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KDFAKKPF_03924 Locus tags: • Sequence Length: 1010

Paenibacillus guangzhouensis, KCTC 33171 GCF_009363075.1

Adaptor Scaffoldin

50501001001501502002002502503003003503504004004504505005005505506006006506507007007507508008008508509009009509501000100010501050
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KDFAKKPF_03920 KDFAKKPF_03921 KDFAKKPF_03922 KDFAKKPF_03924 KDFAKKPF_03926 
    [SP]_[PF13229]_[PF00963]_[TM]

    [SP]_[207:PF13229]_[774:PF00963]_[TM]

    [SP]_[31:IPR011050]_[168:IPR006626]_[205:IPR006626]_[207:IPR039448]_[252:IPR006626]_[275:IPR006626]_[331:IPR006626]_[547:IPR008979]_[767:IPR008965]_[774:IPR002102]_[900:IPR016134]_[903:IPR036439]_[928:IPR002048]_[TM]

Looking for similar signatures in the working genomes

PF13229:Beta_helix. Right handed beta helix region

Found 161 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516854.1:LOMAGDGF_02927138-330
Clostridium acetobutylicum, DSM 1731 WP_013913627.1:FHOCHPCF_03610111-269
275-426
WP_010966822.1:FHOCHPCF_03611128-271
275-425
WP_010890741.1:FHOCHPCF_03856111-307
WP_010965268.1:FHOCHPCF_0201399-267
280-419
WP_010965269.1:FHOCHPCF_0201483-244
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942062.1:NEIHKHHH_03190506-678
WP_036936537.1:NEIHKHHH_03972137-270
WP_036936172.1:NEIHKHHH_04144224-367
WP_242857035.1:NEIHKHHH_04207548-735
Ruminococcus albus_7, DSM 20455 WP_013498303.1:HCIAFFOI_01698431-565
Paenibacillus guangzhouensis, KCTC 33171 WP_152391932.1:KDFAKKPF_00355374-532
WP_193726733.1:KDFAKKPF_00446406-527
WP_152395021.1:KDFAKKPF_03924207-392
WP_152395109.1:KDFAKKPF_04030262-425
Clostridium acetobutylicum, ATCC 824 WP_010965268.1:OJAMHIDJ_0202199-267
280-419
WP_010965269.1:OJAMHIDJ_0202283-244
WP_013913627.1:OJAMHIDJ_03622111-269
275-426
WP_010966822.1:OJAMHIDJ_03623128-271
275-425
WP_010890741.1:OJAMHIDJ_03869111-307
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696633.1:PROKKA_01343311-418
FD_25_22, AnGL7 AnGL7_00556627-794
AnGL7_00557402-555
AnGL7_03460993-1158
FD_MS_7_1, AnGL28 AnGL28_0030095-231
AnGL28_00766394-559
AnGL28_00767390-557
AnGL28_00889329-508
AnGL28_00890291-458
AnGL28_01327179-286
AnGL28_01524601-804
AnGL28_01608416-585
AnGL28_01852239-328
FD_SO4_25_1_F22, AnGL30 AnGL30_00104446-614
AnGL30_00105456-606
AnGL30_00204239-394
AnGL30_01859339-504
FD_SO4_37_1, AnGL2 AnGL2_00019329-508
AnGL2_00020291-458
AnGL2_00457179-286
AnGL2_00653601-804
AnGL2_00737416-585
AnGL2_00981239-328
AnGL2_0297995-231
AnGL2_03445394-559
AnGL2_03446390-557
FD_YE_37_3, AnGL26 AnGL26_01758253-350
360-521
AnGL26_03451312-444
454-587
AnGL26_03458327-471
491-622
AnGL26_03960327-479
FD_YE_37_8_2, AnGL3 AnGL3_01749120-230
AnGL3_0217999-273
AnGL3_02801111-249
FD-25-21, AnGL21 AnGL21_02048429-596
AnGL21_02049600-753
AnGL21_02060112-270
AnGL21_02812991-1158
Sunxiuqinia elliptica, AnGL22 AnGL22_01755253-350
360-521
AnGL22_03447312-444
454-587
AnGL22_03453327-471
491-622
AnGL22_03956327-479
FD-MS-7-8, AnGL9 AnGL9_01228109-313
AnGL9_01888308-462
AnGL9_02533351-464
AnGL9_02548304-447
AnGL9_02554329-479
AnGL9_02560375-487
AnGL9_02586172-314
AnGL9_02588155-285
AnGL9_02605348-500
AnGL9_02678341-450
491-589
Methylobacterium radiotolerans, GTSA1 PaGL#34_05921126-305
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00464169-241
PaGL#35_00873501-667
PaGL#35_00876407-559
PaGL#35_01880253-395
PaGL#35_04752238-399
Maridesulfovibrio salexigens, AnGL23 AnGL23_00827479-597
Clostridium subterminale, CB-LS10-1 AnGL53_02100420-532
Priestia megaterium, 10L1 PaGL#57_01597222-394
Methanospirillum lacunae, Ki8-1 MLKi8_0006894-240
MLKi8_00247413-566
MLKi8_00290121-251
MLKi8_01044267-401
438-574
MLKi8_01856158-293
MLKi8_02280122-288
359-473
MLKi8_02624307-444
MLKi8_03300272-435
Methylorubrum populi, CTY4 PaGL#39_0399932-131
PaGL#39_0400017-97
PaGL#39_04491477-591
Methanospirillum hungatei, GP1 MhGP1_00311167-319
MhGP1_01828435-560
MhGP1_02064109-244
MhGP1_02162144-305
MhGP1_02765487-636
MhGP1_0278492-238
242-377
Methanospirillum stamsii, Pt1 MLKi8_02935212-359
MLKi8_03202332-477
576-701
790-915
1004-1129
1219-1376
MLKi8_03415208-356
369-507
Syntrophomonas wolfei, saponavida Swsap_02843487-600
Swsap_02847965-1077
Bacillus subtilis, 30VD-1 PaGL#66_00655148-336
PaGL#66_0382589-218
281-436
Micromonospora inositola, Utrum1 PaGL#61_00407203-314
PaGL#61_03737156-377
PaGL#61_05178214-341
Sphingomonas sp., CR2A3 PaGL#62_00463193-277
PaGL#62_00466406-590
PaGL#62_00468204-280
PaGL#62_02667136-300
PaGL#62_0344897-249
Niallia taxi, AG-1 PaGL#37_05069153-343
PaGL#37_01644212-357
Methanospirillum.hungatei GP1, MhGP1 8064046744:MhGP1_0011992-238
242-377
8064046764:MhGP1_00138487-636
8064047384:MhGP1_00741144-305
8064047484:MhGP1_00839109-244
8064047722:MhGP1_01075435-560
8064049278:MhGP1_02591167-319
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111430:Mhun_01430220-362
Ga0065338_111852:Mhun_01854585-672
Ga0065338_111874:Mhun_0187565-196
201-327
MPOB, Sfum Sfum_02219781-948
Sfum_02956147-359
639704506:Sfum_03829180-309
Syntrophus aciditrophicus, SB 637860292:SYN_01857514-631
Syntrophus gentianae, DSM8423 Ga0074853_1524:Sgen_03337187-370
Mucilaginibacter gossypii, cycad 4 PaGL#42_00092291-453
PaGL#42_01099147-298
PaGL#42_0190995-245
258-415
PaGL#42_02014169-346
PaGL#42_03598274-472
PaGL#42_03659224-380
Ruminococcus callidus, ATCC 27760 Rcal_00675695-889
Rcal_01734180-346

PF00963:Cohesin. Cohesin domain

Found 234 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_014522594.1:LOMAGDGF_0065130-167
184-321
555-696
719-859
884-1024
1048-1188
WP_014522595.1:LOMAGDGF_0065233-168
204-340
408-542
610-739
WP_003519375.1:LOMAGDGF_0065335-174
206-335
WP_003519374.1:LOMAGDGF_0065433-172
WP_003516982.1:LOMAGDGF_0098533-168
WP_003516263.1:LOMAGDGF_0153441-175
217-353
418-552
611-746
804-939
974-1110
1144-1279
WP_003516262.1:LOMAGDGF_01535107-242
WP_235825069.1:LOMAGDGF_01825119-241
Clostridium acetobutylicum, DSM 1731 WP_010964228.1:FHOCHPCF_00957382-520
615-754
859-997
1102-1240
1344-1482
WP_010964232.1:FHOCHPCF_0096141-180
Acetivibrio alkalicellulosi, DSM 17461 2510060007:NJMEOJLD_0026534-141
186-241
2510060190:NJMEOJLD_0044438-173
2510060338:NJMEOJLD_0058634-83
2510060361:NJMEOJLD_0060936-170
207-341
384-519
563-695
2510060362:NJMEOJLD_00610110-249
2510060389:NJMEOJLD_00637244-354
2510061487:NJMEOJLD_01711402-457
2510061752:NJMEOJLD_0196735-140
186-299
2510062037:NJMEOJLD_0224535-147
168-302
308-423
2510062642:NJMEOJLD_02838673-780
913-1037
2510062796:NJMEOJLD_0298933-169
2510062797:NJMEOJLD_0299034-170
NJMEOJLD_029919-146
158-288
2510062799:NJMEOJLD_0299232-167
202-336
371-505
2510062800:NJMEOJLD_0299334-168
198-332
367-501
532-666
903-1040
1056-1192
1232-1369
1409-1546
1596-1733
1781-1918
2510062939:NJMEOJLD_03125133-254
2510063022:NJMEOJLD_0320839-151
188-292
2510063232:NJMEOJLD_0341836-173
196-304
347-470
2510063299:NJMEOJLD_0348540-175
198-311
2510063692:NJMEOJLD_0387047-171
2510063937:NJMEOJLD_04109111-232
Pseudobacteroides cellulosolvens, DSM 2933 WP_050752983.1:NEIHKHHH_0033837-161
WP_050753121.1:NEIHKHHH_0103443-170
WP_036940409.1:NEIHKHHH_0103540-183
WP_036940412.1:NEIHKHHH_0103633-168
WP_036943826.1:NEIHKHHH_0140373-207
245-375
412-548
584-713
764-894
944-1080
1126-1257
1303-1434
1477-1609
1639-1766
WP_036943809.1:NEIHKHHH_01413289-380
WP_036941393.1:NEIHKHHH_01685150-261
WP_036937916.1:NEIHKHHH_0182440-158
191-309
384-505
WP_050753288.1:NEIHKHHH_01831570-674
WP_036938069.1:NEIHKHHH_01898164-298
WP_050753330.1:NEIHKHHH_0206734-171
181-318
351-491
496-636
681-806
860-998
1041-1181
1318-1458
1549-1688
1744-1884
WP_050753331.1:NEIHKHHH_0206832-170
224-362
408-546
589-727
771-908
1151-1290
1321-1453
1493-1629
1678-1814
1870-2007
2070-2210
WP_036947391.1:NEIHKHHH_02300146-266
325-433
WP_050753370.1:NEIHKHHH_02301114-250
319-455
511-628
WP_050753371.1:NEIHKHHH_0230234-161
WP_036941772.1:NEIHKHHH_02347512-608
WP_036945445.1:NEIHKHHH_029531068-1166
WP_036944741.1:NEIHKHHH_0295733-160
WP_036944739.1:NEIHKHHH_0295837-152
WP_036944738.1:NEIHKHHH_0295936-149
249-358
WP_050753468.1:NEIHKHHH_0296137-157
WP_036944734.1:NEIHKHHH_0296331-165
WP_036944733.1:NEIHKHHH_0296437-153
248-350
414-553
WP_036945658.1:NEIHKHHH_032301063-1194
WP_050753563.1:NEIHKHHH_0349243-184
WP_050753599.1:NEIHKHHH_0371530-166
184-303
347-484
504-638
682-807
876-1015
1032-1160
WP_050753639.1:NEIHKHHH_04008213-344
445-576
WP_036937628.1:NEIHKHHH_04191100-231
WP_050753749.1:NEIHKHHH_04754243-375
441-574
634-767
840-973
WP_050753797.1:NEIHKHHH_050711424-1517
WP_036945212.1:NEIHKHHH_0547232-171
WP_036945220.1:NEIHKHHH_0547644-180
WP_050753883.1:NEIHKHHH_054781050-1167
Paenibacillus guangzhouensis, KCTC 33171 WP_152391660.1:KDFAKKPF_00049267-379
WP_152392021.1:KDFAKKPF_00451192-323
WP_193726735.1:KDFAKKPF_004521976-2104
WP_152392023.1:KDFAKKPF_004531322-1441
WP_152392027.1:KDFAKKPF_004571704-1833
WP_193726741.1:KDFAKKPF_005221285-1409
WP_152392087.1:KDFAKKPF_005231285-1409
WP_152392088.1:KDFAKKPF_005241680-1804
WP_152392094.1:KDFAKKPF_00531787-917
WP_227793601.1:KDFAKKPF_011661520-1640
WP_152392644.1:KDFAKKPF_01167752-877
KDFAKKPF_01505910-1041
WP_193726830.1:KDFAKKPF_0168237-156
WP_227793613.1:KDFAKKPF_017821023-1156
WP_227793500.1:KDFAKKPF_01784395-522
WP_227793624.1:KDFAKKPF_02068832-968
WP_152393458.1:KDFAKKPF_02112945-1070
WP_152393505.1:KDFAKKPF_021701106-1236
WP_152393581.1:KDFAKKPF_0225832-147
WP_152393582.1:KDFAKKPF_022591314-1443
WP_193726878.1:KDFAKKPF_022601133-1262
WP_227793639.1:KDFAKKPF_032871842-1966
WP_152394480.1:KDFAKKPF_03294978-1109
WP_227793642.1:KDFAKKPF_033341524-1632
WP_193726518.1:KDFAKKPF_0339434-140
243-378
WP_193726531.1:KDFAKKPF_03596965-1095
WP_152395021.1:KDFAKKPF_03924774-885
WP_152395201.1:KDFAKKPF_041291126-1249
WP_193726646.1:KDFAKKPF_054321087-1211
WP_152396571.1:KDFAKKPF_0577234-145
WP_152396573.1:KDFAKKPF_05774878-1001
WP_193727025.1:KDFAKKPF_063011702-1827
Clostridium acetobutylicum, ATCC 824 WP_010964228.1:OJAMHIDJ_00960382-520
615-754
859-997
1102-1240
1344-1482
WP_010964232.1:OJAMHIDJ_0096441-180
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_190530455.1:PROKKA_00348285-421
431-567
577-713
723-859
869-1005
1015-1151
1161-1297
1394-1528
1884-2019
2027-2163
2171-2307
2408-2545
2644-2781
2792-2928
WP_137699049.1:PROKKA_0035378-216
WP_171003656.1:PROKKA_00363282-419
513-651
745-883
978-1116
1211-1346
1708-1840
WP_190530457.1:PROKKA_00365281-414
514-642
738-874
882-1020
1203-1340
1346-1485
1754-1891
WP_190530459.1:PROKKA_00366281-418
513-647
744-882
888-1027
1210-1348
WP_171003596.1:PROKKA_00800217-336
WP_171003469.1:PROKKA_0218171-208
Terrisporobacter hibernicus, AnGL54 AnGL54_0228868-204
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0309168-204
Niallia taxi, AG-1 PaGL#37_0335031-168
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11359:Spalm_01947576-697
713-835
Ruminococcus callidus, ATCC 27760 Rcal_0015233-153
Rcal_01096247-299
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