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PaGL#32_02842 Locus tags: • Sequence Length: 584

Variovorax paradoxus, 2u118 Batch2_genome_fasta/V.paradoxus

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PaGL#32_02837 PaGL#32_02842 PaGL#32_02846 PaGL#32_02847 
    [PF13155]_[PF03796]

    [150:PF13155]_[283:PF03796]

    [147:IPR034154]_[275:IPR007694]_[281:IPR027417]_[283:IPR007694]

Looking for similar signatures in the working genomes

PF13155:Toprim_2. Toprim-like

Found 65 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003520929.1:LOMAGDGF_01368258-343
Clostridium acetobutylicum, DSM 1731 WP_010964611.1:FHOCHPCF_01353257-342
Acetivibrio alkalicellulosi, DSM 17461 2510059935:NJMEOJLD_00197204-297
2510061767:NJMEOJLD_01981258-344
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943045.1:NEIHKHHH_00721264-350
WP_028308369.1:NEIHKHHH_03091206-311
WP_036935398.1:NEIHKHHH_04875206-311
Ruminococcus albus_7, DSM 20455 WP_013499810.1:HCIAFFOI_03335227-328
WP_013483641.1:HCIAFFOI_03767235-321
WP_013498084.1:HCIAFFOI_01454205-297
WP_013498179.1:HCIAFFOI_01567273-358
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_01580257-343
Ga0065332_112418:GJLLLGJL_02371241-323
Paenibacillus guangzhouensis, KCTC 33171 WP_152392161.1:KDFAKKPF_00608265-351
WP_152396809.1:KDFAKKPF_0606822-75
Clostridium acetobutylicum, ATCC 824 WP_010964611.1:OJAMHIDJ_01357257-342
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695925.1:PROKKA_02127260-346
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00343258-342
FD_25_27, AnGL8 AnGL8_01400263-351
FD_MS_7_1, AnGL28 AnGL28_03479264-349
FD_SO4_25_1_F22, AnGL30 AnGL30_01514263-348
FD_SO4_37_1, AnGL2 AnGL2_02609264-349
FD_YE_25_21, AnGL21 AnGL21_02723267-354
FD_YE_37_3, AnGL26 AnGL26_01909320-405
FD_YE_37_8_2, AnGL3 AnGL3_01796263-348
FD_YE_37_9_2, AnGL4 AnGL4_03197259-345
Syntrophus buswellii, Sbus Sbus_02241264-348
Syntrophomonas curvata, Scurva Scurva_02087259-344
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00662258-342
Syntrophomonas wolfei methylbutyratica, Swm Swm_01744257-343
Swm_02523198-303
Terrisporobacter hibernicus, AnGL54 AnGL54_00842257-343
Sunxiuqinia elliptica, AnGL22 AnGL22_01906320-405
Paraclostridium benzoelyticum, AnGL27 AnGL27_01964257-343
FD-MS-7-8, AnGL9 AnGL9_00782262-347
FD-YE-37-9-3, AnGL29 AnGL29_00455259-345
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01243262-347
PaGL#35_01945211-297
PaGL#35_02693220-304
Syntrophomonas erecta, GB-438 Ga0610585_00343258-342
Variovorax paradoxus, 2u118 PaGL#32_02842150-241
Exiguobacterium mexicanum, AnGL24 AnGL24_01908262-348
Clostridium subterminale, CB-LS10-1 AnGL53_01259256-341
Priestia megaterium, 10L1 PaGL#57_01213332-436
PaGL#57_03008264-350
Fictibacillus phosphorivorans, TY7 PaGL#38_019063-75
PaGL#38_03099263-349
PaGL#38_0392026-80
Syntrophomonas wolfei, saponavida Swsap_02074258-344
Bacillus subtilis, 30VD-1 PaGL#66_01769264-350
Peribacillus frigoritolerans, 30N-5 PaGL#67_02176265-351
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01572257-343
Niallia taxi, AG-1 PaGL#37_05468216-323
PaGL#37_02711265-351
MPOB, Sfum 639701980:Sfum_01257263-349
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_00022258-344
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_01580257-343
Ga0065332_112418:Swol_02371241-323
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14410:Szehn_02413258-344
Syntrophus aciditrophicus, SB SYN_02075263-348
Syntrophus gentianae, DSM8423 Sgen_00028263-348
Mucilaginibacter gossypii, cycad 4 PaGL#42_03946262-347
Ruminococcus callidus, ATCC 27760 Rcal_01405236-320
Rcal_02261188-278
Rcal_0239844-136

PF03796:DnaB_C. DnaB-like helicase C terminal domain

Found 70 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513535.1:LOMAGDGF_03016184-439
Clostridium acetobutylicum, DSM 1731 WP_010966975.1:FHOCHPCF_03775182-433
Acetivibrio alkalicellulosi, DSM 17461 2510061134:NJMEOJLD_01366184-439
Pseudobacteroides cellulosolvens, DSM 2933 WP_036936561.1:NEIHKHHH_03964184-439
Ruminococcus albus_7, DSM 20455 WP_013498311.1:HCIAFFOI_01706197-449
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111265:GJLLLGJL_01239202-445
Paenibacillus guangzhouensis, KCTC 33171 WP_152395833.1:KDFAKKPF_04932187-443
Clostridium acetobutylicum, ATCC 824 WP_010966975.1:OJAMHIDJ_03788182-433
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697160.1:PROKKA_00124184-440
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00705197-440
FD_25_22, AnGL7 AnGL7_00190199-456
FD_25_27, AnGL8 AnGL8_02916198-455
FD_MS_7_1, AnGL28 AnGL28_00659186-447
FD_SO4_25_1_F22, AnGL30 AnGL30_01969202-465
FD_SO4_37_1, AnGL2 AnGL2_03338186-447
FD_YE_25_21, AnGL21 AnGL21_00259198-455
FD_YE_37_3, AnGL26 AnGL26_01722199-459
FD_YE_37_8_2, AnGL3 AnGL3_02718198-461
FD_YE_37_9_2, AnGL4 AnGL4_01868183-438
Syntrophus buswellii, Sbus Sbus_01871188-445
Syntrophomonas curvata, Scurva Scurva_01443194-438
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00309197-440
Syntrophomonas wolfei methylbutyratica, Swm Swm_01400202-445
Terrisporobacter hibernicus, AnGL54 AnGL54_03143182-437
FD-25-21, AnGL21 AnGL21_02429199-456
Sunxiuqinia elliptica, AnGL22 AnGL22_01719199-459
Paraclostridium benzoelyticum, AnGL27 AnGL27_00608182-437
FD-MS-7-8, AnGL9 AnGL9_00964186-447
FD-YE-37-9-3, AnGL29 AnGL29_02593183-438
Methylobacterium radiotolerans, GTSA1 PaGL#34_05863197-484
PaGL#34_06127195-479
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_03580208-474
Syntrophomonas erecta, GB-438 Ga0610585_00705197-440
Variovorax sp., EBFNA2 PaGL#33_02157201-458
Variovorax paradoxus, 2u118 PaGL#32_01871201-459
PaGL#32_02842283-520
Dietzia cinnamea, 55 PaGL#56_03238204-238
379-601
Maridesulfovibrio salexigens, AnGL23 AnGL23_01280205-462
Exiguobacterium mexicanum, AnGL24 AnGL24_00068184-440
Clostridium subterminale, CB-LS10-1 AnGL53_00196179-428
AnGL53_00412178-437
AnGL53_03667182-436
Priestia megaterium, 10L1 PaGL#57_02282184-440
PaGL#57_0077266-182
PaGL#57_01274195-443
Variovorax paradoxus, SPNA7 PaGL#43_01790201-459
Geodermatophilus sp., RDM14 PaGL#36_00094210-243
632-866
Methylorubrum populi, CTY4 PaGL#39_03808197-484
Fictibacillus phosphorivorans, TY7 PaGL#38_04779184-440
Syntrophomonas wolfei, saponavida Swsap_02745198-444
Bacillus subtilis, 30VD-1 PaGL#66_00253184-440
Peribacillus frigoritolerans, 30N-5 PaGL#67_00297184-440
Micromonospora inositola, Utrum1 PaGL#61_00168208-462
Sphingomonas sp., CR2A3 PaGL#62_01107195-491
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_03946182-437
Niallia taxi, AG-1 PaGL#37_03952184-440
MPOB, Sfum 639703956:Sfum_03266186-440
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_01803198-433
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111265:Swol_01239202-445
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_127161:Szehn_01620194-378
Syntrophus aciditrophicus, SB 637860221:SYN_01792188-445
Syntrophus gentianae, DSM8423 Ga0074853_11215:Sgen_01779206-475
Ga0074853_11674:Sgen_02160188-445
Mucilaginibacter gossypii, cycad 4 PaGL#42_02159208-474
Ruminococcus callidus, ATCC 27760 Rcal_01406150-337
Rcal_02363158-218
237-381
Rcal_02728190-442
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