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AnGL4_00100 Locus tags: • Sequence Length: 310

FD_YE_37_9_2, AnGL4 Batch1_genome_fasta/FD_YE_37_9_2

5050100100150150200200250250300300350350
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AnGL4_00096 AnGL4_00097 AnGL4_00100 AnGL4_00102 AnGL4_00103 AnGL4_00104 AnGL4_00105 
    [PF08501]_[PF01488]

    [16:PF08501]_[127:PF01488]

    [4:IPR046346]_[16:IPR013708]_[111:IPR036291]_[127:IPR006151]

Looking for similar signatures in the working genomes

PF08501:Shikimate_dh_N. Shikimate dehydrogenase substrate binding domain

Found 79 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003517153.1:LOMAGDGF_0141315-98
Clostridium acetobutylicum, DSM 1731 FHOCHPCF_00944102-185
Acetivibrio alkalicellulosi, DSM 17461 2510061626:NJMEOJLD_0184315-98
Pseudobacteroides cellulosolvens, DSM 2933 WP_242853069.1:NEIHKHHH_0199913-96
Ruminococcus albus_7, DSM 20455 WP_037305241.1:HCIAFFOI_0001923-104
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_0053511-94
Paenibacillus guangzhouensis, KCTC 33171 WP_152392105.1:KDFAKKPF_0054317-100
Clostridium acetobutylicum, ATCC 824 OJAMHIDJ_00947102-185
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695945.1:PROKKA_0210415-98
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0138112-95
FD_25_22, AnGL7 AnGL7_0004025-93
AnGL7_000855-88
FD_25_27, AnGL8 AnGL8_012645-88
FD_MS_7_1, AnGL28 AnGL28_0068211-94
FD_SO4_25_1_F22, AnGL30 AnGL30_001726-89
FD_SO4_37_1, AnGL2 AnGL2_0336111-94
FD_YE_25_21, AnGL21 AnGL21_031019-92
FD_YE_37_3, AnGL26 AnGL26_038595-88
FD_YE_37_8_2, AnGL3 AnGL3_002955-87
FD_YE_37_9_2, AnGL4 AnGL4_0010016-99
Syntrophus buswellii, Sbus Sbus_0119012-93
Syntrophomonas curvata, Scurva Scurva_0098711-94
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0225712-95
Syntrophomonas wolfei methylbutyratica, Swm Swm_0056811-94
Terrisporobacter hibernicus, AnGL54 AnGL54_0208711-94
FD-25-21, AnGL21 AnGL21_025355-88
AnGL21_0258025-93
Sunxiuqinia elliptica, AnGL22 AnGL22_038555-88
Paraclostridium benzoelyticum, AnGL27 AnGL27_0317411-94
FD-MS-7-8, AnGL9 AnGL9_0099511-94
FD-YE-37-9-3, AnGL29 AnGL29_0082516-99
Methylobacterium radiotolerans, GTSA1 PaGL#34_0056818-102
PaGL#34_047309-92
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_000775-88
Syntrophomonas erecta, GB-438 Ga0610585_0138112-95
Variovorax sp., EBFNA2 PaGL#33_008565-94
PaGL#33_0235515-97
PaGL#33_0235611-94
Variovorax paradoxus, 2u118 PaGL#32_008745-94
PaGL#32_0638514-97
PaGL#32_0343112-94
PaGL#32_0343515-97
Dietzia cinnamea, 55 PaGL#56_0166516-99
Maridesulfovibrio salexigens, AnGL23 AnGL23_0326911-94
Exiguobacterium mexicanum, AnGL24 AnGL24_008764-87
Clostridium subterminale, CB-LS10-1 AnGL53_007095-88
Priestia megaterium, 10L1 PaGL#57_029666-89
PaGL#57_0645815-98
Variovorax paradoxus, SPNA7 PaGL#43_0633214-97
PaGL#43_008655-94
PaGL#43_0346912-94
PaGL#43_0347315-97
PaGL#43_049556-88
Methanospirillum lacunae, Ki8-1 MLKi8_02329212-293
Geodermatophilus sp., RDM14 PaGL#36_020864-87
PaGL#36_0266311-99
Methylorubrum populi, CTY4 PaGL#39_013386-89
Fictibacillus phosphorivorans, TY7 PaGL#38_031475-88
Methanospirillum hungatei, GP1 MhGP1_02205209-290
Methanospirillum stamsii, Pt1 MLKi8_02828209-290
Syntrophomonas wolfei, saponavida Swsap_0044811-94
Bacillus subtilis, 30VD-1 PaGL#66_017236-89
Peribacillus frigoritolerans, 30N-5 PaGL#67_021276-89
PaGL#67_0522915-98
Micromonospora inositola, Utrum1 PaGL#61_024624-87
Sphingomonas sp., CR2A3 PaGL#62_0266110-94
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0289011-94
Niallia taxi, AG-1 PaGL#37_0417817-100
PaGL#37_027585-88
Methanospirillum.hungatei GP1, MhGP1 8064047341:MhGP1_00698209-290
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111945:Mhun_01946209-290
MPOB, Sfum 639703492:Sfum_0279711-92
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10254:Spalm_0033611-94
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_0053511-94
Syntrophomonas zehnderi, OL-4 Szehn Szehn_0125410-93
Syntrophus aciditrophicus, SB 637860157:SYN_0173126-107
Syntrophus gentianae, DSM8423 Ga0074853_105127:Sgen_0094726-107
Mucilaginibacter gossypii, cycad 4 PaGL#42_042755-88
Ruminococcus callidus, ATCC 27760 Rcal_002135-86

PF01488:Shikimate_DH. Shikimate / quinate 5-dehydrogenase

Found 97 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513114.1:LOMAGDGF_00113173-291
WP_003517153.1:LOMAGDGF_01413125-207
Clostridium acetobutylicum, DSM 1731 WP_010963422.1:FHOCHPCF_00106165-283
FHOCHPCF_00944211-279
Acetivibrio alkalicellulosi, DSM 17461 2510061626:NJMEOJLD_01843125-206
2510063502:NJMEOJLD_03681172-295
Pseudobacteroides cellulosolvens, DSM 2933 WP_242853069.1:NEIHKHHH_01999122-205
WP_036939012.1:NEIHKHHH_03287144-229
WP_036939061.1:NEIHKHHH_03319171-303
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11713:GJLLLGJL_00698170-306
Paenibacillus guangzhouensis, KCTC 33171 WP_152391697.1:KDFAKKPF_00090170-306
WP_152392105.1:KDFAKKPF_00543124-204
Clostridium acetobutylicum, ATCC 824 WP_010963422.1:OJAMHIDJ_00106165-283
OJAMHIDJ_00947211-279
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696093.1:PROKKA_01950179-304
WP_137695945.1:PROKKA_02104125-205
WP_137698967.1:PROKKA_03174169-295
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01196170-306
OINOEOOJ_02064170-305
FD_25_22, AnGL7 AnGL7_00085113-191
AnGL7_01507169-304
FD_25_27, AnGL8 AnGL8_01264111-192
AnGL8_01741169-306
FD_MS_7_1, AnGL28 AnGL28_00820330-455
FD_SO4_37_1, AnGL2 AnGL2_03499330-455
FD_YE_25_21, AnGL21 AnGL21_02376169-304
AnGL21_03101119-196
FD_YE_37_3, AnGL26 AnGL26_03543172-303
FD_YE_37_8_2, AnGL3 AnGL3_01255171-301
FD_YE_37_9_2, AnGL4 AnGL4_00100127-205
Syntrophus buswellii, Sbus Sbus_01190112-187
Sbus_02037172-307
Syntrophomonas curvata, Scurva Scurva_01135170-306
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01508170-305
Sespor_02449170-306
Syntrophomonas wolfei methylbutyratica, Swm Swm_00753170-306
Terrisporobacter hibernicus, AnGL54 AnGL54_02087120-198
FD-25-21, AnGL21 AnGL21_01049169-304
AnGL21_02535113-191
Sunxiuqinia elliptica, AnGL22 AnGL22_03538172-303
Paraclostridium benzoelyticum, AnGL27 AnGL27_03174120-198
AnGL27_03546170-299
FD-MS-7-8, AnGL9 AnGL9_00075332-456
FD-YE-37-9-3, AnGL29 AnGL29_00825127-205
Methylobacterium radiotolerans, GTSA1 PaGL#34_00568132-200
PaGL#34_04730127-197
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01557182-309
Syntrophomonas erecta, GB-438 Ga0610585_01196170-306
Ga0610585_02064170-305
Variovorax sp., EBFNA2 PaGL#33_00856123-203
PaGL#33_01307174-309
Variovorax paradoxus, 2u118 PaGL#32_00874122-203
PaGL#32_06385127-200
PaGL#32_04292174-309
Dietzia cinnamea, 55 PaGL#56_02653187-319
Maridesulfovibrio salexigens, AnGL23 AnGL23_01336168-304
AnGL23_03269121-189
Exiguobacterium mexicanum, AnGL24 AnGL24_00876115-180
AnGL24_00985171-305
Clostridium subterminale, CB-LS10-1 AnGL53_00709114-175
AnGL53_01653161-299
Priestia megaterium, 10L1 PaGL#57_02866170-305
PaGL#57_02966111-194
Variovorax paradoxus, SPNA7 PaGL#43_06332127-177
PaGL#43_00865122-203
PaGL#43_04453174-309
PaGL#43_04955116-193
Methanospirillum lacunae, Ki8-1 MLKi8_01372161-302
Geodermatophilus sp., RDM14 PaGL#36_03864174-299
Methylorubrum populi, CTY4 PaGL#39_01338123-193
Fictibacillus phosphorivorans, TY7 PaGL#38_03147110-193
PaGL#38_03453170-306
Methanospirillum hungatei, GP1 MhGP1_01595161-302
Methanospirillum stamsii, Pt1 MLKi8_01969161-302
Syntrophomonas wolfei, saponavida Swsap_00325170-306
Bacillus subtilis, 30VD-1 PaGL#66_01525170-306
PaGL#66_01723117-194
Peribacillus frigoritolerans, 30N-5 PaGL#67_01960170-306
PaGL#67_02127110-194
Micromonospora inositola, Utrum1 PaGL#61_06543171-308
Sphingomonas sp., CR2A3 PaGL#62_02661119-168
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_02890120-198
Niallia taxi, AG-1 PaGL#37_02758110-191
PaGL#37_02880170-306
Methanospirillum.hungatei GP1, MhGP1 8064047963:MhGP1_01307161-302
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_1197:Mhun_00097161-302
MPOB, Sfum 639702357:Sfum_01639172-308
639703492:Sfum_02797111-191
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11648:Spalm_02210170-306
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11713:Swol_00698170-306
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13841:Szehn_02153170-305
Ga0124040_12547:Szehn_01229170-306
Syntrophus aciditrophicus, SB 637858881:SYN_00537172-307
Syntrophus gentianae, DSM8423 Ga0074853_13623:Sgen_03035172-307
Ga0074853_105127:Sgen_00947126-189
Mucilaginibacter gossypii, cycad 4 PaGL#42_03761201-328
Ruminococcus callidus, ATCC 27760 Rcal_01914173-298
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