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PaGL#33_05096 Locus tags: • Sequence Length: 411

Variovorax sp., EBFNA2 Batch2_genome_fasta/V.boronicumulans

5050100100150150200200250250300300350350400400450450
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PaGL#33_05091 PaGL#33_05093 PaGL#33_05095 PaGL#33_05096 PaGL#33_05098 PaGL#33_05099 
    [SP]_[PF02790]_[PF00116]_[PF13442]_[TM]

    [SP]_[36:PF02790]_[133:PF00116]_[295:PF13442]_[TM]

    [SP]_[34:IPR011759]_[35:IPR036257]_[36:IPR011759]_[127:IPR008972]_[130:IPR002429]_[133:IPR002429]_[279:IPR036909]_[293:IPR009056]_[295:IPR009056]_[TM]

Looking for similar signatures in the working genomes

PF02790:COX2_TM. Cytochrome C oxidase subunit II, transmembrane domain

Found 31 similar signatures
Paenibacillus guangzhouensis, KCTC 33171 WP_152393901.1:KDFAKKPF_0261637-110
WP_152395080.1:KDFAKKPF_0399144-105
WP_152396411.1:KDFAKKPF_0559036-111
FD_25_22, AnGL7 AnGL7_0121221-102
FD_YE_37_3, AnGL26 AnGL26_031258-77
FD-25-21, AnGL21 AnGL21_0135221-102
Sunxiuqinia elliptica, AnGL22 AnGL22_031218-77
Methylobacterium radiotolerans, GTSA1 PaGL#34_0013734-121
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01262115-197
Variovorax sp., EBFNA2 PaGL#33_0509636-121
Variovorax paradoxus, 2u118 PaGL#32_0443237-121
Dietzia cinnamea, 55 PaGL#56_0121042-122
Exiguobacterium mexicanum, AnGL24 AnGL24_0116449-108
Priestia megaterium, 10L1 PaGL#57_0432835-110
PaGL#57_0562747-109
PaGL#57_0607649-110
Variovorax paradoxus, SPNA7 PaGL#43_0459837-121
Geodermatophilus sp., RDM14 PaGL#36_0185030-110
Methylorubrum populi, CTY4 PaGL#39_0297134-120
Fictibacillus phosphorivorans, TY7 PaGL#38_0007231-107
PaGL#38_0084831-106
PaGL#38_0214549-109
Bacillus subtilis, 30VD-1 PaGL#66_0048748-124
PaGL#66_0264346-106
Peribacillus frigoritolerans, 30N-5 PaGL#67_0265840-114
PaGL#67_0410850-109
PaGL#67_0510447-105
Sphingomonas sp., CR2A3 PaGL#62_0262071-157
Niallia taxi, AG-1 PaGL#37_0566645-104
PaGL#37_0027931-108
Mucilaginibacter gossypii, cycad 4 PaGL#42_03923115-197

PF00116:COX2. Cytochrome C oxidase subunit II, periplasmic domain

Found 43 similar signatures
Paenibacillus guangzhouensis, KCTC 33171 WP_152393901.1:KDFAKKPF_02616153-228
WP_152395080.1:KDFAKKPF_03991145-220
WP_152396411.1:KDFAKKPF_05590149-227
FD_25_22, AnGL7 AnGL7_01212116-244
FD_YE_37_3, AnGL26 AnGL26_03125117-188
FD-25-21, AnGL21 AnGL21_01352116-244
Sunxiuqinia elliptica, AnGL22 AnGL22_03121117-188
Methylobacterium radiotolerans, GTSA1 PaGL#34_00137132-250
PaGL#34_06589162-236
PaGL#34_06712125-193
PaGL#34_01211125-194
PaGL#34_01967171-242
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01262217-353
Variovorax sp., EBFNA2 PaGL#33_0660095-167
PaGL#33_01408154-225
PaGL#33_01894119-193
PaGL#33_05096133-263
Variovorax paradoxus, 2u118 PaGL#32_02046121-197
PaGL#32_04126154-225
PaGL#32_04432133-263
Dietzia cinnamea, 55 PaGL#56_01210233-312
Exiguobacterium mexicanum, AnGL24 AnGL24_0068081-155
AnGL24_01164146-219
Priestia megaterium, 10L1 PaGL#57_05627150-226
PaGL#57_06076150-233
Variovorax paradoxus, SPNA7 PaGL#43_02156121-197
PaGL#43_04285154-225
PaGL#43_04598133-263
PaGL#43_05311115-237
Geodermatophilus sp., RDM14 PaGL#36_01850164-241
Methylorubrum populi, CTY4 PaGL#39_00023126-194
PaGL#39_02971133-250
PaGL#39_04232204-276
Fictibacillus phosphorivorans, TY7 PaGL#38_00072145-212
PaGL#38_00848144-211
PaGL#38_02145148-229
Bacillus subtilis, 30VD-1 PaGL#66_00487162-233
PaGL#66_02643153-234
Peribacillus frigoritolerans, 30N-5 PaGL#67_04108157-236
Micromonospora inositola, Utrum1 PaGL#61_03766152-226
PaGL#61_05422153-263
Sphingomonas sp., CR2A3 PaGL#62_02620170-298
Mucilaginibacter gossypii, cycad 4 PaGL#42_03923214-350

PF13442:Cytochrome_CBB3. Cytochrome C oxidase, cbb3-type, subunit III

Found 156 similar signatures
Paenibacillus guangzhouensis, KCTC 33171 WP_227793546.1:KDFAKKPF_0227856-123
WP_152393896.1:KDFAKKPF_0261138-107
WP_152393934.1:KDFAKKPF_02650220-286
WP_152395725.1:KDFAKKPF_0479343-115
WP_227793362.1:KDFAKKPF_0565643-112
FD_25_22, AnGL7 AnGL7_0016862-137
AnGL7_01212281-355
446-520
AnGL7_02593150-225
242-312
FD_MS_7_1, AnGL28 AnGL28_02985371-452
492-578
AnGL28_0347218-91
FD_SO4_37_1, AnGL2 AnGL2_02114371-452
492-578
AnGL2_0260218-91
FD_YE_25_21, AnGL21 AnGL21_0003158-133
AnGL21_0073032-98
AnGL21_01573154-228
242-316
FD_YE_37_3, AnGL26 AnGL26_0014748-132
AnGL26_0026354-135
AnGL26_0065223-96
AnGL26_03119100-182
AnGL26_03133110-184
AnGL26_0328530-100
FD-25-21, AnGL21 AnGL21_00069150-225
242-312
AnGL21_01352281-355
438-512
AnGL21_0245162-137
Sunxiuqinia elliptica, AnGL22 AnGL22_0014848-132
AnGL22_0026454-135
AnGL22_0065323-96
AnGL22_03115100-182
AnGL22_03129110-184
AnGL22_0328130-100
FD-MS-7-8, AnGL9 AnGL9_0078710-83
AnGL9_02874371-452
492-578
Methylobacterium radiotolerans, GTSA1 PaGL#34_0645759-141
PaGL#34_06685328-413
PaGL#34_0670972-153
PaGL#34_06712218-307
PaGL#34_0067792-156
PaGL#34_01211217-308
PaGL#34_0121469-150
PaGL#34_02094316-395
PaGL#34_0267158-136
PaGL#34_0279428-103
PaGL#34_0282228-105
PaGL#34_0384179-142
PaGL#34_0465278-152
PaGL#34_05893117-193
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0046636-120
PaGL#35_01260100-188
PaGL#35_0359534-114
PaGL#35_0361357-125
PaGL#35_04793491-559
PaGL#35_0527184-164
PaGL#35_06414470-556
Variovorax sp., EBFNA2 PaGL#33_0609479-171
PaGL#33_002441142-1222
PaGL#33_06598100-162
PaGL#33_06602326-411
PaGL#33_00972328-413
PaGL#33_01681129-210
PaGL#33_0189671-153
PaGL#33_0276421-93
PaGL#33_0406642-120
PaGL#33_04939131-206
226-293
PaGL#33_05096295-368
PaGL#33_0552993-168
PaGL#33_05717280-347
PaGL#33_05748624-699
Variovorax paradoxus, 2u118 PaGL#32_002101144-1224
PaGL#32_0573564-156
PaGL#32_0582429-109
PaGL#32_0610761-157
PaGL#32_0109041-119
PaGL#32_0204875-156
PaGL#32_02558130-206
227-293
PaGL#32_0305525-97
PaGL#32_0313644-117
PaGL#32_0399838-108
PaGL#32_04432295-368
PaGL#32_0450636-104
PaGL#32_04614324-410
PaGL#32_0480293-168
PaGL#32_05007612-687
Dietzia cinnamea, 55 PaGL#56_0122267-143
175-249
Maridesulfovibrio salexigens, AnGL23 AnGL23_0287328-93
Exiguobacterium mexicanum, AnGL24 AnGL24_01164250-332
AnGL24_01361182-253
AnGL24_0190643-109
AnGL24_0218839-106
Priestia megaterium, 10L1 PaGL#57_0245643-110
PaGL#57_0301147-115
PaGL#57_03240180-249
Variovorax paradoxus, SPNA7 PaGL#43_002051141-1221
PaGL#43_0574464-156
PaGL#43_0581130-110
PaGL#43_0604561-157
PaGL#43_0108941-119
PaGL#43_0215875-156
PaGL#43_02812130-206
227-293
PaGL#43_0310825-97
PaGL#43_0318944-117
PaGL#43_04007129-218
PaGL#43_0405339-109
PaGL#43_04598295-368
PaGL#43_0467436-104
PaGL#43_04756327-410
PaGL#43_0498193-168
PaGL#43_05205612-687
Geodermatophilus sp., RDM14 PaGL#36_0185482-158
175-249
Methylorubrum populi, CTY4 PaGL#39_0002072-153
PaGL#39_00023219-308
PaGL#39_0119534-112
PaGL#39_0160888-153
PaGL#39_0349255-137
PaGL#39_0402186-160
PaGL#39_0425056-134
PaGL#39_04754304-383
Fictibacillus phosphorivorans, TY7 PaGL#38_02791179-249
PaGL#38_0309541-110
Bacillus subtilis, 30VD-1 PaGL#66_0077739-108
PaGL#66_0177148-116
PaGL#66_02044179-249
Peribacillus frigoritolerans, 30N-5 PaGL#67_0055343-108
PaGL#67_0217950-118
PaGL#67_02414181-249
PaGL#67_0349946-112
Micromonospora inositola, Utrum1 PaGL#61_0377248-123
140-213
PaGL#61_0541562-139
157-231
Sphingomonas sp., CR2A3 PaGL#62_0018077-158
PaGL#62_0357350-139
183-269
MPOB, Sfum 639704010:Sfum_0332066-149
Mucilaginibacter gossypii, cycad 4 PaGL#42_00537195-269
PaGL#42_01859510-578
PaGL#42_0195472-154
PaGL#42_0201238-122
PaGL#42_0214334-96
PaGL#42_02413492-561
PaGL#42_02529189-274
PaGL#42_0355647-117
PaGL#42_03925100-188
PaGL#42_05053483-570
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