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PaGL#33_05784 Locus tags: • Sequence Length: 180

Variovorax sp., EBFNA2 Batch2_genome_fasta/V.boronicumulans

5050100100150150200200
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PaGL#33_05779 PaGL#33_05781 PaGL#33_05782 PaGL#33_05784 PaGL#33_05785 PaGL#33_05786 PaGL#33_05787 PaGL#33_05789 
    [PF00333]_[PF03719]

    [16:PF00333]_[92:PF03719]

    [16:IPR013810]_[16:IPR013810]_[84:IPR020568]_[92:IPR005324]

Looking for similar signatures in the working genomes

PF00333:Ribosomal_S5. Ribosomal protein S5, N-terminal domain

Found 63 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514656.1:LOMAGDGF_0047810-75
Clostridium acetobutylicum, DSM 1731 WP_010966395.1:FHOCHPCF_031619-73
Acetivibrio alkalicellulosi, DSM 17461 2510061255:NJMEOJLD_0148410-75
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945060.1:NEIHKHHH_0255210-75
Ruminococcus albus_7, DSM 20455 WP_013496812.1:HCIAFFOI_0005411-75
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112476:GJLLLGJL_0243112-75
Paenibacillus guangzhouensis, KCTC 33171 WP_018759696.1:KDFAKKPF_043959-74
Clostridium acetobutylicum, ATCC 824 WP_010966395.1:OJAMHIDJ_031709-73
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697977.1:PROKKA_0073311-76
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0240410-75
FD_25_22, AnGL7 AnGL7_0352611-75
FD_25_27, AnGL8 AnGL8_0129912-76
FD_MS_7_1, AnGL28 AnGL28_0284934-98
FD_SO4_25_1_F22, AnGL30 AnGL30_0093312-77
FD_SO4_37_1, AnGL2 AnGL2_0197834-98
FD_YE_25_21, AnGL21 AnGL21_0285313-77
FD_YE_37_3, AnGL26 AnGL26_0111414-79
FD_YE_37_8_2, AnGL3 AnGL3_0141015-80
FD_YE_37_9_2, AnGL4 AnGL4_0238212-77
Syntrophus buswellii, Sbus Sbus_0048811-75
Syntrophomonas curvata, Scurva Scurva_0279010-75
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0111310-75
Syntrophomonas wolfei methylbutyratica, Swm Swm_0281412-75
Terrisporobacter hibernicus, AnGL54 AnGL54_0329912-77
FD-25-21, AnGL21 AnGL21_0274611-75
Sunxiuqinia elliptica, AnGL22 AnGL22_0111614-79
Paraclostridium benzoelyticum, AnGL27 AnGL27_0076613-78
FD-MS-7-8, AnGL9 AnGL9_0303934-98
FD-YE-37-9-3, AnGL29 AnGL29_0310712-77
Methylobacterium radiotolerans, GTSA1 PaGL#34_0245523-86
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0588115-80
Syntrophomonas erecta, GB-438 Ga0610585_0240410-75
Variovorax sp., EBFNA2 PaGL#33_0578416-79
Variovorax paradoxus, 2u118 PaGL#32_0504216-80
Dietzia cinnamea, 55 PaGL#56_0232853-116
Maridesulfovibrio salexigens, AnGL23 AnGL23_020257-72
Exiguobacterium mexicanum, AnGL24 AnGL24_0295610-75
Clostridium subterminale, CB-LS10-1 AnGL53_033349-74
Priestia megaterium, 10L1 PaGL#57_0211010-75
Variovorax paradoxus, SPNA7 PaGL#43_0523816-80
Methanospirillum lacunae, Ki8-1 MLKi8_0042449-113
Geodermatophilus sp., RDM14 PaGL#36_0377137-101
Methylorubrum populi, CTY4 PaGL#39_0192920-83
Fictibacillus phosphorivorans, TY7 PaGL#38_005389-74
Methanospirillum hungatei, GP1 MhGP1_0064449-113
Methanospirillum stamsii, Pt1 MLKi8_0089349-113
Syntrophomonas wolfei, saponavida Swsap_0094710-75
Bacillus subtilis, 30VD-1 PaGL#66_0003512-77
Peribacillus frigoritolerans, 30N-5 PaGL#67_0011910-75
Micromonospora inositola, Utrum1 PaGL#61_0639838-101
Sphingomonas sp., CR2A3 PaGL#62_0350063-128
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0013512-77
Niallia taxi, AG-1 PaGL#37_0015612-77
Methanospirillum.hungatei GP1, MhGP1 8064048935:MhGP1_0225849-113
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113221:Mhun_0321849-113
MPOB, Sfum 639702339:Sfum_0162111-75
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_12619:Spalm_0270912-75
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112476:Swol_0243112-75
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_118113:Szehn_0106012-75
Syntrophus aciditrophicus, SB 637858627:SYN_0029612-75
Syntrophus gentianae, DSM8423 Sgen_0027211-75
Mucilaginibacter gossypii, cycad 4 PaGL#42_0588415-80
Ruminococcus callidus, ATCC 27760 Rcal_0013810-75

PF03719:Ribosomal_S5_C. Ribosomal protein S5, C-terminal domain

Found 63 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003514656.1:LOMAGDGF_0047886-157
Clostridium acetobutylicum, DSM 1731 WP_010966395.1:FHOCHPCF_0316185-156
Acetivibrio alkalicellulosi, DSM 17461 2510061255:NJMEOJLD_0148486-157
Pseudobacteroides cellulosolvens, DSM 2933 WP_036945060.1:NEIHKHHH_0255286-157
Ruminococcus albus_7, DSM 20455 WP_013496812.1:HCIAFFOI_0005487-158
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_112476:GJLLLGJL_0243188-158
Paenibacillus guangzhouensis, KCTC 33171 WP_018759696.1:KDFAKKPF_0439585-156
Clostridium acetobutylicum, ATCC 824 WP_010966395.1:OJAMHIDJ_0317085-156
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697977.1:PROKKA_0073387-158
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0240487-158
FD_25_22, AnGL7 AnGL7_0352687-158
FD_25_27, AnGL8 AnGL8_0129988-159
FD_MS_7_1, AnGL28 AnGL28_02849110-178
FD_SO4_25_1_F22, AnGL30 AnGL30_0093388-159
FD_SO4_37_1, AnGL2 AnGL2_01978110-178
FD_YE_25_21, AnGL21 AnGL21_0285389-160
FD_YE_37_3, AnGL26 AnGL26_0111490-161
FD_YE_37_8_2, AnGL3 AnGL3_0141091-162
FD_YE_37_9_2, AnGL4 AnGL4_0238289-160
Syntrophus buswellii, Sbus Sbus_0048886-157
Syntrophomonas curvata, Scurva Scurva_0279087-158
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0111387-158
Syntrophomonas wolfei methylbutyratica, Swm Swm_0281488-158
Terrisporobacter hibernicus, AnGL54 AnGL54_0329988-159
FD-25-21, AnGL21 AnGL21_0274687-158
Sunxiuqinia elliptica, AnGL22 AnGL22_0111690-161
Paraclostridium benzoelyticum, AnGL27 AnGL27_0076689-160
FD-MS-7-8, AnGL9 AnGL9_03039110-178
FD-YE-37-9-3, AnGL29 AnGL29_0310789-160
Methylobacterium radiotolerans, GTSA1 PaGL#34_0245599-170
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0588191-162
Syntrophomonas erecta, GB-438 Ga0610585_0240487-158
Variovorax sp., EBFNA2 PaGL#33_0578492-163
Variovorax paradoxus, 2u118 PaGL#32_0504292-163
Dietzia cinnamea, 55 PaGL#56_02328127-198
Maridesulfovibrio salexigens, AnGL23 AnGL23_0202583-153
Exiguobacterium mexicanum, AnGL24 AnGL24_0295686-157
Clostridium subterminale, CB-LS10-1 AnGL53_0333485-156
Priestia megaterium, 10L1 PaGL#57_0211086-157
Variovorax paradoxus, SPNA7 PaGL#43_0523892-163
Methanospirillum lacunae, Ki8-1 MLKi8_00424135-197
Geodermatophilus sp., RDM14 PaGL#36_03771112-183
Methylorubrum populi, CTY4 PaGL#39_0192996-167
Fictibacillus phosphorivorans, TY7 PaGL#38_0053885-156
Methanospirillum hungatei, GP1 MhGP1_00644134-197
Methanospirillum stamsii, Pt1 MLKi8_00893134-197
Syntrophomonas wolfei, saponavida Swsap_0094787-158
Bacillus subtilis, 30VD-1 PaGL#66_0003588-159
Peribacillus frigoritolerans, 30N-5 PaGL#67_0011986-157
Micromonospora inositola, Utrum1 PaGL#61_06398115-183
Sphingomonas sp., CR2A3 PaGL#62_03500140-211
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0013588-159
Niallia taxi, AG-1 PaGL#37_0015688-159
Methanospirillum.hungatei GP1, MhGP1 8064048935:MhGP1_02258134-197
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113221:Mhun_03218134-197
MPOB, Sfum 639702339:Sfum_0162186-157
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_027100-47
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_112476:Swol_0243188-158
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_118113:Szehn_0106087-158
Syntrophus aciditrophicus, SB 637858627:SYN_0029686-157
Syntrophus gentianae, DSM8423 Sgen_0027286-157
Mucilaginibacter gossypii, cycad 4 PaGL#42_0588491-162
Ruminococcus callidus, ATCC 27760 Rcal_0013886-157
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