SMPP Home

MLKi8_00068 Locus tags: • Sequence Length: 501

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200250250300300350350400400450450500500550550
Show complete sequence
Click domain (colored bar) to show sequence
MLKi8_00065 MLKi8_00066 MLKi8_00067 MLKi8_00068 MLKi8_00069 MLKi8_00071 MLKi8_00073 
    [PF01978]_[PF13229]_[PF11495]_[PF05048]_[TM]

    [8:PF01978]_[94:PF13229]_[109:PF11495]_[254:PF05048]_[TM]

    [1:IPR036390]_[8:IPR002831]_[22:IPR011991]_[66:IPR011050]_[94:IPR039448]_[109:IPR021586]_[148:IPR006626]_[170:IPR006626]_[216:IPR006626]_[252:IPR006626]_[254:IPR007742]_[274:IPR006626]_[277:IPR011050]_[297:IPR006626]_[321:IPR006626]_[348:IPR006626]_[TM]

Looking for similar signatures in the working genomes

PF01978:TrmB. Sugar-specific transcriptional regulator TrmB

Found 36 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510060482:NJMEOJLD_007308-74
Pseudobacteroides cellulosolvens, DSM 2933 WP_036944084.1:NEIHKHHH_027597-72
Paenibacillus guangzhouensis, KCTC 33171 WP_152392822.1:KDFAKKPF_013727-74
WP_152394170.1:KDFAKKPF_029231-68
WP_152397463.1:KDFAKKPF_055768-74
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698510.1:PROKKA_012338-72
FD_25_27, AnGL8 AnGL8_0280121-89
FD_YE_25_21, AnGL21 AnGL21_0026747-99
FD_YE_37_9_2, AnGL4 AnGL4_030276-73
Terrisporobacter hibernicus, AnGL54 AnGL54_015127-75
FD-YE-37-9-3, AnGL29 AnGL29_002856-73
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0219220-84
Priestia megaterium, 10L1 PaGL#57_048691-69
PaGL#57_052867-75
Methanospirillum lacunae, Ki8-1 MLKi8_0037519-86
MLKi8_006489-75
MLKi8_0102312-80
MLKi8_011264-57
MLKi8_0304211-79
Fictibacillus phosphorivorans, TY7 PaGL#38_043611-70
Methanospirillum hungatei, GP1 MhGP1_007979-76
MhGP1_0261222-76
Methanospirillum stamsii, Pt1 MLKi8_000688-76
MLKi8_0110218-85
Bacillus subtilis, 30VD-1 PaGL#66_016338-75
Peribacillus frigoritolerans, 30N-5 PaGL#67_008077-75
PaGL#67_031268-75
Micromonospora inositola, Utrum1 PaGL#61_025023-59
PaGL#61_025551-53
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_023197-75
Niallia taxi, AG-1 PaGL#37_044797-76
PaGL#37_045289-74
PaGL#37_053288-75
Methanospirillum.hungatei GP1, MhGP1 8064046918:MhGP1_0029122-76
8064048779:MhGP1_021059-76
Mucilaginibacter gossypii, cycad 4 PaGL#42_0066220-80

PF13229:Beta_helix. Right handed beta helix region

Found 161 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516854.1:LOMAGDGF_02927138-330
Clostridium acetobutylicum, DSM 1731 WP_013913627.1:FHOCHPCF_03610111-269
275-426
WP_010966822.1:FHOCHPCF_03611128-271
275-425
WP_010890741.1:FHOCHPCF_03856111-307
WP_010965268.1:FHOCHPCF_0201399-267
280-419
WP_010965269.1:FHOCHPCF_0201483-244
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942062.1:NEIHKHHH_03190506-678
WP_036936537.1:NEIHKHHH_03972137-270
WP_036936172.1:NEIHKHHH_04144224-367
WP_242857035.1:NEIHKHHH_04207548-735
Ruminococcus albus_7, DSM 20455 WP_013498303.1:HCIAFFOI_01698431-565
Paenibacillus guangzhouensis, KCTC 33171 WP_152391932.1:KDFAKKPF_00355374-532
WP_193726733.1:KDFAKKPF_00446406-527
WP_152395021.1:KDFAKKPF_03924207-392
WP_152395109.1:KDFAKKPF_04030262-425
Clostridium acetobutylicum, ATCC 824 WP_010965268.1:OJAMHIDJ_0202199-267
280-419
WP_010965269.1:OJAMHIDJ_0202283-244
WP_013913627.1:OJAMHIDJ_03622111-269
275-426
WP_010966822.1:OJAMHIDJ_03623128-271
275-425
WP_010890741.1:OJAMHIDJ_03869111-307
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696633.1:PROKKA_01343311-418
FD_25_22, AnGL7 AnGL7_00556627-794
AnGL7_00557402-555
AnGL7_03460993-1158
FD_MS_7_1, AnGL28 AnGL28_0030095-231
AnGL28_00766394-559
AnGL28_00767390-557
AnGL28_00889329-508
AnGL28_00890291-458
AnGL28_01327179-286
AnGL28_01524601-804
AnGL28_01608416-585
AnGL28_01852239-328
FD_SO4_25_1_F22, AnGL30 AnGL30_00104446-614
AnGL30_00105456-606
AnGL30_00204239-394
AnGL30_01859339-504
FD_SO4_37_1, AnGL2 AnGL2_00019329-508
AnGL2_00020291-458
AnGL2_00457179-286
AnGL2_00653601-804
AnGL2_00737416-585
AnGL2_00981239-328
AnGL2_0297995-231
AnGL2_03445394-559
AnGL2_03446390-557
FD_YE_37_3, AnGL26 AnGL26_01758253-350
360-521
AnGL26_03451312-444
454-587
AnGL26_03458327-471
491-622
AnGL26_03960327-479
FD_YE_37_8_2, AnGL3 AnGL3_01749120-230
AnGL3_0217999-273
AnGL3_02801111-249
FD-25-21, AnGL21 AnGL21_02048429-596
AnGL21_02049600-753
AnGL21_02060112-270
AnGL21_02812991-1158
Sunxiuqinia elliptica, AnGL22 AnGL22_01755253-350
360-521
AnGL22_03447312-444
454-587
AnGL22_03453327-471
491-622
AnGL22_03956327-479
FD-MS-7-8, AnGL9 AnGL9_01228109-313
AnGL9_01888308-462
AnGL9_02533351-464
AnGL9_02548304-447
AnGL9_02554329-479
AnGL9_02560375-487
AnGL9_02586172-314
AnGL9_02588155-285
AnGL9_02605348-500
AnGL9_02678341-450
491-589
Methylobacterium radiotolerans, GTSA1 PaGL#34_05921126-305
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00464169-241
PaGL#35_00873501-667
PaGL#35_00876407-559
PaGL#35_01880253-395
PaGL#35_04752238-399
Maridesulfovibrio salexigens, AnGL23 AnGL23_00827479-597
Clostridium subterminale, CB-LS10-1 AnGL53_02100420-532
Priestia megaterium, 10L1 PaGL#57_01597222-394
Methanospirillum lacunae, Ki8-1 MLKi8_0006894-240
MLKi8_00247413-566
MLKi8_00290121-251
MLKi8_01044267-401
438-574
MLKi8_01856158-293
MLKi8_02280122-288
359-473
MLKi8_02624307-444
MLKi8_03300272-435
Methylorubrum populi, CTY4 PaGL#39_0399932-131
PaGL#39_0400017-97
PaGL#39_04491477-591
Methanospirillum hungatei, GP1 MhGP1_00311167-319
MhGP1_01828435-560
MhGP1_02064109-244
MhGP1_02162144-305
MhGP1_02765487-636
MhGP1_0278492-238
242-377
Methanospirillum stamsii, Pt1 MLKi8_02935212-359
MLKi8_03202332-477
576-701
790-915
1004-1129
1219-1376
MLKi8_03415208-356
369-507
Syntrophomonas wolfei, saponavida Swsap_02843487-600
Swsap_02847965-1077
Bacillus subtilis, 30VD-1 PaGL#66_00655148-336
PaGL#66_0382589-218
281-436
Micromonospora inositola, Utrum1 PaGL#61_00407203-314
PaGL#61_03737156-377
PaGL#61_05178214-341
Sphingomonas sp., CR2A3 PaGL#62_00463193-277
PaGL#62_00466406-590
PaGL#62_00468204-280
PaGL#62_02667136-300
PaGL#62_0344897-249
Niallia taxi, AG-1 PaGL#37_05069153-343
PaGL#37_01644212-357
Methanospirillum.hungatei GP1, MhGP1 8064046744:MhGP1_0011992-238
242-377
8064046764:MhGP1_00138487-636
8064047384:MhGP1_00741144-305
8064047484:MhGP1_00839109-244
8064047722:MhGP1_01075435-560
8064049278:MhGP1_02591167-319
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111430:Mhun_01430220-362
Ga0065338_111852:Mhun_01854585-672
Ga0065338_111874:Mhun_0187565-196
201-327
MPOB, Sfum Sfum_02219781-948
Sfum_02956147-359
639704506:Sfum_03829180-309
Syntrophus aciditrophicus, SB 637860292:SYN_01857514-631
Syntrophus gentianae, DSM8423 Ga0074853_1524:Sgen_03337187-370
Mucilaginibacter gossypii, cycad 4 PaGL#42_00092291-453
PaGL#42_01099147-298
PaGL#42_0190995-245
258-415
PaGL#42_02014169-346
PaGL#42_03598274-472
PaGL#42_03659224-380
Ruminococcus callidus, ATCC 27760 Rcal_00675695-889
Rcal_01734180-346

PF11495:Regulator_TrmB. Archaeal transcriptional regulator TrmB

Found 18 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510060482:NJMEOJLD_00730106-193
Pseudobacteroides cellulosolvens, DSM 2933 WP_036944084.1:NEIHKHHH_02759107-193
Paenibacillus guangzhouensis, KCTC 33171 WP_152392822.1:KDFAKKPF_01372107-226
WP_152394170.1:KDFAKKPF_02923100-222
WP_152397463.1:KDFAKKPF_05576110-236
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698510.1:PROKKA_01233104-161
FD_25_27, AnGL8 AnGL8_02801121-219
FD_YE_37_9_2, AnGL4 AnGL4_03027106-203
Terrisporobacter hibernicus, AnGL54 AnGL54_01512108-210
FD-YE-37-9-3, AnGL29 AnGL29_00285106-203
Priestia megaterium, 10L1 PaGL#57_04869101-222
Fictibacillus phosphorivorans, TY7 PaGL#38_04361101-222
Methanospirillum stamsii, Pt1 MLKi8_00068109-176
Bacillus subtilis, 30VD-1 PaGL#66_01633109-175
Peribacillus frigoritolerans, 30N-5 PaGL#67_03126109-167
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_02319108-210
Niallia taxi, AG-1 PaGL#37_04479110-227
PaGL#37_05328109-173

PF05048:NosD. Periplasmic copper-binding protein (NosD)

Found 70 similar signatures
Paenibacillus guangzhouensis, KCTC 33171 KDFAKKPF_01214157-339
FD_YE_25_21, AnGL21 AnGL21_02336147-354
FD_YE_37_9_2, AnGL4 AnGL4_02132392-542
Terrisporobacter hibernicus, AnGL54 AnGL54_005760-141
FD-25-21, AnGL21 AnGL21_01389219-430
FD-YE-37-9-3, AnGL29 AnGL29_02857392-542
Exiguobacterium mexicanum, AnGL24 AnGL24_00667122-297
Methanospirillum lacunae, Ki8-1 MLKi8_00068254-404
MLKi8_00247997-1150
MLKi8_00290359-507
MLKi8_00521205-369
MLKi8_0071261-248
MLKi8_01781389-550
MLKi8_01855160-328
328-525
MLKi8_01856327-524
MLKi8_02014403-592
MLKi8_02280479-630
MLKi8_02624475-655
MLKi8_02636117-285
349-528
MLKi8_02813663-837
MLKi8_03300470-595
611-729
MLKi8_03453111-309
Methanospirillum hungatei, GP1 MhGP1_00192120-319
MhGP1_00311350-524
MhGP1_00759223-371
MhGP1_0090062-284
MhGP1_01828579-722
MhGP1_02064308-492
MhGP1_02162520-679
MhGP1_02435623-804
MhGP1_02764531-679
MhGP1_02765665-833
MhGP1_02784468-666
MhGP1_02937392-558
Methanospirillum stamsii, Pt1 MLKi8_00433286-500
MLKi8_00496109-307
MLKi8_01032225-371
MLKi8_0115365-285
MLKi8_02935437-632
MLKi8_02954664-836
MLKi8_03227618-807
MLKi8_03415530-698
MLKi8_03713234-377
395-520
527-685
Syntrophomonas wolfei, saponavida Swsap_0144333-206
Swsap_03332532-708
Sphingomonas sp., CR2A3 PaGL#62_02792131-282
Methanospirillum.hungatei GP1, MhGP1 8064046744:MhGP1_00119468-666
8064046764:MhGP1_00138665-833
8064046765:MhGP1_00139531-679
8064047102:MhGP1_00468623-804
8064047384:MhGP1_00741520-679
8064047484:MhGP1_00839308-492
8064047722:MhGP1_01075579-722
8064048675:MhGP1_0200262-284
8064048817:MhGP1_02143223-371
8064049278:MhGP1_02591350-524
8064049396:MhGP1_02710120-319
8064049905:MhGP1_03209392-558
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111282:Mhun_01283174-389
Ga0065338_111536:Mhun_01537616-803
Ga0065338_111854:Mhun_01856664-833
Ga0065338_111874:Mhun_01875427-625
Ga0065338_112753:Mhun_02749116-313
Ga0065338_113282:Mhun_03279247-402
Ga0065338_113455:Mhun_0345162-285
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA