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PaGL#33_01307 Locus tags: • Sequence Length: 444

Variovorax sp., EBFNA2 Batch2_genome_fasta/V.boronicumulans

5050100100150150200200250250300300350350400400450450
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PaGL#33_01302 PaGL#33_01303 PaGL#33_01305 PaGL#33_01306 PaGL#33_01307 PaGL#33_01310 PaGL#33_01311 PaGL#33_01312 
    [PF05201]_[PF01488]_[PF00745]

    [5:PF05201]_[174:PF01488]_[322:PF00745]

    [0:IPR036343]_[5:IPR015895]_[165:IPR036291]_[174:IPR006151]_[319:IPR036453]_[322:IPR015896]

Looking for similar signatures in the working genomes

PF05201:GlutR_N. Glutamyl-tRNAGlu reductase, N-terminal domain

Found 59 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513114.1:LOMAGDGF_001136-153
Clostridium acetobutylicum, DSM 1731 WP_010963422.1:FHOCHPCF_001069-146
Acetivibrio alkalicellulosi, DSM 17461 2510063502:NJMEOJLD_036816-153
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939061.1:NEIHKHHH_033195-156
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11713:GJLLLGJL_006986-156
Paenibacillus guangzhouensis, KCTC 33171 WP_152391697.1:KDFAKKPF_000905-156
Clostridium acetobutylicum, ATCC 824 WP_010963422.1:OJAMHIDJ_001069-146
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696093.1:PROKKA_019505-154
WP_137698967.1:PROKKA_031746-152
Syntrophomonas erecta, DSM 16215 OINOEOOJ_011966-156
OINOEOOJ_020646-156
FD_25_22, AnGL7 AnGL7_015075-154
FD_25_27, AnGL8 AnGL8_017415-154
FD_MS_7_1, AnGL28 AnGL28_00820164-309
FD_SO4_37_1, AnGL2 AnGL2_03499164-309
FD_YE_25_21, AnGL21 AnGL21_023765-154
FD_YE_37_3, AnGL26 AnGL26_035434-156
FD_YE_37_8_2, AnGL3 AnGL3_012554-153
Syntrophus buswellii, Sbus Sbus_020375-158
Syntrophomonas curvata, Scurva Scurva_011356-156
Syntrophomonas erecta sporosyntropha, Sespor Sespor_015086-156
Sespor_024496-156
Syntrophomonas wolfei methylbutyratica, Swm Swm_007536-156
FD-25-21, AnGL21 AnGL21_010495-154
Sunxiuqinia elliptica, AnGL22 AnGL22_035384-156
Paraclostridium benzoelyticum, AnGL27 AnGL27_035465-153
FD-MS-7-8, AnGL9 AnGL9_00075165-310
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_015576-160
Syntrophomonas erecta, GB-438 Ga0610585_011966-156
Ga0610585_020646-156
Variovorax sp., EBFNA2 PaGL#33_013075-159
Variovorax paradoxus, 2u118 PaGL#32_042925-159
Dietzia cinnamea, 55 PaGL#56_026531-151
Maridesulfovibrio salexigens, AnGL23 AnGL23_013367-154
Exiguobacterium mexicanum, AnGL24 AnGL24_009855-156
Clostridium subterminale, CB-LS10-1 AnGL53_016538-148
Priestia megaterium, 10L1 PaGL#57_028665-156
Variovorax paradoxus, SPNA7 PaGL#43_044535-159
Methanospirillum lacunae, Ki8-1 MLKi8_0137212-146
Geodermatophilus sp., RDM14 PaGL#36_038645-156
Fictibacillus phosphorivorans, TY7 PaGL#38_034535-156
Methanospirillum hungatei, GP1 MhGP1_0159512-144
Methanospirillum stamsii, Pt1 MLKi8_0196912-144
Syntrophomonas wolfei, saponavida Swsap_003256-156
Bacillus subtilis, 30VD-1 PaGL#66_015255-156
Peribacillus frigoritolerans, 30N-5 PaGL#67_019605-156
Micromonospora inositola, Utrum1 PaGL#61_065435-156
Niallia taxi, AG-1 PaGL#37_028805-156
Methanospirillum.hungatei GP1, MhGP1 8064047963:MhGP1_0130712-144
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_1197:Mhun_0009712-143
MPOB, Sfum 639702357:Sfum_016396-158
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11648:Spalm_022106-156
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11713:Swol_006986-156
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13841:Szehn_021536-156
Ga0124040_12547:Szehn_012296-156
Syntrophus aciditrophicus, SB 637858881:SYN_005375-158
Syntrophus gentianae, DSM8423 Ga0074853_13623:Sgen_030355-158
Mucilaginibacter gossypii, cycad 4 PaGL#42_0376126-180
Ruminococcus callidus, ATCC 27760 Rcal_019141-155

PF01488:Shikimate_DH. Shikimate / quinate 5-dehydrogenase

Found 97 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513114.1:LOMAGDGF_00113173-291
WP_003517153.1:LOMAGDGF_01413125-207
Clostridium acetobutylicum, DSM 1731 WP_010963422.1:FHOCHPCF_00106165-283
FHOCHPCF_00944211-279
Acetivibrio alkalicellulosi, DSM 17461 2510061626:NJMEOJLD_01843125-206
2510063502:NJMEOJLD_03681172-295
Pseudobacteroides cellulosolvens, DSM 2933 WP_242853069.1:NEIHKHHH_01999122-205
WP_036939012.1:NEIHKHHH_03287144-229
WP_036939061.1:NEIHKHHH_03319171-303
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11713:GJLLLGJL_00698170-306
Paenibacillus guangzhouensis, KCTC 33171 WP_152391697.1:KDFAKKPF_00090170-306
WP_152392105.1:KDFAKKPF_00543124-204
Clostridium acetobutylicum, ATCC 824 WP_010963422.1:OJAMHIDJ_00106165-283
OJAMHIDJ_00947211-279
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696093.1:PROKKA_01950179-304
WP_137695945.1:PROKKA_02104125-205
WP_137698967.1:PROKKA_03174169-295
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01196170-306
OINOEOOJ_02064170-305
FD_25_22, AnGL7 AnGL7_00085113-191
AnGL7_01507169-304
FD_25_27, AnGL8 AnGL8_01264111-192
AnGL8_01741169-306
FD_MS_7_1, AnGL28 AnGL28_00820330-455
FD_SO4_37_1, AnGL2 AnGL2_03499330-455
FD_YE_25_21, AnGL21 AnGL21_02376169-304
AnGL21_03101119-196
FD_YE_37_3, AnGL26 AnGL26_03543172-303
FD_YE_37_8_2, AnGL3 AnGL3_01255171-301
FD_YE_37_9_2, AnGL4 AnGL4_00100127-205
Syntrophus buswellii, Sbus Sbus_01190112-187
Sbus_02037172-307
Syntrophomonas curvata, Scurva Scurva_01135170-306
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01508170-305
Sespor_02449170-306
Syntrophomonas wolfei methylbutyratica, Swm Swm_00753170-306
Terrisporobacter hibernicus, AnGL54 AnGL54_02087120-198
FD-25-21, AnGL21 AnGL21_01049169-304
AnGL21_02535113-191
Sunxiuqinia elliptica, AnGL22 AnGL22_03538172-303
Paraclostridium benzoelyticum, AnGL27 AnGL27_03174120-198
AnGL27_03546170-299
FD-MS-7-8, AnGL9 AnGL9_00075332-456
FD-YE-37-9-3, AnGL29 AnGL29_00825127-205
Methylobacterium radiotolerans, GTSA1 PaGL#34_00568132-200
PaGL#34_04730127-197
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01557182-309
Syntrophomonas erecta, GB-438 Ga0610585_01196170-306
Ga0610585_02064170-305
Variovorax sp., EBFNA2 PaGL#33_00856123-203
PaGL#33_01307174-309
Variovorax paradoxus, 2u118 PaGL#32_00874122-203
PaGL#32_06385127-200
PaGL#32_04292174-309
Dietzia cinnamea, 55 PaGL#56_02653187-319
Maridesulfovibrio salexigens, AnGL23 AnGL23_01336168-304
AnGL23_03269121-189
Exiguobacterium mexicanum, AnGL24 AnGL24_00876115-180
AnGL24_00985171-305
Clostridium subterminale, CB-LS10-1 AnGL53_00709114-175
AnGL53_01653161-299
Priestia megaterium, 10L1 PaGL#57_02866170-305
PaGL#57_02966111-194
Variovorax paradoxus, SPNA7 PaGL#43_06332127-177
PaGL#43_00865122-203
PaGL#43_04453174-309
PaGL#43_04955116-193
Methanospirillum lacunae, Ki8-1 MLKi8_01372161-302
Geodermatophilus sp., RDM14 PaGL#36_03864174-299
Methylorubrum populi, CTY4 PaGL#39_01338123-193
Fictibacillus phosphorivorans, TY7 PaGL#38_03147110-193
PaGL#38_03453170-306
Methanospirillum hungatei, GP1 MhGP1_01595161-302
Methanospirillum stamsii, Pt1 MLKi8_01969161-302
Syntrophomonas wolfei, saponavida Swsap_00325170-306
Bacillus subtilis, 30VD-1 PaGL#66_01525170-306
PaGL#66_01723117-194
Peribacillus frigoritolerans, 30N-5 PaGL#67_01960170-306
PaGL#67_02127110-194
Micromonospora inositola, Utrum1 PaGL#61_06543171-308
Sphingomonas sp., CR2A3 PaGL#62_02661119-168
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_02890120-198
Niallia taxi, AG-1 PaGL#37_02758110-191
PaGL#37_02880170-306
Methanospirillum.hungatei GP1, MhGP1 8064047963:MhGP1_01307161-302
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_1197:Mhun_00097161-302
MPOB, Sfum 639702357:Sfum_01639172-308
639703492:Sfum_02797111-191
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11648:Spalm_02210170-306
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11713:Swol_00698170-306
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13841:Szehn_02153170-305
Ga0124040_12547:Szehn_01229170-306
Syntrophus aciditrophicus, SB 637858881:SYN_00537172-307
Syntrophus gentianae, DSM8423 Ga0074853_13623:Sgen_03035172-307
Ga0074853_105127:Sgen_00947126-189
Mucilaginibacter gossypii, cycad 4 PaGL#42_03761201-328
Ruminococcus callidus, ATCC 27760 Rcal_01914173-298

PF00745:GlutR_dimer. Glutamyl-tRNAGlu reductase, dimerisation domain

Found 51 similar signatures
Clostridium acetobutylicum, DSM 1731 WP_010963422.1:FHOCHPCF_00106301-395
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939061.1:NEIHKHHH_03319319-415
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11713:GJLLLGJL_00698320-419
Paenibacillus guangzhouensis, KCTC 33171 WP_152391697.1:KDFAKKPF_00090319-419
Clostridium acetobutylicum, ATCC 824 WP_010963422.1:OJAMHIDJ_00106301-395
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01196320-419
OINOEOOJ_02064319-419
FD_25_22, AnGL7 AnGL7_01507317-407
FD_25_27, AnGL8 AnGL8_01741319-416
FD_YE_25_21, AnGL21 AnGL21_02376317-414
FD_YE_37_3, AnGL26 AnGL26_03543317-412
FD_YE_37_8_2, AnGL3 AnGL3_01255315-410
Syntrophus buswellii, Sbus Sbus_02037321-421
Syntrophomonas curvata, Scurva Scurva_01135319-419
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01508319-419
Sespor_02449320-419
Syntrophomonas wolfei methylbutyratica, Swm Swm_00753319-419
FD-25-21, AnGL21 AnGL21_01049317-407
Sunxiuqinia elliptica, AnGL22 AnGL22_03538317-412
Paraclostridium benzoelyticum, AnGL27 AnGL27_03546314-411
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01557323-403
Syntrophomonas erecta, GB-438 Ga0610585_01196320-419
Ga0610585_02064319-419
Variovorax sp., EBFNA2 PaGL#33_01307322-418
Variovorax paradoxus, 2u118 PaGL#32_04292322-418
Dietzia cinnamea, 55 PaGL#56_02653333-432
Maridesulfovibrio salexigens, AnGL23 AnGL23_01336317-418
Exiguobacterium mexicanum, AnGL24 AnGL24_00985320-418
Clostridium subterminale, CB-LS10-1 AnGL53_01653316-408
Priestia megaterium, 10L1 PaGL#57_02866320-419
Variovorax paradoxus, SPNA7 PaGL#43_04453322-418
Methanospirillum lacunae, Ki8-1 MLKi8_01372316-399
Geodermatophilus sp., RDM14 PaGL#36_03864323-422
Fictibacillus phosphorivorans, TY7 PaGL#38_03453319-419
Methanospirillum hungatei, GP1 MhGP1_01595315-401
Methanospirillum stamsii, Pt1 MLKi8_01969316-405
Syntrophomonas wolfei, saponavida Swsap_00325319-419
Bacillus subtilis, 30VD-1 PaGL#66_01525319-418
Peribacillus frigoritolerans, 30N-5 PaGL#67_01960319-419
Micromonospora inositola, Utrum1 PaGL#61_06543321-420
Niallia taxi, AG-1 PaGL#37_02880322-419
Methanospirillum.hungatei GP1, MhGP1 8064047963:MhGP1_01307315-401
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_1197:Mhun_00097315-401
MPOB, Sfum 639702357:Sfum_01639321-421
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11648:Spalm_02210320-419
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11713:Swol_00698320-419
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13841:Szehn_02153320-419
Ga0124040_12547:Szehn_01229320-419
Syntrophus aciditrophicus, SB 637858881:SYN_00537321-421
Syntrophus gentianae, DSM8423 Ga0074853_13623:Sgen_03035321-421
Mucilaginibacter gossypii, cycad 4 PaGL#42_03761342-422
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