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PaGL#39_03999 Locus tags: • Sequence Length: 510

Methylorubrum populi, CTY4 Batch4_genome_fasta/bc2015

5050100100150150200200250250300300350350400400450450500500550550
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PaGL#39_03997 PaGL#39_03998 PaGL#39_03999 PaGL#39_04000 PaGL#39_04002 PaGL#39_04003 
    [PF13229]_[PF00353]_[PF00353]

    [32:PF13229]_[348:PF00353]_[384:PF00353]

    [1:IPR011050]_[32:IPR039448]_[37:IPR006626]_[60:IPR006626]_[95:IPR006626]_[173:IPR006626]_[200:IPR006626]_[256:IPR006626]_[343:IPR011049]_[348:IPR001343]_[384:IPR001343]

Looking for similar signatures in the working genomes

PF13229:Beta_helix. Right handed beta helix region

Found 161 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516854.1:LOMAGDGF_02927138-330
Clostridium acetobutylicum, DSM 1731 WP_013913627.1:FHOCHPCF_03610111-269
275-426
WP_010966822.1:FHOCHPCF_03611128-271
275-425
WP_010890741.1:FHOCHPCF_03856111-307
WP_010965268.1:FHOCHPCF_0201399-267
280-419
WP_010965269.1:FHOCHPCF_0201483-244
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942062.1:NEIHKHHH_03190506-678
WP_036936537.1:NEIHKHHH_03972137-270
WP_036936172.1:NEIHKHHH_04144224-367
WP_242857035.1:NEIHKHHH_04207548-735
Ruminococcus albus_7, DSM 20455 WP_013498303.1:HCIAFFOI_01698431-565
Paenibacillus guangzhouensis, KCTC 33171 WP_152391932.1:KDFAKKPF_00355374-532
WP_193726733.1:KDFAKKPF_00446406-527
WP_152395021.1:KDFAKKPF_03924207-392
WP_152395109.1:KDFAKKPF_04030262-425
Clostridium acetobutylicum, ATCC 824 WP_010965268.1:OJAMHIDJ_0202199-267
280-419
WP_010965269.1:OJAMHIDJ_0202283-244
WP_013913627.1:OJAMHIDJ_03622111-269
275-426
WP_010966822.1:OJAMHIDJ_03623128-271
275-425
WP_010890741.1:OJAMHIDJ_03869111-307
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696633.1:PROKKA_01343311-418
FD_25_22, AnGL7 AnGL7_00556627-794
AnGL7_00557402-555
AnGL7_03460993-1158
FD_MS_7_1, AnGL28 AnGL28_0030095-231
AnGL28_00766394-559
AnGL28_00767390-557
AnGL28_00889329-508
AnGL28_00890291-458
AnGL28_01327179-286
AnGL28_01524601-804
AnGL28_01608416-585
AnGL28_01852239-328
FD_SO4_25_1_F22, AnGL30 AnGL30_00104446-614
AnGL30_00105456-606
AnGL30_00204239-394
AnGL30_01859339-504
FD_SO4_37_1, AnGL2 AnGL2_00019329-508
AnGL2_00020291-458
AnGL2_00457179-286
AnGL2_00653601-804
AnGL2_00737416-585
AnGL2_00981239-328
AnGL2_0297995-231
AnGL2_03445394-559
AnGL2_03446390-557
FD_YE_37_3, AnGL26 AnGL26_01758253-350
360-521
AnGL26_03451312-444
454-587
AnGL26_03458327-471
491-622
AnGL26_03960327-479
FD_YE_37_8_2, AnGL3 AnGL3_01749120-230
AnGL3_0217999-273
AnGL3_02801111-249
FD-25-21, AnGL21 AnGL21_02048429-596
AnGL21_02049600-753
AnGL21_02060112-270
AnGL21_02812991-1158
Sunxiuqinia elliptica, AnGL22 AnGL22_01755253-350
360-521
AnGL22_03447312-444
454-587
AnGL22_03453327-471
491-622
AnGL22_03956327-479
FD-MS-7-8, AnGL9 AnGL9_01228109-313
AnGL9_01888308-462
AnGL9_02533351-464
AnGL9_02548304-447
AnGL9_02554329-479
AnGL9_02560375-487
AnGL9_02586172-314
AnGL9_02588155-285
AnGL9_02605348-500
AnGL9_02678341-450
491-589
Methylobacterium radiotolerans, GTSA1 PaGL#34_05921126-305
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00464169-241
PaGL#35_00873501-667
PaGL#35_00876407-559
PaGL#35_01880253-395
PaGL#35_04752238-399
Maridesulfovibrio salexigens, AnGL23 AnGL23_00827479-597
Clostridium subterminale, CB-LS10-1 AnGL53_02100420-532
Priestia megaterium, 10L1 PaGL#57_01597222-394
Methanospirillum lacunae, Ki8-1 MLKi8_0006894-240
MLKi8_00247413-566
MLKi8_00290121-251
MLKi8_01044267-401
438-574
MLKi8_01856158-293
MLKi8_02280122-288
359-473
MLKi8_02624307-444
MLKi8_03300272-435
Methylorubrum populi, CTY4 PaGL#39_0399932-131
PaGL#39_0400017-97
PaGL#39_04491477-591
Methanospirillum hungatei, GP1 MhGP1_00311167-319
MhGP1_01828435-560
MhGP1_02064109-244
MhGP1_02162144-305
MhGP1_02765487-636
MhGP1_0278492-238
242-377
Methanospirillum stamsii, Pt1 MLKi8_02935212-359
MLKi8_03202332-477
576-701
790-915
1004-1129
1219-1376
MLKi8_03415208-356
369-507
Syntrophomonas wolfei, saponavida Swsap_02843487-600
Swsap_02847965-1077
Bacillus subtilis, 30VD-1 PaGL#66_00655148-336
PaGL#66_0382589-218
281-436
Micromonospora inositola, Utrum1 PaGL#61_00407203-314
PaGL#61_03737156-377
PaGL#61_05178214-341
Sphingomonas sp., CR2A3 PaGL#62_00463193-277
PaGL#62_00466406-590
PaGL#62_00468204-280
PaGL#62_02667136-300
PaGL#62_0344897-249
Niallia taxi, AG-1 PaGL#37_05069153-343
PaGL#37_01644212-357
Methanospirillum.hungatei GP1, MhGP1 8064046744:MhGP1_0011992-238
242-377
8064046764:MhGP1_00138487-636
8064047384:MhGP1_00741144-305
8064047484:MhGP1_00839109-244
8064047722:MhGP1_01075435-560
8064049278:MhGP1_02591167-319
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111430:Mhun_01430220-362
Ga0065338_111852:Mhun_01854585-672
Ga0065338_111874:Mhun_0187565-196
201-327
MPOB, Sfum Sfum_02219781-948
Sfum_02956147-359
639704506:Sfum_03829180-309
Syntrophus aciditrophicus, SB 637860292:SYN_01857514-631
Syntrophus gentianae, DSM8423 Ga0074853_1524:Sgen_03337187-370
Mucilaginibacter gossypii, cycad 4 PaGL#42_00092291-453
PaGL#42_01099147-298
PaGL#42_0190995-245
258-415
PaGL#42_02014169-346
PaGL#42_03598274-472
PaGL#42_03659224-380
Ruminococcus callidus, ATCC 27760 Rcal_00675695-889
Rcal_01734180-346

PF00353:HemolysinCabind. RTX calcium-binding nonapeptide repeat (4 copies)

Found 309 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510061544:NJMEOJLD_0176463-83
104-127
281-305
Ruminococcus albus_7, DSM 20455 WP_013497597.1:HCIAFFOI_00929343-375
378-406
437-460
573-608
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_280513962.1:PROKKA_006795-39
138-173
290-324
431-466
558-585
585-618
713-747
844-879
977-1011
1108-1143
1241-1275
1373-1407
1504-1539
1637-1671
1768-1803
1900-1933
1935-1968
2073-2108
2239-2259
2774-2809
2809-2845
2846-2877
2962-2996
2997-3033
3176-3211
3211-3246
3372-3407
3425-3460
3579-3614
3614-3646
3751-3784
3784-3819
3929-3962
4073-4102
4102-4137
4248-4280
4380-4415
4415-4450
4546-4581
4581-4616
4706-4742
4742-4778
4808-4837
4922-4958
4958-4993
FD_25_22, AnGL7 AnGL7_025107072-7107
FD_25_27, AnGL8 AnGL8_004602691-2725
2727-2762
AnGL8_004631310-1343
1343-1378
AnGL8_004651204-1218
1249-1284
AnGL8_00941377-413
414-449
486-521
FD_YE_25_21, AnGL21 AnGL21_015125288-5310
5674-5699
5764-5797
AnGL21_01515359-377
729-747
809-843
AnGL21_034813640-3671
Syntrophus buswellii, Sbus Sbus_0020628-61
101-120
146-182
185-218
220-237
268-287
295-331
358-388
434-454
460-489
489-524
588-622
Sbus_01015865-901
902-936
1030-1066
1067-1101
1195-1231
1232-1266
1378-1413
1469-1503
Sbus_0222895-127
127-162
226-261
261-296
Sbus_022964-40
Sbus_0229782-116
162-197
215-246
Sbus_022994-40
41-76
138-174
183-218
FD-25-21, AnGL21 AnGL21_001524636-4671
Variovorax sp., EBFNA2 PaGL#33_020131731-1766
PaGL#33_041621607-1639
Maridesulfovibrio salexigens, AnGL23 AnGL23_02450360-395
395-431
481-495
539-575
AnGL23_02451418-450
521-555
673-708
708-744
809-838
AnGL23_0354649-77
78-113
132-166
280-314
317-351
379-414
415-448
563-598
599-633
635-664
1104-1139
1140-1174
1333-1369
1378-1413
1565-1599
1715-1750
1750-1786
1805-1839
1962-1996
1997-2032
2063-2091
2214-2248
AnGL23_03715381-415
416-448
601-632
632-668
734-768
831-862
907-942
1001-1021
1074-1093
Geodermatophilus sp., RDM14 PaGL#36_02154798-834
PaGL#36_03444980-1014
1016-1050
1052-1085
1087-1110
1122-1144
1281-1305
Methylorubrum populi, CTY4 PaGL#39_0215210507-10543
10618-10650
10748-10777
10805-10835
10860-10891
10974-11005
11033-11063
11090-11120
11213-11245
11402-11432
11451-11484
11508-11541
11563-11592
11626-11659
11681-11710
11741-11776
11799-11834
11857-11891
11913-11944
11973-12008
12031-12065
12087-12116
12147-12182
12205-12239
12261-12292
12331-12361
12382-12413
12444-12475
12495-12527
12555-12585
12608-12639
12790-12821
12847-12877
12895-12930
12962-12993
13010-13041
13192-13223
13248-13279
13299-13332
13354-13389
13413-13446
13471-13502
13527-13560
13588-13621
13647-13681
13751-13783
13899-13932
14036-14054
14107-14125
14204-14221
14294-14314
PaGL#39_022745-31
59-93
95-130
157-192
PaGL#39_03059321-356
356-391
PaGL#39_035741326-1359
1362-1395
1406-1440
1602-1626
1865-1899
1900-1936
2018-2052
2057-2072
2265-2286
2292-2306
3290-3325
3326-3360
3361-3396
3460-3491
PaGL#39_03576354-388
390-424
426-461
461-497
498-533
540-554
PaGL#39_03752299-333
406-440
PaGL#39_03999348-384
384-419
PaGL#39_04000342-378
378-413
PaGL#39_04456218-252
253-287
Micromonospora inositola, Utrum1 PaGL#61_03255868-903
921-957
PaGL#61_042341925-1952
1962-1986
2056-2081
2105-2123
2135-2162
2246-2267
2270-2304
2322-2353
2359-2379
2402-2433
2520-2554
2655-2687
2856-2887
2957-2986
Syntrophus gentianae, DSM8423 Ga0074853_1172:Sgen_0217114-48
50-84
Ga0074853_1127:Sgen_017717-30
396-431
432-467
467-502
522-557
593-629
718-753
799-835
907-941
Ga0074853_1128:Sgen_017729-40
40-75
121-156
239-273
326-361
Sgen_01319331-367
451-486
Sgen_0265122-57
112-147
156-192
Ga0074853_13716:Sgen_0305775-107
Ga0074853_11440:Sgen_0196321-56
104-116
119-152
152-187
217-230
239-275
276-302
331-344
346-380
380-415
Sgen_019765-41
43-67
113-148
Ga0074853_10767:Sgen_01228130-164
236-271
317-352
353-387
Ga0074853_11485:Sgen_020084-40
59-93
157-191
256-284
356-390
462-498
553-588
633-669
669-704
Ga0074853_10492:Sgen_00728115-149
203-237
240-271
Ga0074853_103206:Sgen_0063099-112
115-139
202-236
291-317
352-388
388-416

PF00353:HemolysinCabind. RTX calcium-binding nonapeptide repeat (4 copies)

Found 309 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510061544:NJMEOJLD_0176463-83
104-127
281-305
Ruminococcus albus_7, DSM 20455 WP_013497597.1:HCIAFFOI_00929343-375
378-406
437-460
573-608
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_280513962.1:PROKKA_006795-39
138-173
290-324
431-466
558-585
585-618
713-747
844-879
977-1011
1108-1143
1241-1275
1373-1407
1504-1539
1637-1671
1768-1803
1900-1933
1935-1968
2073-2108
2239-2259
2774-2809
2809-2845
2846-2877
2962-2996
2997-3033
3176-3211
3211-3246
3372-3407
3425-3460
3579-3614
3614-3646
3751-3784
3784-3819
3929-3962
4073-4102
4102-4137
4248-4280
4380-4415
4415-4450
4546-4581
4581-4616
4706-4742
4742-4778
4808-4837
4922-4958
4958-4993
FD_25_22, AnGL7 AnGL7_025107072-7107
FD_25_27, AnGL8 AnGL8_004602691-2725
2727-2762
AnGL8_004631310-1343
1343-1378
AnGL8_004651204-1218
1249-1284
AnGL8_00941377-413
414-449
486-521
FD_YE_25_21, AnGL21 AnGL21_015125288-5310
5674-5699
5764-5797
AnGL21_01515359-377
729-747
809-843
AnGL21_034813640-3671
Syntrophus buswellii, Sbus Sbus_0020628-61
101-120
146-182
185-218
220-237
268-287
295-331
358-388
434-454
460-489
489-524
588-622
Sbus_01015865-901
902-936
1030-1066
1067-1101
1195-1231
1232-1266
1378-1413
1469-1503
Sbus_0222895-127
127-162
226-261
261-296
Sbus_022964-40
Sbus_0229782-116
162-197
215-246
Sbus_022994-40
41-76
138-174
183-218
FD-25-21, AnGL21 AnGL21_001524636-4671
Variovorax sp., EBFNA2 PaGL#33_020131731-1766
PaGL#33_041621607-1639
Maridesulfovibrio salexigens, AnGL23 AnGL23_02450360-395
395-431
481-495
539-575
AnGL23_02451418-450
521-555
673-708
708-744
809-838
AnGL23_0354649-77
78-113
132-166
280-314
317-351
379-414
415-448
563-598
599-633
635-664
1104-1139
1140-1174
1333-1369
1378-1413
1565-1599
1715-1750
1750-1786
1805-1839
1962-1996
1997-2032
2063-2091
2214-2248
AnGL23_03715381-415
416-448
601-632
632-668
734-768
831-862
907-942
1001-1021
1074-1093
Geodermatophilus sp., RDM14 PaGL#36_02154798-834
PaGL#36_03444980-1014
1016-1050
1052-1085
1087-1110
1122-1144
1281-1305
Methylorubrum populi, CTY4 PaGL#39_0215210507-10543
10618-10650
10748-10777
10805-10835
10860-10891
10974-11005
11033-11063
11090-11120
11213-11245
11402-11432
11451-11484
11508-11541
11563-11592
11626-11659
11681-11710
11741-11776
11799-11834
11857-11891
11913-11944
11973-12008
12031-12065
12087-12116
12147-12182
12205-12239
12261-12292
12331-12361
12382-12413
12444-12475
12495-12527
12555-12585
12608-12639
12790-12821
12847-12877
12895-12930
12962-12993
13010-13041
13192-13223
13248-13279
13299-13332
13354-13389
13413-13446
13471-13502
13527-13560
13588-13621
13647-13681
13751-13783
13899-13932
14036-14054
14107-14125
14204-14221
14294-14314
PaGL#39_022745-31
59-93
95-130
157-192
PaGL#39_03059321-356
356-391
PaGL#39_035741326-1359
1362-1395
1406-1440
1602-1626
1865-1899
1900-1936
2018-2052
2057-2072
2265-2286
2292-2306
3290-3325
3326-3360
3361-3396
3460-3491
PaGL#39_03576354-388
390-424
426-461
461-497
498-533
540-554
PaGL#39_03752299-333
406-440
PaGL#39_03999348-384
384-419
PaGL#39_04000342-378
378-413
PaGL#39_04456218-252
253-287
Micromonospora inositola, Utrum1 PaGL#61_03255868-903
921-957
PaGL#61_042341925-1952
1962-1986
2056-2081
2105-2123
2135-2162
2246-2267
2270-2304
2322-2353
2359-2379
2402-2433
2520-2554
2655-2687
2856-2887
2957-2986
Syntrophus gentianae, DSM8423 Ga0074853_1172:Sgen_0217114-48
50-84
Ga0074853_1127:Sgen_017717-30
396-431
432-467
467-502
522-557
593-629
718-753
799-835
907-941
Ga0074853_1128:Sgen_017729-40
40-75
121-156
239-273
326-361
Sgen_01319331-367
451-486
Sgen_0265122-57
112-147
156-192
Ga0074853_13716:Sgen_0305775-107
Ga0074853_11440:Sgen_0196321-56
104-116
119-152
152-187
217-230
239-275
276-302
331-344
346-380
380-415
Sgen_019765-41
43-67
113-148
Ga0074853_10767:Sgen_01228130-164
236-271
317-352
353-387
Ga0074853_11485:Sgen_020084-40
59-93
157-191
256-284
356-390
462-498
553-588
633-669
669-704
Ga0074853_10492:Sgen_00728115-149
203-237
240-271
Ga0074853_103206:Sgen_0063099-112
115-139
202-236
291-317
352-388
388-416
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