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NJMEOJLD_00197 Locus tags: • Sequence Length: 333

Acetivibrio alkalicellulosi, DSM 17461 Gs0011839

5050100100150150200200250250300300350350
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NJMEOJLD_03830 unknown NJMEOJLD_01141 NJMEOJLD_03831 NJMEOJLD_00196 NJMEOJLD_00197 NJMEOJLD_03832 NJMEOJLD_00198 NJMEOJLD_01142 NJMEOJLD_03833 
    [PF01807]_[PF13154]_[PF13155]

    [48:PF01807]_[125:PF13154]_[204:PF13155]

    [44:IPR002694]_[48:IPR002694]_[125:IPR025054]_[201:IPR034154]

Looking for similar signatures in the working genomes

PF01807:Zn_ribbon_DnaG. CHC2 zinc finger

Found 78 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003520929.1:LOMAGDGF_013685-99
Clostridium acetobutylicum, DSM 1731 WP_010964611.1:FHOCHPCF_013536-102
Acetivibrio alkalicellulosi, DSM 17461 2510059935:NJMEOJLD_0019748-97
2510061767:NJMEOJLD_019816-97
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943045.1:NEIHKHHH_007213-96
Ruminococcus albus_7, DSM 20455 WP_013483298.1:HCIAFFOI_033875-101
WP_013483641.1:HCIAFFOI_037672-78
WP_013483781.1:HCIAFFOI_039212-86
WP_013483884.1:HCIAFFOI_040364-89
WP_028504322.1:HCIAFFOI_0072516-78
WP_013498179.1:HCIAFFOI_015671-96
WP_154662713.1:HCIAFFOI_0257716-78
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_015805-98
Paenibacillus guangzhouensis, KCTC 33171 WP_152392161.1:KDFAKKPF_006088-102
Clostridium acetobutylicum, ATCC 824 WP_010964611.1:OJAMHIDJ_013576-102
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695925.1:PROKKA_021276-100
Syntrophomonas erecta, DSM 16215 OINOEOOJ_003435-97
FD_25_22, AnGL7 AnGL7_033855-101
FD_25_27, AnGL8 AnGL8_014005-100
FD_MS_7_1, AnGL28 AnGL28_034794-100
FD_SO4_25_1_F22, AnGL30 AnGL30_015144-97
FD_SO4_37_1, AnGL2 AnGL2_026094-100
FD_YE_25_21, AnGL21 AnGL21_027236-101
FD_YE_37_3, AnGL26 AnGL26_0190961-156
FD_YE_37_8_2, AnGL3 AnGL3_017963-99
FD_YE_37_9_2, AnGL4 AnGL4_031974-96
Syntrophus buswellii, Sbus Sbus_0011336-83
Sbus_022418-98
Syntrophomonas curvata, Scurva Scurva_020876-96
Syntrophomonas erecta sporosyntropha, Sespor Sespor_006625-97
Syntrophomonas wolfei methylbutyratica, Swm Swm_017445-96
Terrisporobacter hibernicus, AnGL54 AnGL54_0023732-128
AnGL54_008424-97
FD-25-21, AnGL21 AnGL21_028865-102
Sunxiuqinia elliptica, AnGL22 AnGL22_0190661-156
Paraclostridium benzoelyticum, AnGL27 AnGL27_019645-98
FD-MS-7-8, AnGL9 AnGL9_007822-97
FD-YE-37-9-3, AnGL29 AnGL29_004554-96
Methylobacterium radiotolerans, GTSA1 PaGL#34_007414-96
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_012432-96
PaGL#35_019456-100
PaGL#35_024392-96
PaGL#35_0453610-89
Syntrophomonas erecta, GB-438 Ga0610585_003435-97
Variovorax sp., EBFNA2 PaGL#33_020923-97
Variovorax paradoxus, 2u118 PaGL#32_017483-98
Dietzia cinnamea, 55 PaGL#56_011565-101
Maridesulfovibrio salexigens, AnGL23 AnGL23_016192-93
Exiguobacterium mexicanum, AnGL24 AnGL24_019084-97
Clostridium subterminale, CB-LS10-1 AnGL53_012592-96
Priestia megaterium, 10L1 PaGL#57_030085-99
Variovorax paradoxus, SPNA7 PaGL#43_017363-98
Geodermatophilus sp., RDM14 PaGL#36_015789-104
Methylorubrum populi, CTY4 PaGL#39_004654-97
Fictibacillus phosphorivorans, TY7 PaGL#38_00675283-351
PaGL#38_030994-98
Syntrophomonas wolfei, saponavida Swsap_020746-100
Bacillus subtilis, 30VD-1 PaGL#66_017695-99
Peribacillus frigoritolerans, 30N-5 PaGL#67_021766-100
Micromonospora inositola, Utrum1 PaGL#61_0569614-108
Sphingomonas sp., CR2A3 PaGL#62_008444-98
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_042014-81
AnGL54_015724-97
Niallia taxi, AG-1 PaGL#37_027118-101
MPOB, Sfum 639701980:Sfum_012574-91
639704563:Sfum_0388815-81
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_000227-99
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_015805-98
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14410:Szehn_024135-98
Syntrophus aciditrophicus, SB SYN_020757-98
Syntrophus gentianae, DSM8423 Sgen_0327712-85
Sgen_000288-98
Sgen_0165126-97
Mucilaginibacter gossypii, cycad 4 PaGL#42_0075210-85
PaGL#42_039462-97
Ruminococcus callidus, ATCC 27760 Rcal_010774-98
Rcal_018805-86
Rcal_0227423-87

PF13154:DUF3991. Protein of unknown function (DUF3991)

Found 10 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510059935:NJMEOJLD_00197125-200
Pseudobacteroides cellulosolvens, DSM 2933 WP_028308369.1:NEIHKHHH_03091128-197
WP_036935398.1:NEIHKHHH_04875128-197
WP_242857047.1:NEIHKHHH_0553477-146
Ruminococcus albus_7, DSM 20455 WP_013499810.1:HCIAFFOI_03335141-212
WP_013498084.1:HCIAFFOI_01454125-201
Syntrophomonas wolfei methylbutyratica, Swm Swm_02523120-188
Niallia taxi, AG-1 PaGL#37_05468125-178
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13821:Szehn_02133121-186
Ruminococcus callidus, ATCC 27760 Rcal_02261111-183

PF13155:Toprim_2. Toprim-like

Found 65 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003520929.1:LOMAGDGF_01368258-343
Clostridium acetobutylicum, DSM 1731 WP_010964611.1:FHOCHPCF_01353257-342
Acetivibrio alkalicellulosi, DSM 17461 2510059935:NJMEOJLD_00197204-297
2510061767:NJMEOJLD_01981258-344
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943045.1:NEIHKHHH_00721264-350
WP_028308369.1:NEIHKHHH_03091206-311
WP_036935398.1:NEIHKHHH_04875206-311
Ruminococcus albus_7, DSM 20455 WP_013499810.1:HCIAFFOI_03335227-328
WP_013483641.1:HCIAFFOI_03767235-321
WP_013498084.1:HCIAFFOI_01454205-297
WP_013498179.1:HCIAFFOI_01567273-358
Syntrophomonas wolfei subsp. wolfei, Goettingen GJLLLGJL_01580257-343
Ga0065332_112418:GJLLLGJL_02371241-323
Paenibacillus guangzhouensis, KCTC 33171 WP_152392161.1:KDFAKKPF_00608265-351
WP_152396809.1:KDFAKKPF_0606822-75
Clostridium acetobutylicum, ATCC 824 WP_010964611.1:OJAMHIDJ_01357257-342
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695925.1:PROKKA_02127260-346
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00343258-342
FD_25_27, AnGL8 AnGL8_01400263-351
FD_MS_7_1, AnGL28 AnGL28_03479264-349
FD_SO4_25_1_F22, AnGL30 AnGL30_01514263-348
FD_SO4_37_1, AnGL2 AnGL2_02609264-349
FD_YE_25_21, AnGL21 AnGL21_02723267-354
FD_YE_37_3, AnGL26 AnGL26_01909320-405
FD_YE_37_8_2, AnGL3 AnGL3_01796263-348
FD_YE_37_9_2, AnGL4 AnGL4_03197259-345
Syntrophus buswellii, Sbus Sbus_02241264-348
Syntrophomonas curvata, Scurva Scurva_02087259-344
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00662258-342
Syntrophomonas wolfei methylbutyratica, Swm Swm_01744257-343
Swm_02523198-303
Terrisporobacter hibernicus, AnGL54 AnGL54_00842257-343
Sunxiuqinia elliptica, AnGL22 AnGL22_01906320-405
Paraclostridium benzoelyticum, AnGL27 AnGL27_01964257-343
FD-MS-7-8, AnGL9 AnGL9_00782262-347
FD-YE-37-9-3, AnGL29 AnGL29_00455259-345
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01243262-347
PaGL#35_01945211-297
PaGL#35_02693220-304
Syntrophomonas erecta, GB-438 Ga0610585_00343258-342
Variovorax paradoxus, 2u118 PaGL#32_02842150-241
Exiguobacterium mexicanum, AnGL24 AnGL24_01908262-348
Clostridium subterminale, CB-LS10-1 AnGL53_01259256-341
Priestia megaterium, 10L1 PaGL#57_01213332-436
PaGL#57_03008264-350
Fictibacillus phosphorivorans, TY7 PaGL#38_019063-75
PaGL#38_03099263-349
PaGL#38_0392026-80
Syntrophomonas wolfei, saponavida Swsap_02074258-344
Bacillus subtilis, 30VD-1 PaGL#66_01769264-350
Peribacillus frigoritolerans, 30N-5 PaGL#67_02176265-351
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01572257-343
Niallia taxi, AG-1 PaGL#37_05468216-323
PaGL#37_02711265-351
MPOB, Sfum 639701980:Sfum_01257263-349
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_00022258-344
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Swol_01580257-343
Ga0065332_112418:Swol_02371241-323
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14410:Szehn_02413258-344
Syntrophus aciditrophicus, SB SYN_02075263-348
Syntrophus gentianae, DSM8423 Sgen_00028263-348
Mucilaginibacter gossypii, cycad 4 PaGL#42_03946262-347
Ruminococcus callidus, ATCC 27760 Rcal_01405236-320
Rcal_02261188-278
Rcal_0239844-136
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