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PaGL#56_01421 Locus tags: • Sequence Length: 803

Dietzia cinnamea, 55 Batch3_genome_fasta/D.cinnamea

5050100100150150200200250250300300350350400400450450500500550550600600650650700700750750800800850850
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PaGL#56_01419 unknown PaGL#56_01421 PaGL#56_01422 PaGL#56_01425 
    [PF07517]_[PF01043]_[PF07516]

    [8:PF07517]_[236:PF01043]_[650:PF07516]

    [3:IPR014018]_[6:IPR011115]_[8:IPR011115]_[58:IPR027417]_[59:IPR000185]_[85:IPR014001]_[97:IPR000185]_[166:IPR000185]_[223:IPR011130]_[236:IPR011130]_[236:IPR036670]_[317:IPR000185]_[354:IPR000185]_[391:IPR000185]_[395:IPR027417]_[398:IPR044722]_[415:IPR001650]_[577:IPR036266]_[650:IPR011116]

Looking for similar signatures in the working genomes

PF07517:SecA_DEAD. SecA DEAD-like domain

Found 68 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518239.1:LOMAGDGF_008985-398
Clostridium acetobutylicum, DSM 1731 WP_010966131.1:FHOCHPCF_028923-382
Acetivibrio alkalicellulosi, DSM 17461 2510060978:NJMEOJLD_0121317-382
2510063635:NJMEOJLD_038135-398
Pseudobacteroides cellulosolvens, DSM 2933 WP_036944500.1:NEIHKHHH_0250117-388
WP_036944577.1:NEIHKHHH_0283221-386
WP_036944683.1:NEIHKHHH_035617-401
Ruminococcus albus_7, DSM 20455 WP_013496781.1:HCIAFFOI_000184-397
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11263:GJLLLGJL_002539-381
Paenibacillus guangzhouensis, KCTC 33171 WP_152396382.1:KDFAKKPF_055575-383
Clostridium acetobutylicum, ATCC 824 WP_010966131.1:OJAMHIDJ_029013-382
Ruminiclostridium herbifermentans MA18, DSM 109966 PROKKA_026057-401
Syntrophomonas erecta, DSM 16215 OINOEOOJ_020218-381
FD_25_22, AnGL7 AnGL7_010086-403
FD_25_27, AnGL8 AnGL8_028776-402
FD_MS_7_1, AnGL28 AnGL28_004754-503
FD_SO4_25_1_F22, AnGL30 AnGL30_004307-584
FD_SO4_37_1, AnGL2 AnGL2_031544-503
FD_YE_25_21, AnGL21 AnGL21_026666-402
FD_YE_37_3, AnGL26 AnGL26_041428-588
FD_YE_37_8_2, AnGL3 AnGL3_002078-587
FD_YE_37_9_2, AnGL4 AnGL4_024364-402
Syntrophus buswellii, Sbus Sbus_016715-384
Syntrophomonas curvata, Scurva Scurva_0030119-392
Syntrophomonas erecta sporosyntropha, Sespor Sespor_015518-381
Syntrophomonas wolfei methylbutyratica, Swm Swm_002289-381
Terrisporobacter hibernicus, AnGL54 AnGL54_030164-400
FD-25-21, AnGL21 AnGL21_015446-403
Sunxiuqinia elliptica, AnGL22 AnGL22_041388-588
Paraclostridium benzoelyticum, AnGL27 AnGL27_004414-381
FD-MS-7-8, AnGL9 AnGL9_003314-503
FD-YE-37-9-3, AnGL29 AnGL29_031614-402
Methylobacterium radiotolerans, GTSA1 PaGL#34_009106-388
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_063485-584
Syntrophomonas erecta, GB-438 Ga0610585_020218-381
Variovorax sp., EBFNA2 PaGL#33_012796-406
Variovorax paradoxus, 2u118 PaGL#32_043206-406
Dietzia cinnamea, 55 PaGL#56_009605-381
PaGL#56_014218-377
Maridesulfovibrio salexigens, AnGL23 AnGL23_030466-383
Exiguobacterium mexicanum, AnGL24 AnGL24_021337-380
AnGL24_021917-382
Clostridium subterminale, CB-LS10-1 AnGL53_002924-381
Priestia megaterium, 10L1 PaGL#57_004126-379
PaGL#57_024515-382
Variovorax paradoxus, SPNA7 PaGL#43_044816-406
Geodermatophilus sp., RDM14 PaGL#36_035844-380
Methylorubrum populi, CTY4 PaGL#39_013296-388
PaGL#39_0214163-455
Fictibacillus phosphorivorans, TY7 PaGL#38_041504-382
PaGL#38_042045-382
Syntrophomonas wolfei, saponavida Swsap_013617-381
Bacillus subtilis, 30VD-1 PaGL#66_007745-382
Peribacillus frigoritolerans, 30N-5 PaGL#67_005085-382
PaGL#67_005505-382
Micromonospora inositola, Utrum1 PaGL#61_012424-386
PaGL#61_0279623-374
Sphingomonas sp., CR2A3 PaGL#62_003036-388
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_038194-400
Niallia taxi, AG-1 PaGL#37_034635-382
MPOB, Sfum 639701969:Sfum_012465-383
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10592:Spalm_009691-335
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11263:Swol_002539-381
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14246:Szehn_023918-381
Syntrophus aciditrophicus, SB 637859916:SYN_015045-384
Syntrophus gentianae, DSM8423 Ga0074853_12612:Sgen_026775-384
Mucilaginibacter gossypii, cycad 4 PaGL#42_058055-584
Ruminococcus callidus, ATCC 27760 Rcal_020044-399

PF01043:SecA_PP_bind. SecA preprotein cross-linking domain

Found 68 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518239.1:LOMAGDGF_00898230-354
Clostridium acetobutylicum, DSM 1731 WP_010966131.1:FHOCHPCF_02892229-338
Acetivibrio alkalicellulosi, DSM 17461 2510060978:NJMEOJLD_01213238-338
2510063635:NJMEOJLD_03813230-354
Pseudobacteroides cellulosolvens, DSM 2933 WP_036944500.1:NEIHKHHH_02501240-344
WP_036944577.1:NEIHKHHH_02832240-343
WP_036944683.1:NEIHKHHH_03561233-357
Ruminococcus albus_7, DSM 20455 WP_013496781.1:HCIAFFOI_00018229-353
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11263:GJLLLGJL_00253231-337
Paenibacillus guangzhouensis, KCTC 33171 WP_152396382.1:KDFAKKPF_05557230-339
Clostridium acetobutylicum, ATCC 824 WP_010966131.1:OJAMHIDJ_02901229-338
Ruminiclostridium herbifermentans MA18, DSM 109966 PROKKA_02605232-357
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02021231-337
FD_25_22, AnGL7 AnGL7_01008233-359
FD_25_27, AnGL8 AnGL8_02877231-358
FD_MS_7_1, AnGL28 AnGL28_00475325-460
FD_SO4_25_1_F22, AnGL30 AnGL30_00430398-540
FD_SO4_37_1, AnGL2 AnGL2_03154325-460
FD_YE_25_21, AnGL21 AnGL21_02666231-358
FD_YE_37_3, AnGL26 AnGL26_04142401-544
FD_YE_37_8_2, AnGL3 AnGL3_00207401-543
FD_YE_37_9_2, AnGL4 AnGL4_02436229-358
Syntrophus buswellii, Sbus Sbus_01671231-340
Syntrophomonas curvata, Scurva Scurva_00301242-348
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01551231-337
Syntrophomonas wolfei methylbutyratica, Swm Swm_00228231-337
Terrisporobacter hibernicus, AnGL54 AnGL54_03016229-356
FD-25-21, AnGL21 AnGL21_01544233-359
Sunxiuqinia elliptica, AnGL22 AnGL22_04138401-544
Paraclostridium benzoelyticum, AnGL27 AnGL27_00441229-337
FD-MS-7-8, AnGL9 AnGL9_00331321-460
FD-YE-37-9-3, AnGL29 AnGL29_03161229-358
Methylobacterium radiotolerans, GTSA1 PaGL#34_00910231-345
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_06348399-540
Syntrophomonas erecta, GB-438 Ga0610585_02021231-337
Variovorax sp., EBFNA2 PaGL#33_01279231-362
Variovorax paradoxus, 2u118 PaGL#32_04320231-362
Dietzia cinnamea, 55 PaGL#56_00960229-338
PaGL#56_01421236-337
Maridesulfovibrio salexigens, AnGL23 AnGL23_03046231-340
Exiguobacterium mexicanum, AnGL24 AnGL24_02133238-337
AnGL24_02191229-338
Clostridium subterminale, CB-LS10-1 AnGL53_00292229-337
Priestia megaterium, 10L1 PaGL#57_00412226-335
PaGL#57_02451229-338
Variovorax paradoxus, SPNA7 PaGL#43_04481231-362
Geodermatophilus sp., RDM14 PaGL#36_03584228-337
Methylorubrum populi, CTY4 PaGL#39_01329231-345
PaGL#39_02141301-411
Fictibacillus phosphorivorans, TY7 PaGL#38_04150229-338
PaGL#38_04204230-338
Syntrophomonas wolfei, saponavida Swsap_01361231-337
Bacillus subtilis, 30VD-1 PaGL#66_00774229-338
Peribacillus frigoritolerans, 30N-5 PaGL#67_00508230-338
PaGL#67_00550229-338
Micromonospora inositola, Utrum1 PaGL#61_01242230-342
PaGL#61_02796233-336
Sphingomonas sp., CR2A3 PaGL#62_00303231-345
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_03819229-356
Niallia taxi, AG-1 PaGL#37_03463229-338
MPOB, Sfum 639701969:Sfum_01246231-340
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10592:Spalm_00969185-291
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11263:Swol_00253231-337
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14246:Szehn_02391231-337
Syntrophus aciditrophicus, SB 637859916:SYN_01504231-340
Syntrophus gentianae, DSM8423 Ga0074853_12612:Sgen_02677231-340
Mucilaginibacter gossypii, cycad 4 PaGL#42_05805399-540
Ruminococcus callidus, ATCC 27760 Rcal_02004254-355

PF07516:SecA_SW. SecA Wing and Scaffold domain

Found 70 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518239.1:LOMAGDGF_00898640-852
Clostridium acetobutylicum, DSM 1731 WP_010966131.1:FHOCHPCF_02892567-779
Acetivibrio alkalicellulosi, DSM 17461 2510060978:NJMEOJLD_01213573-626
632-720
2510063635:NJMEOJLD_03813640-852
Pseudobacteroides cellulosolvens, DSM 2933 WP_036944500.1:NEIHKHHH_02501579-636
642-722
WP_036944577.1:NEIHKHHH_02832580-632
639-728
WP_036944683.1:NEIHKHHH_03561643-855
Ruminococcus albus_7, DSM 20455 WP_013496781.1:HCIAFFOI_00018639-851
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11263:GJLLLGJL_00253566-777
Paenibacillus guangzhouensis, KCTC 33171 WP_152396382.1:KDFAKKPF_05557568-778
Clostridium acetobutylicum, ATCC 824 WP_010966131.1:OJAMHIDJ_02901567-779
Ruminiclostridium herbifermentans MA18, DSM 109966 PROKKA_02605643-855
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02021566-777
FD_25_22, AnGL7 AnGL7_01008617-831
FD_25_27, AnGL8 AnGL8_02877616-830
FD_MS_7_1, AnGL28 AnGL28_00475719-924
FD_SO4_25_1_F22, AnGL30 AnGL30_00430770-1016
FD_SO4_37_1, AnGL2 AnGL2_03154719-924
FD_YE_25_21, AnGL21 AnGL21_02666615-828
FD_YE_37_3, AnGL26 AnGL26_04142774-1023
FD_YE_37_8_2, AnGL3 AnGL3_00207773-1022
FD_YE_37_9_2, AnGL4 AnGL4_02436587-800
Syntrophus buswellii, Sbus Sbus_01671569-778
Syntrophomonas curvata, Scurva Scurva_00301577-788
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01551566-777
Syntrophomonas wolfei methylbutyratica, Swm Swm_00228566-777
Terrisporobacter hibernicus, AnGL54 AnGL54_03016646-853
FD-25-21, AnGL21 AnGL21_01544617-831
Sunxiuqinia elliptica, AnGL22 AnGL22_04138774-1023
Paraclostridium benzoelyticum, AnGL27 AnGL27_00441627-833
FD-MS-7-8, AnGL9 AnGL9_00331719-924
FD-YE-37-9-3, AnGL29 AnGL29_03161587-800
Methylobacterium radiotolerans, GTSA1 PaGL#34_00910650-861
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_06348770-1019
Syntrophomonas erecta, GB-438 Ga0610585_02021566-777
Variovorax sp., EBFNA2 PaGL#33_01279627-840
Variovorax paradoxus, 2u118 PaGL#32_04320627-840
Dietzia cinnamea, 55 PaGL#56_00960611-832
PaGL#56_01421650-711
Maridesulfovibrio salexigens, AnGL23 AnGL23_03046569-775
Exiguobacterium mexicanum, AnGL24 AnGL24_02133569-776
AnGL24_02191567-778
Clostridium subterminale, CB-LS10-1 AnGL53_00292566-777
Priestia megaterium, 10L1 PaGL#57_00412565-775
PaGL#57_02451567-778
Variovorax paradoxus, SPNA7 PaGL#43_04481627-840
Geodermatophilus sp., RDM14 PaGL#36_03584610-827
Methylorubrum populi, CTY4 PaGL#39_01329650-861
Fictibacillus phosphorivorans, TY7 PaGL#38_04150567-778
PaGL#38_04204577-775
Syntrophomonas wolfei, saponavida Swsap_01361566-777
Bacillus subtilis, 30VD-1 PaGL#66_00774567-778
Peribacillus frigoritolerans, 30N-5 PaGL#67_00508574-774
PaGL#67_00550567-777
Micromonospora inositola, Utrum1 PaGL#61_01242615-829
PaGL#61_02796634-711
Sphingomonas sp., CR2A3 PaGL#62_00303610-820
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_03819646-853
Niallia taxi, AG-1 PaGL#37_03463567-778
MPOB, Sfum 639701969:Sfum_01246569-781
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10592:Spalm_00969520-731
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11263:Swol_00253566-777
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14246:Szehn_02391566-777
Syntrophus aciditrophicus, SB 637859916:SYN_01504569-779
Syntrophus gentianae, DSM8423 Ga0074853_12612:Sgen_02677569-778
Mucilaginibacter gossypii, cycad 4 PaGL#42_05805770-1019
Ruminococcus callidus, ATCC 27760 Rcal_02004641-855
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