SMPP Home

MLKi8_00521 Locus tags: • Sequence Length: 736

Methanospirillum stamsii, Pt1 Batch4_genome_fasta/bc2029

5050100100150150200200250250300300350350400400450450500500550550600600650650700700750750
Show complete sequence
Click domain (colored bar) to show sequence
MLKi8_00516 MLKi8_00517 MLKi8_00518 MLKi8_00519 MLKi8_00520 MLKi8_00521 MLKi8_00522 MLKi8_00526 
    [SP]_[PF03235]_[PF05048]_[PF07510]_[PF07705]_[TM]

    [SP]_[8:PF03235]_[205:PF05048]_[421:PF07510]_[476:PF07705]_[TM]

    [SP]_[8:IPR004919]_[190:IPR011050]_[205:IPR007742]_[421:IPR011089]_[476:IPR011635]_[TM]

Looking for similar signatures in the working genomes

PF03235:GmrSD_N. GmrSD restriction endonuclease, N-terminal domain

Found 56 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_010964481.1:FHOCHPCF_0122327-158
Acetivibrio alkalicellulosi, DSM 17461 2510061679:NJMEOJLD_0189513-237
Ruminococcus albus_7, DSM 20455 WP_013499115.1:HCIAFFOI_0257417-237
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112358:GJLLLGJL_0231110-194
GJLLLGJL_0231220-175
GJLLLGJL_0231720-80
Paenibacillus guangzhouensis, KCTC 33171 WP_152395576.1:KDFAKKPF_04605111-207
Clostridium acetobutylicum, ATCC 824 WP_010964481.1:OJAMHIDJ_0122627-158
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698242.1:PROKKA_0115712-233
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0084620-175
OINOEOOJ_0084710-194
OINOEOOJ_016649-227
FD_25_27, AnGL8 AnGL8_0245328-330
FD_SO4_25_1_F22, AnGL30 AnGL30_0071414-169
FD_YE_37_8_2, AnGL3 AnGL3_0058215-179
AnGL3_005837-206
AnGL3_0204024-157
Syntrophus buswellii, Sbus Sbus_0017310-238
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0016310-194
Sespor_0016420-175
Sespor_019749-227
Terrisporobacter hibernicus, AnGL54 AnGL54_0025411-228
FD-MS-7-8, AnGL9 AnGL9_0222434-242
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_026328-217
Syntrophomonas erecta, GB-438 Ga0610585_0084620-175
Ga0610585_0084710-194
Ga0610585_016649-227
Variovorax paradoxus, 2u118 PaGL#32_0026811-218
PaGL#32_045381-242
Dietzia cinnamea, 55 PaGL#56_0004611-228
Maridesulfovibrio salexigens, AnGL23 AnGL23_0220269-212
AnGL23_0293320-268
Clostridium subterminale, CB-LS10-1 AnGL53_0053239-185
Methanospirillum lacunae, Ki8-1 MLKi8_000139-216
MLKi8_034798-223
Methylorubrum populi, CTY4 PaGL#39_0367429-185
Fictibacillus phosphorivorans, TY7 PaGL#38_0244254-195
Methanospirillum hungatei, GP1 MhGP1_002178-222
MhGP1_025697-220
Methanospirillum stamsii, Pt1 MLKi8_005218-222
MLKi8_018107-217
Peribacillus frigoritolerans, 30N-5 PaGL#67_0130127-186
PaGL#67_014959-224
PaGL#67_014967-216
PaGL#67_032349-234
Micromonospora inositola, Utrum1 PaGL#61_0314434-94
Methanospirillum.hungatei GP1, MhGP1 8064046964:MhGP1_003347-220
8064049371:MhGP1_026858-222
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11529:Mhun_0052715-261
Ga0065338_112777:Mhun_027738-221
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112358:Swol_0231110-194
Swol_0231220-175
Swol_0231720-80
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1282:Szehn_0166110-237
Mucilaginibacter gossypii, cycad 4 PaGL#42_0045910-224
Ruminococcus callidus, ATCC 27760 Rcal_0221521-260

PF05048:NosD. Periplasmic copper-binding protein (NosD)

Found 70 similar signatures
Paenibacillus guangzhouensis, KCTC 33171 KDFAKKPF_01214157-339
FD_YE_25_21, AnGL21 AnGL21_02336147-354
FD_YE_37_9_2, AnGL4 AnGL4_02132392-542
Terrisporobacter hibernicus, AnGL54 AnGL54_005760-141
FD-25-21, AnGL21 AnGL21_01389219-430
FD-YE-37-9-3, AnGL29 AnGL29_02857392-542
Exiguobacterium mexicanum, AnGL24 AnGL24_00667122-297
Methanospirillum lacunae, Ki8-1 MLKi8_00068254-404
MLKi8_00247997-1150
MLKi8_00290359-507
MLKi8_00521205-369
MLKi8_0071261-248
MLKi8_01781389-550
MLKi8_01855160-328
328-525
MLKi8_01856327-524
MLKi8_02014403-592
MLKi8_02280479-630
MLKi8_02624475-655
MLKi8_02636117-285
349-528
MLKi8_02813663-837
MLKi8_03300470-595
611-729
MLKi8_03453111-309
Methanospirillum hungatei, GP1 MhGP1_00192120-319
MhGP1_00311350-524
MhGP1_00759223-371
MhGP1_0090062-284
MhGP1_01828579-722
MhGP1_02064308-492
MhGP1_02162520-679
MhGP1_02435623-804
MhGP1_02764531-679
MhGP1_02765665-833
MhGP1_02784468-666
MhGP1_02937392-558
Methanospirillum stamsii, Pt1 MLKi8_00433286-500
MLKi8_00496109-307
MLKi8_01032225-371
MLKi8_0115365-285
MLKi8_02935437-632
MLKi8_02954664-836
MLKi8_03227618-807
MLKi8_03415530-698
MLKi8_03713234-377
395-520
527-685
Syntrophomonas wolfei, saponavida Swsap_0144333-206
Swsap_03332532-708
Sphingomonas sp., CR2A3 PaGL#62_02792131-282
Methanospirillum.hungatei GP1, MhGP1 8064046744:MhGP1_00119468-666
8064046764:MhGP1_00138665-833
8064046765:MhGP1_00139531-679
8064047102:MhGP1_00468623-804
8064047384:MhGP1_00741520-679
8064047484:MhGP1_00839308-492
8064047722:MhGP1_01075579-722
8064048675:MhGP1_0200262-284
8064048817:MhGP1_02143223-371
8064049278:MhGP1_02591350-524
8064049396:MhGP1_02710120-319
8064049905:MhGP1_03209392-558
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111282:Mhun_01283174-389
Ga0065338_111536:Mhun_01537616-803
Ga0065338_111854:Mhun_01856664-833
Ga0065338_111874:Mhun_01875427-625
Ga0065338_112753:Mhun_02749116-313
Ga0065338_113282:Mhun_03279247-402
Ga0065338_113455:Mhun_0345162-285

PF07510:GmrSD_C. GmrSD restriction endonucleases, C-terminal domain

Found 41 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510061679:NJMEOJLD_01895441-576
Ruminococcus albus_7, DSM 20455 WP_013499115.1:HCIAFFOI_02574460-597
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112358:GJLLLGJL_02311454-588
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698242.1:PROKKA_01157421-552
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00847454-588
OINOEOOJ_01664419-494
FD_25_27, AnGL8 AnGL8_02453578-705
FD_YE_37_8_2, AnGL3 AnGL3_00583476-592
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00163454-588
Sespor_01974419-494
Terrisporobacter hibernicus, AnGL54 AnGL54_00254480-562
FD-MS-7-8, AnGL9 AnGL9_02224495-605
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_02632414-550
Syntrophomonas erecta, GB-438 Ga0610585_00847454-588
Ga0610585_01664419-494
Variovorax paradoxus, 2u118 PaGL#32_00268441-588
Dietzia cinnamea, 55 PaGL#56_00046488-607
PaGL#56_00526116-253
PaGL#56_01929168-258
Maridesulfovibrio salexigens, AnGL23 AnGL23_02933495-617
Exiguobacterium mexicanum, AnGL24 AnGL24_00082100-194
Methanospirillum lacunae, Ki8-1 MLKi8_00013417-556
MLKi8_03479422-569
Geodermatophilus sp., RDM14 PaGL#36_0123298-237
PaGL#36_03041312-448
Methanospirillum hungatei, GP1 MhGP1_00217423-569
MhGP1_02569418-561
Methanospirillum stamsii, Pt1 MLKi8_00521421-569
MLKi8_01810416-554
Peribacillus frigoritolerans, 30N-5 PaGL#67_01495411-547
PaGL#67_03234430-557
Micromonospora inositola, Utrum1 PaGL#61_0285798-203
PaGL#61_03219118-214
PaGL#61_04899130-215
PaGL#61_06894100-207
Methanospirillum.hungatei GP1, MhGP1 8064046964:MhGP1_00334418-561
8064049371:MhGP1_02685423-569
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112777:Mhun_02773421-568
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112358:Swol_02311454-588
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1282:Szehn_01661437-560
Mucilaginibacter gossypii, cycad 4 PaGL#42_00459443-587

PF07705:CARDB. CARDB

Found 130 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_014522610.1:LOMAGDGF_010572670-2774
2866-2969
3003-3082
3106-3186
3203-3295
4713-4815
4845-4929
4942-5044
Acetivibrio alkalicellulosi, DSM 17461 2510059821:NJMEOJLD_000842620-2723
2756-2836
2859-2941
2957-3043
4439-4540
4571-4657
4668-4770
2510060336:NJMEOJLD_005852258-2361
2398-2474
2497-2580
2594-2681
4095-4198
4226-4314
4325-4426
2510061783:NJMEOJLD_019972565-2667
2698-2780
2807-2882
2902-2993
4407-4510
4539-4626
4637-4739
NJMEOJLD_026231662-1765
1858-1961
1990-2073
2098-2179
2195-2286
3679-3782
3808-3898
3909-4011
2510062987:NJMEOJLD_031732389-2497
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753012.1:NEIHKHHH_00510118-221
231-333
356-437
454-545
WP_152965898.1:NEIHKHHH_0051220-122
150-238
249-351
362-469
WP_082225115.1:NEIHKHHH_007263418-3510
WP_050753132.1:NEIHKHHH_010681999-2090
WP_050753201.1:NEIHKHHH_01377455-548
WP_242857068.1:NEIHKHHH_0148096-178
202-281
299-386
1807-1909
1939-2025
2036-2137
2150-2245
WP_050753324.1:NEIHKHHH_020033141-3245
3268-3356
3380-3461
3478-3571
4972-5075
5104-5187
5212-5292
5345-5439
WP_036940084.1:NEIHKHHH_05780385-495
WP_036940087.1:NEIHKHHH_05781386-494
Paenibacillus guangzhouensis, KCTC 33171 WP_227793231.1:KDFAKKPF_03363421-522
534-634
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696627.1:PROKKA_01352397-492
FD_YE_37_3, AnGL26 AnGL26_00303480-582
Syntrophus buswellii, Sbus Sbus_0223789-193
Sunxiuqinia elliptica, AnGL22 AnGL22_00304480-582
Methanospirillum lacunae, Ki8-1 MLKi8_00521476-583
MLKi8_00639190-271
MLKi8_00902151-252
MLKi8_01772318-395
MLKi8_0198029-123
MLKi8_02143152-261
MLKi8_02273151-258
296-406
494-603
722-831
MLKi8_0248537-139
414-518
Methanospirillum hungatei, GP1 MhGP1_0075976-170
501-609
MhGP1_00794141-248
MhGP1_0211034-122
MhGP1_02536148-255
294-403
426-533
MhGP1_02589188-267
MhGP1_0270939-135
172-275
MhGP1_0271558-140
Methanospirillum stamsii, Pt1 MLKi8_00224264-353
MLKi8_0103276-170
491-599
MLKi8_01056148-248
MLKi8_01110351-459
597-697
972-1077
MLKi8_02086319-432
MLKi8_02088211-324
MLKi8_03010166-274
MLKi8_03070135-243
281-390
412-520
Micromonospora inositola, Utrum1 PaGL#61_02945640-741
PaGL#61_04220242-329
Methanospirillum.hungatei GP1, MhGP1 8064046814:MhGP1_0018858-140
8064046820:MhGP1_0019439-135
172-275
8064046941:MhGP1_00314188-267
8064047000:MhGP1_00367148-255
294-403
426-533
8064047438:MhGP1_0079334-122
8064048782:MhGP1_02108141-248
8064048817:MhGP1_0214376-170
501-609
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111374:Mhun_01374146-253
292-402
427-535
Ga0065338_111803:Mhun_01805303-410
427-522
Ga0065338_112535:Mhun_0253356-155
Ga0065338_113282:Mhun_03279110-204
532-643
Ga0065338_113318:Mhun_03315141-248
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA