
446-550
MhGP1_0238788-274
Methanospirillum stamsii, Pt1 MLKi8_01682439-546
MLKi8_0174522-180
MLKi8_03093108-211
429-532
MLKi8_0329388-274
Syntrophomonas wolfei, saponavida Swsap_00539413-511
Swsap_02396455-562
Bacillus subtilis, 30VD-1 PaGL#66_001173-79
PaGL#66_0062735-219
PaGL#66_0062830-212
PaGL#66_02194446-624
Peribacillus frigoritolerans, 30N-5 PaGL#67_001983-80
134-227
Micromonospora inositola, Utrum1 PaGL#61_0092350-167
PaGL#61_01280462-560
PaGL#61_0134917-130
PaGL#61_0159487-202
PaGL#61_03849150-318
PaGL#61_0390567-215
PaGL#61_04432609-716
PaGL#61_0510088-199
Sphingomonas sp., CR2A3 PaGL#62_02048278-388
PaGL#62_02261227-394
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0101295-201
Niallia taxi, AG-1 PaGL#37_000761-78
134-227
PaGL#37_0286876-200
Methanospirillum.hungatei GP1, MhGP1 8064047156:MhGP1_0051688-274
8064047373:MhGP1_00730122-226
446-550
8064047644:MhGP1_00997438-545
8064047710:MhGP1_01063494-600
8064048107:MhGP1_0144722-180
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11272:Mhun_0027222-183
Ga0065338_111126:Mhun_01126436-543
Ga0065338_111141:Mhun_01141490-597
Ga0065338_111365:Mhun_01365100-204
421-525
Ga0065338_111491:Mhun_0149189-274
MPOB, Sfum 639701254:Sfum_00514426-515
639702093:Sfum_01371334-481
639704260:Sfum_0356981-231
639704387:Sfum_0370292-265
639704463:Sfum_03779305-463
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_0204789-194
Spalm_0204867-161
Ga0128340_11450:Spalm_02049196-362
Ga0128340_11065:Spalm_01627411-509
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11471:Swol_00458412-510
Swol_0179367-162
408-575
Swol_01794111-215
Swol_02168278-428
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_109158:Szehn_00729412-510
Syntrophus aciditrophicus, SB 637858315:SYN_00016311-458
637859609:SYN_01208142-291
385-435
Syntrophus gentianae, DSM8423 Ga0074853_13516:Sgen_03001311-458
Mucilaginibacter gossypii, cycad 4 PaGL#42_04037207-306
PaGL#42_0445494-286
PaGL#42_0445591-200
Ruminococcus callidus, ATCC 27760 Rcal_0223721-199
Search by locus tag: Search
↑ Top





v4.1 @copyright 2025 UCLA